RNA–Protein interactions for RNA: ENST00000496216.5

STX1A-213, Transcript of syntaxin 1A, humanhuman

TSL 5

Gene STX1A, Length 714 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-213ENST00000496216 NISCHQ9Y2I1 1504 aa37.98■■■■□ 3.67
STX1A-213ENST00000496216 ABCC9O60706 1549 aa34.82■■■■□ 3.16
STX1A-213ENST00000496216 CCDC180Q9P1Z9 1646 aa34.25■■■■□ 3.07
STX1A-213ENST00000496216 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
STX1A-213ENST00000496216 RB1CC1Q8TDY2 1594 aa32.95■■■□□ 2.86
STX1A-213ENST00000496216 NACADO15069 1562 aa32.62■■■□□ 2.81
STX1A-213ENST00000496216 DCAF8L2P0C7V8 631 aa32.41■■■□□ 2.78
STX1A-213ENST00000496216 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
STX1A-213ENST00000496216 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
STX1A-213ENST00000496216 UNC13AQ9UPW8 1703 aa31.93■■■□□ 2.7
STX1A-213ENST00000496216 BICRAQ9NZM4 1560 aa31.9■■■□□ 2.7
STX1A-213ENST00000496216 SHROOM4Q9ULL8 1493 aa31.61■■■□□ 2.65
STX1A-213ENST00000496216 CECR2Q9BXF3 1484 aa31.48■■■□□ 2.63
STX1A-213ENST00000496216 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
STX1A-213ENST00000496216 CC2D2AQ9P2K1 1620 aa31.39■■■□□ 2.62
STX1A-213ENST00000496216 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
STX1A-213ENST00000496216 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
STX1A-213ENST00000496216 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
STX1A-213ENST00000496216 DNAJC5Q9H3Z4 198 aa31.02■■■□□ 2.56
STX1A-213ENST00000496216 CUX2O14529 1486 aa30.33■■■□□ 2.45
STX1A-213ENST00000496216 ERCC6Q03468 1493 aa30.18■■■□□ 2.42
STX1A-213ENST00000496216 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
STX1A-213ENST00000496216 ATAD2BQ9ULI0 1458 aa29.93■■■□□ 2.38
STX1A-213ENST00000496216 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
STX1A-213ENST00000496216 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
STX1A-213ENST00000496216 NESP48681 1621 aa29.71■■■□□ 2.35
STX1A-213ENST00000496216 SMARCA4P51532 1647 aa29.67■■■□□ 2.34
STX1A-213ENST00000496216 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
STX1A-213ENST00000496216 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
STX1A-213ENST00000496216 LAMC3Q9Y6N6 1575 aa29.5■■■□□ 2.31
STX1A-213ENST00000496216 THOC2Q8NI27 1593 aaKnown RBP29.49■■■□□ 2.31
STX1A-213ENST00000496216 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.31
STX1A-213ENST00000496216 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
STX1A-213ENST00000496216 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
STX1A-213ENST00000496216 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
STX1A-213ENST00000496216 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
STX1A-213ENST00000496216 MROH2BQ7Z745 1585 aa29.2■■■□□ 2.26
STX1A-213ENST00000496216 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
STX1A-213ENST00000496216 WDR62O43379 1518 aa29.04■■■□□ 2.24
STX1A-213ENST00000496216 OSCARQ8IYS5 282 aa28.97■■■□□ 2.23
STX1A-213ENST00000496216 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
STX1A-213ENST00000496216 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
STX1A-213ENST00000496216 WIZO95785 1651 aa28.76■■■□□ 2.19
STX1A-213ENST00000496216 CFTRP13569 1480 aa28.74■■■□□ 2.19
STX1A-213ENST00000496216 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
STX1A-213ENST00000496216 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
STX1A-213ENST00000496216 TOP2AP11388 1531 aaKnown RBP28.44■■■□□ 2.14
STX1A-213ENST00000496216 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
STX1A-213ENST00000496216 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
STX1A-213ENST00000496216 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
STX1A-213ENST00000496216 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
STX1A-213ENST00000496216 ARHGEF11O15085 1522 aa28.32■■■□□ 2.12
STX1A-213ENST00000496216 ZNF608Q9ULD9 1512 aaPredicted RBP28.3■■■□□ 2.12
STX1A-213ENST00000496216 CYB5RLQ6IPT4 315 aa28.26■■■□□ 2.11
STX1A-213ENST00000496216 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
STX1A-213ENST00000496216 TOPBP1Q92547 1522 aa28.19■■■□□ 2.1
STX1A-213ENST00000496216 CCDC88BA6NC98 1476 aa28.16■■■□□ 2.1
STX1A-213ENST00000496216 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
STX1A-213ENST00000496216 TRHP20396 242 aaPredicted RBP28.15■■■□□ 2.1
STX1A-213ENST00000496216 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
STX1A-213ENST00000496216 FBLN2P98095 1184 aa28.05■■■□□ 2.08
STX1A-213ENST00000496216 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
STX1A-213ENST00000496216 DNMBPQ6XZF7 1577 aa28.03■■■□□ 2.08
STX1A-213ENST00000496216 ARAP1Q96P48 1450 aa27.99■■■□□ 2.07
STX1A-213ENST00000496216 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
STX1A-213ENST00000496216 CHD1O14646 1710 aa27.89■■■□□ 2.05
STX1A-213ENST00000496216 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
STX1A-213ENST00000496216 SOGA1O94964 1423 aa27.83■■■□□ 2.05
STX1A-213ENST00000496216 TDRD9Q8NDG6 1382 aaKnown RBP27.81■■■□□ 2.04
STX1A-213ENST00000496216 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
STX1A-213ENST00000496216 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
STX1A-213ENST00000496216 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.04
STX1A-213ENST00000496216 WDR97A6NE52 1622 aa27.7■■■□□ 2.03
STX1A-213ENST00000496216 SNAPC4Q5SXM2 1469 aa27.7■■■□□ 2.02
STX1A-213ENST00000496216 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
STX1A-213ENST00000496216 MAGI1Q96QZ7 1491 aaPredicted RBP27.67■■■□□ 2.02
STX1A-213ENST00000496216 SYNJ1O43426 1573 aa27.67■■■□□ 2.02
STX1A-213ENST00000496216 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
STX1A-213ENST00000496216 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
STX1A-213ENST00000496216 SYNJ2O15056 1496 aa27.59■■■□□ 2.01
STX1A-213ENST00000496216 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
STX1A-213ENST00000496216 CUX1P39880 1505 aa27.46■■□□□ 1.99
STX1A-213ENST00000496216 ABCA10Q8WWZ4 1543 aa27.31■■□□□ 1.96
STX1A-213ENST00000496216 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
STX1A-213ENST00000496216 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
STX1A-213ENST00000496216 ABCA5Q8WWZ7 1642 aa27.21■■□□□ 1.95
STX1A-213ENST00000496216 NUP160Q12769 1436 aa27.17■■□□□ 1.94
STX1A-213ENST00000496216 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
STX1A-213ENST00000496216 ERCC6L2Q5T890 1561 aa27.14■■□□□ 1.93
STX1A-213ENST00000496216 CEP170Q5SW79 1584 aa27.13■■□□□ 1.93
STX1A-213ENST00000496216 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
STX1A-213ENST00000496216 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
STX1A-213ENST00000496216 SHROOM2Q13796 1616 aa27.03■■□□□ 1.92
STX1A-213ENST00000496216 JPH4Q96JJ6 628 aa27■■□□□ 1.91
STX1A-213ENST00000496216 NPM1P06748 294 aaKnown RBP eCLIP26.99■■□□□ 1.91
STX1A-213ENST00000496216 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
STX1A-213ENST00000496216 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
STX1A-213ENST00000496216 FAM69CQ0P6D2 419 aa26.94■■□□□ 1.9
STX1A-213ENST00000496216 TOP2BQ02880 1626 aa26.89■■□□□ 1.9
STX1A-213ENST00000496216 ABCC10Q5T3U5 1492 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms