RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NISCHQ9Y2I1 1504 aa43.66■■■■■ 4.58
TSSC4-210ENST00000496468 CCDC180Q9P1Z9 1646 aa38.68■■■■□ 3.78
TSSC4-210ENST00000496468 ABCC9O60706 1549 aa37.21■■■■□ 3.55
TSSC4-210ENST00000496468 ZCCHC6Q5VYS8 1495 aaKnown RBP36.55■■■■□ 3.44
TSSC4-210ENST00000496468 DCAF1Q9Y4B6 1507 aa36.18■■■■□ 3.38
TSSC4-210ENST00000496468 NACADO15069 1562 aa36.16■■■■□ 3.38
TSSC4-210ENST00000496468 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
TSSC4-210ENST00000496468 MYO15BQ96JP2 1530 aa36.11■■■■□ 3.37
TSSC4-210ENST00000496468 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
TSSC4-210ENST00000496468 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
TSSC4-210ENST00000496468 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.24
TSSC4-210ENST00000496468 BICRAQ9NZM4 1560 aa34.95■■■■□ 3.18
TSSC4-210ENST00000496468 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
TSSC4-210ENST00000496468 PABPN1Q86U42 306 aaKnown RBP eCLIP34.78■■■■□ 3.16
TSSC4-210ENST00000496468 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
TSSC4-210ENST00000496468 CECR2Q9BXF3 1484 aa33.91■■■■□ 3.02
TSSC4-210ENST00000496468 BAZ1AQ9NRL2 1556 aaPredicted RBP33.85■■■■□ 3.01
TSSC4-210ENST00000496468 SMARCA4P51532 1647 aa33.82■■■■□ 3.01
TSSC4-210ENST00000496468 CC2D2AQ9P2K1 1620 aa33.72■■■□□ 2.99
TSSC4-210ENST00000496468 MROH2BQ7Z745 1585 aa33.66■■■□□ 2.98
TSSC4-210ENST00000496468 DNAJC5BQ9UF47 199 aa33.48■■■□□ 2.95
TSSC4-210ENST00000496468 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
TSSC4-210ENST00000496468 PEG3Q9GZU2 1588 aa33.46■■■□□ 2.95
TSSC4-210ENST00000496468 RSF1Q96T23 1441 aaPredicted RBP33.44■■■□□ 2.94
TSSC4-210ENST00000496468 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
TSSC4-210ENST00000496468 WIZO95785 1651 aa33.36■■■□□ 2.93
TSSC4-210ENST00000496468 HMGXB3Q12766 1538 aa33.29■■■□□ 2.92
TSSC4-210ENST00000496468 NCAPD3P42695 1498 aa33.29■■■□□ 2.92
TSSC4-210ENST00000496468 BAZ1BQ9UIG0 1483 aaKnown RBP33.24■■■□□ 2.91
TSSC4-210ENST00000496468 TOP2AP11388 1531 aaKnown RBP33.07■■■□□ 2.88
TSSC4-210ENST00000496468 SUPT5HO00267 1087 aaKnown RBP32.95■■■□□ 2.87
TSSC4-210ENST00000496468 CCDC88BA6NC98 1476 aa32.59■■■□□ 2.81
TSSC4-210ENST00000496468 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
TSSC4-210ENST00000496468 NESP48681 1621 aa32.36■■■□□ 2.77
TSSC4-210ENST00000496468 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
TSSC4-210ENST00000496468 CFTRP13569 1480 aa32.3■■■□□ 2.76
TSSC4-210ENST00000496468 PRDM2Q13029 1718 aa32.26■■■□□ 2.76
TSSC4-210ENST00000496468 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
TSSC4-210ENST00000496468 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
TSSC4-210ENST00000496468 ERCC6Q03468 1493 aa32.08■■■□□ 2.73
TSSC4-210ENST00000496468 FANCD2Q9BXW9 1451 aa32.04■■■□□ 2.72
TSSC4-210ENST00000496468 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
TSSC4-210ENST00000496468 THOC2Q8NI27 1593 aaKnown RBP31.85■■■□□ 2.69
TSSC4-210ENST00000496468 MRC2Q9UBG0 1479 aa31.81■■■□□ 2.68
TSSC4-210ENST00000496468 WDR62O43379 1518 aa31.7■■■□□ 2.67
TSSC4-210ENST00000496468 URB2Q14146 1524 aaKnown RBP31.69■■■□□ 2.66
TSSC4-210ENST00000496468 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.66
TSSC4-210ENST00000496468 ABCC8Q09428 1581 aa31.63■■■□□ 2.65
TSSC4-210ENST00000496468 TOPBP1Q92547 1522 aa31.59■■■□□ 2.65
TSSC4-210ENST00000496468 CUX1P39880 1505 aa31.57■■■□□ 2.64
TSSC4-210ENST00000496468 WRNQ14191 1432 aaPredicted RBP eCLIP31.55■■■□□ 2.64
TSSC4-210ENST00000496468 CUX2O14529 1486 aa31.52■■■□□ 2.64
TSSC4-210ENST00000496468 SYNJ1O43426 1573 aa31.5■■■□□ 2.63
TSSC4-210ENST00000496468 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
TSSC4-210ENST00000496468 TOP2BQ02880 1626 aa31.47■■■□□ 2.63
TSSC4-210ENST00000496468 FGD5Q6ZNL6 1462 aa31.38■■■□□ 2.61
TSSC4-210ENST00000496468 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
TSSC4-210ENST00000496468 IFT140Q96RY7 1462 aa31.26■■■□□ 2.59
TSSC4-210ENST00000496468 TARBP1Q13395 1621 aaKnown RBP31.22■■■□□ 2.59
TSSC4-210ENST00000496468 SOGA1O94964 1423 aa31.18■■■□□ 2.58
TSSC4-210ENST00000496468 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
TSSC4-210ENST00000496468 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
TSSC4-210ENST00000496468 TRIM41Q8WV44 630 aa31.1■■■□□ 2.57
TSSC4-210ENST00000496468 ABCA10Q8WWZ4 1543 aa31.09■■■□□ 2.57
TSSC4-210ENST00000496468 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
TSSC4-210ENST00000496468 CHIC1Q5VXU3 224 aa31.05■■■□□ 2.56
TSSC4-210ENST00000496468 ZNF608Q9ULD9 1512 aaPredicted RBP31.04■■■□□ 2.56
TSSC4-210ENST00000496468 ABCA5Q8WWZ7 1642 aa30.98■■■□□ 2.55
TSSC4-210ENST00000496468 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
TSSC4-210ENST00000496468 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.54
TSSC4-210ENST00000496468 PBRM1Q86U86 1689 aa30.89■■■□□ 2.54
TSSC4-210ENST00000496468 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
TSSC4-210ENST00000496468 KIF27Q86VH2 1401 aa30.84■■■□□ 2.53
TSSC4-210ENST00000496468 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
TSSC4-210ENST00000496468 ERICH3Q5RHP9 1530 aa30.75■■■□□ 2.51
TSSC4-210ENST00000496468 SNAPC4Q5SXM2 1469 aa30.72■■■□□ 2.51
TSSC4-210ENST00000496468 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.5
TSSC4-210ENST00000496468 RUSC2Q8N2Y8 1516 aa30.68■■■□□ 2.5
TSSC4-210ENST00000496468 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
TSSC4-210ENST00000496468 EEA1Q15075 1411 aa30.64■■■□□ 2.5
TSSC4-210ENST00000496468 CUL7Q14999 1698 aa30.64■■■□□ 2.5
TSSC4-210ENST00000496468 IGF1RP08069 1367 aa30.56■■■□□ 2.48
TSSC4-210ENST00000496468 CHD1O14646 1710 aa30.55■■■□□ 2.48
TSSC4-210ENST00000496468 SYNJ2O15056 1496 aa30.55■■■□□ 2.48
TSSC4-210ENST00000496468 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
TSSC4-210ENST00000496468 FAM9AQ8IZU1 332 aaPredicted RBP30.44■■■□□ 2.46
TSSC4-210ENST00000496468 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
TSSC4-210ENST00000496468 GRIN2AQ12879 1464 aa30.43■■■□□ 2.46
TSSC4-210ENST00000496468 FBLN2P98095 1184 aa30.4■■■□□ 2.46
TSSC4-210ENST00000496468 CHMP7Q8WUX9 453 aaPredicted RBP30.4■■■□□ 2.46
TSSC4-210ENST00000496468 CSRNP3Q8WYN3 585 aa30.39■■■□□ 2.46
TSSC4-210ENST00000496468 PRXQ9BXM0 1461 aa30.38■■■□□ 2.45
TSSC4-210ENST00000496468 RAPGEF2Q9Y4G8 1499 aa30.37■■■□□ 2.45
TSSC4-210ENST00000496468 KIF21BO75037 1637 aa30.34■■■□□ 2.45
TSSC4-210ENST00000496468 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
TSSC4-210ENST00000496468 NUP160Q12769 1436 aa30.25■■■□□ 2.43
TSSC4-210ENST00000496468 CLASP1Q7Z460 1538 aa30.19■■■□□ 2.42
TSSC4-210ENST00000496468 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
TSSC4-210ENST00000496468 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
TSSC4-210ENST00000496468 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms