RNA–Protein interactions for RNA: ENST00000496345.1

GSE1-211, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-211ENST00000496345 NISCHQ9Y2I1 1504 aa30.25■■■□□ 2.43
GSE1-211ENST00000496345 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
GSE1-211ENST00000496345 ABCC9O60706 1549 aa27■■□□□ 1.91
GSE1-211ENST00000496345 RB1CC1Q8TDY2 1594 aa25.68■■□□□ 1.7
GSE1-211ENST00000496345 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
GSE1-211ENST00000496345 NACADO15069 1562 aa25.52■■□□□ 1.68
GSE1-211ENST00000496345 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
GSE1-211ENST00000496345 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
GSE1-211ENST00000496345 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
GSE1-211ENST00000496345 UNC13AQ9UPW8 1703 aa25.09■■□□□ 1.61
GSE1-211ENST00000496345 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
GSE1-211ENST00000496345 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
GSE1-211ENST00000496345 DCAF1Q9Y4B6 1507 aa24.93■■□□□ 1.58
GSE1-211ENST00000496345 SCRIBQ14160 1630 aa24.71■■□□□ 1.55
GSE1-211ENST00000496345 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
GSE1-211ENST00000496345 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
GSE1-211ENST00000496345 EIF4G1Q04637 1599 aaKnown RBP24.32■■□□□ 1.48
GSE1-211ENST00000496345 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
GSE1-211ENST00000496345 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
GSE1-211ENST00000496345 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
GSE1-211ENST00000496345 SMARCA4P51532 1647 aa23.55■■□□□ 1.36
GSE1-211ENST00000496345 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
GSE1-211ENST00000496345 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
GSE1-211ENST00000496345 HMGXB3Q12766 1538 aa23.39■■□□□ 1.34
GSE1-211ENST00000496345 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
GSE1-211ENST00000496345 BAZ1BQ9UIG0 1483 aaKnown RBP23.34■■□□□ 1.33
GSE1-211ENST00000496345 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
GSE1-211ENST00000496345 ERCC6Q03468 1493 aa23.27■■□□□ 1.32
GSE1-211ENST00000496345 NESP48681 1621 aa23.24■■□□□ 1.31
GSE1-211ENST00000496345 CUX2O14529 1486 aa23.12■■□□□ 1.29
GSE1-211ENST00000496345 WIZO95785 1651 aa23.06■■□□□ 1.28
GSE1-211ENST00000496345 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
GSE1-211ENST00000496345 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
GSE1-211ENST00000496345 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
GSE1-211ENST00000496345 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
GSE1-211ENST00000496345 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
GSE1-211ENST00000496345 THOC2Q8NI27 1593 aaKnown RBP22.89■■□□□ 1.26
GSE1-211ENST00000496345 KIF21AQ7Z4S6 1674 aa22.88■■□□□ 1.25
GSE1-211ENST00000496345 TOP2AP11388 1531 aaKnown RBP22.74■■□□□ 1.23
GSE1-211ENST00000496345 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
GSE1-211ENST00000496345 CFTRP13569 1480 aa22.66■■□□□ 1.22
GSE1-211ENST00000496345 FANCD2Q9BXW9 1451 aa22.65■■□□□ 1.22
GSE1-211ENST00000496345 CEP164Q9UPV0 1460 aa22.64■■□□□ 1.21
GSE1-211ENST00000496345 WDR62O43379 1518 aa22.62■■□□□ 1.21
GSE1-211ENST00000496345 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
GSE1-211ENST00000496345 URB2Q14146 1524 aaKnown RBP22.46■■□□□ 1.19
GSE1-211ENST00000496345 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
GSE1-211ENST00000496345 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
GSE1-211ENST00000496345 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
GSE1-211ENST00000496345 OSCARQ8IYS5 282 aa22.18■■□□□ 1.14
GSE1-211ENST00000496345 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
GSE1-211ENST00000496345 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
GSE1-211ENST00000496345 TRIM41Q8WV44 630 aa22.14■■□□□ 1.13
GSE1-211ENST00000496345 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
GSE1-211ENST00000496345 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
GSE1-211ENST00000496345 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.124e-8■■■■□ 24.5
GSE1-211ENST00000496345 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
GSE1-211ENST00000496345 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
GSE1-211ENST00000496345 TARBP1Q13395 1621 aaKnown RBP22■■□□□ 1.11
GSE1-211ENST00000496345 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
GSE1-211ENST00000496345 SOGA1O94964 1423 aa21.95■■□□□ 1.1
GSE1-211ENST00000496345 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
GSE1-211ENST00000496345 CUX1P39880 1505 aa21.91■■□□□ 1.1
GSE1-211ENST00000496345 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
GSE1-211ENST00000496345 FBLN2P98095 1184 aa21.88■■□□□ 1.09
GSE1-211ENST00000496345 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.08
GSE1-211ENST00000496345 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.08
GSE1-211ENST00000496345 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.08
GSE1-211ENST00000496345 CHD1O14646 1710 aa21.82■■□□□ 1.08
GSE1-211ENST00000496345 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
GSE1-211ENST00000496345 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
GSE1-211ENST00000496345 WDR97A6NE52 1622 aa21.71■■□□□ 1.07
GSE1-211ENST00000496345 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
GSE1-211ENST00000496345 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
GSE1-211ENST00000496345 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
GSE1-211ENST00000496345 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
GSE1-211ENST00000496345 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
GSE1-211ENST00000496345 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
GSE1-211ENST00000496345 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
GSE1-211ENST00000496345 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
GSE1-211ENST00000496345 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
GSE1-211ENST00000496345 ARAP1Q96P48 1450 aa21.58■■□□□ 1.05
GSE1-211ENST00000496345 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.04
GSE1-211ENST00000496345 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
GSE1-211ENST00000496345 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
GSE1-211ENST00000496345 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
GSE1-211ENST00000496345 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
GSE1-211ENST00000496345 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
GSE1-211ENST00000496345 ADAMTS12P58397 1594 aa21.41■■□□□ 1.02
GSE1-211ENST00000496345 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
GSE1-211ENST00000496345 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
GSE1-211ENST00000496345 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
GSE1-211ENST00000496345 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
GSE1-211ENST00000496345 NUP160Q12769 1436 aa21.34■■□□□ 1.01
GSE1-211ENST00000496345 ERCC6L2Q5T890 1561 aa21.31■■□□□ 1
GSE1-211ENST00000496345 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
GSE1-211ENST00000496345 IGF1RP08069 1367 aa21.2■□□□□ 0.98
GSE1-211ENST00000496345 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
GSE1-211ENST00000496345 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
GSE1-211ENST00000496345 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms