RNA–Protein interactions for RNA: ENST00000496311.1

TTC12-213, Transcript of tetratricopeptide repeat domain 12, humanhuman

TSL 4

Gene TTC12, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC12-213ENST00000496311 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
TTC12-213ENST00000496311 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
TTC12-213ENST00000496311 ABCC9O60706 1549 aa17.72■□□□□ 0.43
TTC12-213ENST00000496311 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
TTC12-213ENST00000496311 NACADO15069 1562 aa16.86■□□□□ 0.29
TTC12-213ENST00000496311 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
TTC12-213ENST00000496311 MYO15BQ96JP2 1530 aa16.72■□□□□ 0.27
TTC12-213ENST00000496311 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
TTC12-213ENST00000496311 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
TTC12-213ENST00000496311 PABPN1Q86U42 306 aaKnown RBP eCLIP16.53■□□□□ 0.24
TTC12-213ENST00000496311 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
TTC12-213ENST00000496311 BICRAQ9NZM4 1560 aa16.41■□□□□ 0.22
TTC12-213ENST00000496311 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
TTC12-213ENST00000496311 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
TTC12-213ENST00000496311 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
TTC12-213ENST00000496311 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
TTC12-213ENST00000496311 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
TTC12-213ENST00000496311 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
TTC12-213ENST00000496311 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
TTC12-213ENST00000496311 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
TTC12-213ENST00000496311 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
TTC12-213ENST00000496311 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
TTC12-213ENST00000496311 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
TTC12-213ENST00000496311 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
TTC12-213ENST00000496311 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
TTC12-213ENST00000496311 BAZ1BQ9UIG0 1483 aaKnown RBP15.39■□□□□ 0.05
TTC12-213ENST00000496311 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
TTC12-213ENST00000496311 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
TTC12-213ENST00000496311 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
TTC12-213ENST00000496311 CUX2O14529 1486 aa15.29■□□□□ 0.04
TTC12-213ENST00000496311 NESP48681 1621 aa15.24■□□□□ 0.03
TTC12-213ENST00000496311 LAMC3Q9Y6N6 1575 aa15.19■□□□□ 0.02
TTC12-213ENST00000496311 PDS5BQ9NTI5 1447 aa15.15■□□□□ 0.02
TTC12-213ENST00000496311 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
TTC12-213ENST00000496311 WIZO95785 1651 aa15.1■□□□□ 0.01
TTC12-213ENST00000496311 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
TTC12-213ENST00000496311 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
TTC12-213ENST00000496311 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
TTC12-213ENST00000496311 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
TTC12-213ENST00000496311 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
TTC12-213ENST00000496311 CFTRP13569 1480 aa14.97□□□□□ -0.01
TTC12-213ENST00000496311 WDR62O43379 1518 aa14.93□□□□□ -0.02
TTC12-213ENST00000496311 CEP164Q9UPV0 1460 aa14.93□□□□□ -0.02
TTC12-213ENST00000496311 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
TTC12-213ENST00000496311 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
TTC12-213ENST00000496311 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
TTC12-213ENST00000496311 ABCC8Q09428 1581 aa14.67□□□□□ -0.06
TTC12-213ENST00000496311 IFT140Q96RY7 1462 aa14.65□□□□□ -0.06
TTC12-213ENST00000496311 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
TTC12-213ENST00000496311 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
TTC12-213ENST00000496311 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
TTC12-213ENST00000496311 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
TTC12-213ENST00000496311 ZNF608Q9ULD9 1512 aaPredicted RBP14.57□□□□□ -0.08
TTC12-213ENST00000496311 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
TTC12-213ENST00000496311 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
TTC12-213ENST00000496311 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
TTC12-213ENST00000496311 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
TTC12-213ENST00000496311 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.09
TTC12-213ENST00000496311 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
TTC12-213ENST00000496311 SOGA1O94964 1423 aa14.45□□□□□ -0.1
TTC12-213ENST00000496311 RAD54L2Q9Y4B4 1467 aa14.43□□□□□ -0.1
TTC12-213ENST00000496311 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
TTC12-213ENST00000496311 CUX1P39880 1505 aa14.41□□□□□ -0.1
TTC12-213ENST00000496311 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
TTC12-213ENST00000496311 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
TTC12-213ENST00000496311 FBLN2P98095 1184 aa14.35□□□□□ -0.11
TTC12-213ENST00000496311 ARHGEF11O15085 1522 aa14.34□□□□□ -0.11
TTC12-213ENST00000496311 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
TTC12-213ENST00000496311 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
TTC12-213ENST00000496311 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
TTC12-213ENST00000496311 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
TTC12-213ENST00000496311 SNAPC4Q5SXM2 1469 aa14.32□□□□□ -0.12
TTC12-213ENST00000496311 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
TTC12-213ENST00000496311 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
TTC12-213ENST00000496311 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
TTC12-213ENST00000496311 SYNJ2O15056 1496 aa14.27□□□□□ -0.12
TTC12-213ENST00000496311 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
TTC12-213ENST00000496311 CHD1O14646 1710 aa14.27□□□□□ -0.13
TTC12-213ENST00000496311 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
TTC12-213ENST00000496311 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
TTC12-213ENST00000496311 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
TTC12-213ENST00000496311 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
TTC12-213ENST00000496311 ABCA5Q8WWZ7 1642 aa14.21□□□□□ -0.13
TTC12-213ENST00000496311 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
TTC12-213ENST00000496311 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
TTC12-213ENST00000496311 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
TTC12-213ENST00000496311 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
TTC12-213ENST00000496311 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
TTC12-213ENST00000496311 FHAD1B1AJZ9 1412 aa14.12□□□□□ -0.15
TTC12-213ENST00000496311 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
TTC12-213ENST00000496311 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
TTC12-213ENST00000496311 NUP160Q12769 1436 aa14.09□□□□□ -0.15
TTC12-213ENST00000496311 TRHP20396 242 aaPredicted RBP14.04□□□□□ -0.16
TTC12-213ENST00000496311 CEP170Q5SW79 1584 aa14.03□□□□□ -0.16
TTC12-213ENST00000496311 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
TTC12-213ENST00000496311 SHROOM2Q13796 1616 aa13.97□□□□□ -0.17
TTC12-213ENST00000496311 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.18
TTC12-213ENST00000496311 IGF1RP08069 1367 aa13.96□□□□□ -0.18
TTC12-213ENST00000496311 PRG4Q92954 1404 aaPredicted RBP13.94□□□□□ -0.18
TTC12-213ENST00000496311 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms