RNA–Protein interactions for RNA: ENST00000496253.1

MFSD9-208, Transcript of major facilitator superfamily domain containing 9, humanhuman

TSL 2

Gene MFSD9, Length 347 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD9-208ENST00000496253 NISCHQ9Y2I1 1504 aa10.34□□□□□ -0.75
MFSD9-208ENST00000496253 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
MFSD9-208ENST00000496253 ABCC9O60706 1549 aa9.27□□□□□ -0.93
MFSD9-208ENST00000496253 RB1CC1Q8TDY2 1594 aa8.82□□□□□ -1
MFSD9-208ENST00000496253 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
MFSD9-208ENST00000496253 NACADO15069 1562 aa8.73□□□□□ -1.01
MFSD9-208ENST00000496253 UNC13AQ9UPW8 1703 aa8.68□□□□□ -1.02
MFSD9-208ENST00000496253 PABPN1Q86U42 306 aaKnown RBP eCLIP8.62□□□□□ -1.03
MFSD9-208ENST00000496253 ZCCHC6Q5VYS8 1495 aaKnown RBP8.61□□□□□ -1.03
MFSD9-208ENST00000496253 MYO15BQ96JP2 1530 aa8.57□□□□□ -1.04
MFSD9-208ENST00000496253 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
MFSD9-208ENST00000496253 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
MFSD9-208ENST00000496253 BICRAQ9NZM4 1560 aa8.53□□□□□ -1.04
MFSD9-208ENST00000496253 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
MFSD9-208ENST00000496253 SHROOM4Q9ULL8 1493 aa8.39□□□□□ -1.07
MFSD9-208ENST00000496253 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
MFSD9-208ENST00000496253 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
MFSD9-208ENST00000496253 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
MFSD9-208ENST00000496253 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
MFSD9-208ENST00000496253 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
MFSD9-208ENST00000496253 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
MFSD9-208ENST00000496253 ATAD2BQ9ULI0 1458 aa8.05□□□□□ -1.12
MFSD9-208ENST00000496253 HMGXB3Q12766 1538 aa8.03□□□□□ -1.12
MFSD9-208ENST00000496253 ERCC6Q03468 1493 aa8.03□□□□□ -1.12
MFSD9-208ENST00000496253 BAZ1BQ9UIG0 1483 aaKnown RBP8.03□□□□□ -1.12
MFSD9-208ENST00000496253 NCAPD3P42695 1498 aa8.02□□□□□ -1.13
MFSD9-208ENST00000496253 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
MFSD9-208ENST00000496253 NESP48681 1621 aa7.97□□□□□ -1.13
MFSD9-208ENST00000496253 PEG3Q9GZU2 1588 aa7.97□□□□□ -1.13
MFSD9-208ENST00000496253 WIZO95785 1651 aa7.95□□□□□ -1.14
MFSD9-208ENST00000496253 KIF21AQ7Z4S6 1674 aa7.92□□□□□ -1.14
MFSD9-208ENST00000496253 CUX2O14529 1486 aa7.91□□□□□ -1.14
MFSD9-208ENST00000496253 LAMC3Q9Y6N6 1575 aa7.9□□□□□ -1.14
MFSD9-208ENST00000496253 THOC2Q8NI27 1593 aaKnown RBP7.89□□□□□ -1.15
MFSD9-208ENST00000496253 PDS5BQ9NTI5 1447 aa7.83□□□□□ -1.16
MFSD9-208ENST00000496253 TOP2AP11388 1531 aaKnown RBP7.83□□□□□ -1.16
MFSD9-208ENST00000496253 RSF1Q96T23 1441 aaPredicted RBP7.82□□□□□ -1.16
MFSD9-208ENST00000496253 CADPSQ9ULU8 1353 aa7.8□□□□□ -1.16
MFSD9-208ENST00000496253 MRC2Q9UBG0 1479 aa7.8□□□□□ -1.16
MFSD9-208ENST00000496253 CEP164Q9UPV0 1460 aa7.79□□□□□ -1.16
MFSD9-208ENST00000496253 DNAJC5Q9H3Z4 198 aa7.78□□□□□ -1.16
MFSD9-208ENST00000496253 PRDM2Q13029 1718 aa7.78□□□□□ -1.16
MFSD9-208ENST00000496253 FANCD2Q9BXW9 1451 aa7.77□□□□□ -1.17
MFSD9-208ENST00000496253 WDR62O43379 1518 aa7.77□□□□□ -1.17
MFSD9-208ENST00000496253 CFTRP13569 1480 aa7.73□□□□□ -1.17
MFSD9-208ENST00000496253 CCDC88BA6NC98 1476 aa7.7□□□□□ -1.18
MFSD9-208ENST00000496253 URB2Q14146 1524 aaKnown RBP7.7□□□□□ -1.18
MFSD9-208ENST00000496253 TOPBP1Q92547 1522 aa7.62□□□□□ -1.19
MFSD9-208ENST00000496253 EIF4G3O43432 1585 aaKnown RBP7.62□□□□□ -1.19
MFSD9-208ENST00000496253 DNMBPQ6XZF7 1577 aa7.62□□□□□ -1.19
MFSD9-208ENST00000496253 SUPT5HO00267 1087 aaKnown RBP7.6□□□□□ -1.19
MFSD9-208ENST00000496253 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
MFSD9-208ENST00000496253 ZNF608Q9ULD9 1512 aaPredicted RBP7.6□□□□□ -1.19
MFSD9-208ENST00000496253 IFT140Q96RY7 1462 aa7.6□□□□□ -1.19
MFSD9-208ENST00000496253 CHD1O14646 1710 aa7.57□□□□□ -1.2
MFSD9-208ENST00000496253 ABCC8Q09428 1581 aa7.56□□□□□ -1.2
MFSD9-208ENST00000496253 TARBP1Q13395 1621 aaKnown RBP7.55□□□□□ -1.2
MFSD9-208ENST00000496253 POLA1P09884 1462 aaPredicted RBP7.55□□□□□ -1.2
MFSD9-208ENST00000496253 FGD5Q6ZNL6 1462 aa7.54□□□□□ -1.2
MFSD9-208ENST00000496253 RAD54L2Q9Y4B4 1467 aa7.54□□□□□ -1.2
MFSD9-208ENST00000496253 OSCARQ8IYS5 282 aa7.53□□□□□ -1.2
MFSD9-208ENST00000496253 AQRO60306 1485 aaKnown RBP eCLIP7.53□□□□□ -1.2
MFSD9-208ENST00000496253 CUX1P39880 1505 aa7.52□□□□□ -1.2
MFSD9-208ENST00000496253 RIMBP3CA6NJZ7 1639 aa7.52□□□□□ -1.21
MFSD9-208ENST00000496253 RIMBP3BA6NNM3 1639 aa7.52□□□□□ -1.21
MFSD9-208ENST00000496253 RIMBP3Q9UFD9 1639 aa7.52□□□□□ -1.21
MFSD9-208ENST00000496253 FBLN2P98095 1184 aa7.51□□□□□ -1.21
MFSD9-208ENST00000496253 PBRM1Q86U86 1689 aa7.51□□□□□ -1.21
MFSD9-208ENST00000496253 SOGA1O94964 1423 aa7.5□□□□□ -1.21
MFSD9-208ENST00000496253 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
MFSD9-208ENST00000496253 TDRD9Q8NDG6 1382 aaKnown RBP7.49□□□□□ -1.21
MFSD9-208ENST00000496253 SNAPC4Q5SXM2 1469 aa7.49□□□□□ -1.21
MFSD9-208ENST00000496253 ARHGEF11O15085 1522 aa7.47□□□□□ -1.21
MFSD9-208ENST00000496253 SYNJ1O43426 1573 aa7.45□□□□□ -1.22
MFSD9-208ENST00000496253 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
MFSD9-208ENST00000496253 GRIN2BQ13224 1484 aa7.43□□□□□ -1.22
MFSD9-208ENST00000496253 BIVM-ERCC5R4GMW8 1640 aa7.43□□□□□ -1.22
MFSD9-208ENST00000496253 GAPVD1Q14C86 1478 aa7.43□□□□□ -1.22
MFSD9-208ENST00000496253 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
MFSD9-208ENST00000496253 TOP2BQ02880 1626 aa7.42□□□□□ -1.22
MFSD9-208ENST00000496253 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
MFSD9-208ENST00000496253 WRNQ14191 1432 aaPredicted RBP eCLIP7.42□□□□□ -1.22
MFSD9-208ENST00000496253 SYNJ2O15056 1496 aa7.41□□□□□ -1.22
MFSD9-208ENST00000496253 CLASP1Q7Z460 1538 aa7.41□□□□□ -1.22
MFSD9-208ENST00000496253 ABCA10Q8WWZ4 1543 aa7.41□□□□□ -1.22
MFSD9-208ENST00000496253 ARAP1Q96P48 1450 aa7.4□□□□□ -1.22
MFSD9-208ENST00000496253 ADAMTS12P58397 1594 aa7.4□□□□□ -1.22
MFSD9-208ENST00000496253 CYB5RLQ6IPT4 315 aa7.39□□□□□ -1.23
MFSD9-208ENST00000496253 GRIN2AQ12879 1464 aa7.36□□□□□ -1.23
MFSD9-208ENST00000496253 CEP170Q5SW79 1584 aa7.35□□□□□ -1.23
MFSD9-208ENST00000496253 TRHP20396 242 aaPredicted RBP7.35□□□□□ -1.23
MFSD9-208ENST00000496253 ERCC6L2Q5T890 1561 aa7.33□□□□□ -1.24
MFSD9-208ENST00000496253 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
MFSD9-208ENST00000496253 FHAD1B1AJZ9 1412 aa7.32□□□□□ -1.24
MFSD9-208ENST00000496253 RUSC2Q8N2Y8 1516 aa7.3□□□□□ -1.24
MFSD9-208ENST00000496253 CUL7Q14999 1698 aa7.28□□□□□ -1.24
MFSD9-208ENST00000496253 NUP160Q12769 1436 aa7.28□□□□□ -1.24
MFSD9-208ENST00000496253 SHROOM2Q13796 1616 aa7.28□□□□□ -1.24
MFSD9-208ENST00000496253 KIF27Q86VH2 1401 aa7.26□□□□□ -1.25
MFSD9-208ENST00000496253 PRG4Q92954 1404 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms