RNA–Protein interactions for RNA: ENST00000496198.1

NTM-219, Transcript of neurotrimin, humanhuman

TSL 2

Gene NTM, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTM-219ENST00000496198 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
NTM-219ENST00000496198 CCDC180Q9P1Z9 1646 aa34.07■■■■□ 3.04
NTM-219ENST00000496198 ABCC9O60706 1549 aa33.69■■■□□ 2.98
NTM-219ENST00000496198 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
NTM-219ENST00000496198 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
NTM-219ENST00000496198 NACADO15069 1562 aa32.11■■■□□ 2.73
NTM-219ENST00000496198 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
NTM-219ENST00000496198 MYO15BQ96JP2 1530 aa31.8■■■□□ 2.68
NTM-219ENST00000496198 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
NTM-219ENST00000496198 PABPN1Q86U42 306 aaKnown RBP eCLIP31.48■■■□□ 2.63
NTM-219ENST00000496198 UNC13AQ9UPW8 1703 aa31.45■■■□□ 2.63
NTM-219ENST00000496198 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.59
NTM-219ENST00000496198 SCRIBQ14160 1630 aa31.19■■■□□ 2.58
NTM-219ENST00000496198 DNAJC5BQ9UF47 199 aa31.12■■■□□ 2.57
NTM-219ENST00000496198 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
NTM-219ENST00000496198 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
NTM-219ENST00000496198 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
NTM-219ENST00000496198 CECR2Q9BXF3 1484 aa30.27■■■□□ 2.44
NTM-219ENST00000496198 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
NTM-219ENST00000496198 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
NTM-219ENST00000496198 ATAD2BQ9ULI0 1458 aa29.67■■■□□ 2.34
NTM-219ENST00000496198 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
NTM-219ENST00000496198 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
NTM-219ENST00000496198 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
NTM-219ENST00000496198 HMGXB3Q12766 1538 aa29.47■■■□□ 2.31
NTM-219ENST00000496198 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
NTM-219ENST00000496198 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
NTM-219ENST00000496198 WIZO95785 1651 aa29.19■■■□□ 2.26
NTM-219ENST00000496198 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
NTM-219ENST00000496198 NESP48681 1621 aa29.08■■■□□ 2.25
NTM-219ENST00000496198 ERCC6Q03468 1493 aa29.06■■■□□ 2.24
NTM-219ENST00000496198 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.22
NTM-219ENST00000496198 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
NTM-219ENST00000496198 CADPSQ9ULU8 1353 aa28.81■■■□□ 2.2
NTM-219ENST00000496198 CUX2O14529 1486 aa28.77■■■□□ 2.2
NTM-219ENST00000496198 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
NTM-219ENST00000496198 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
NTM-219ENST00000496198 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
NTM-219ENST00000496198 CFTRP13569 1480 aa28.57■■■□□ 2.16
NTM-219ENST00000496198 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
NTM-219ENST00000496198 FANCD2Q9BXW9 1451 aa28.49■■■□□ 2.15
NTM-219ENST00000496198 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
NTM-219ENST00000496198 CEP164Q9UPV0 1460 aa28.47■■■□□ 2.15
NTM-219ENST00000496198 WDR62O43379 1518 aa28.37■■■□□ 2.13
NTM-219ENST00000496198 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
NTM-219ENST00000496198 PRDM2Q13029 1718 aa28.26■■■□□ 2.12
NTM-219ENST00000496198 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
NTM-219ENST00000496198 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
NTM-219ENST00000496198 TOPBP1Q92547 1522 aa28■■■□□ 2.07
NTM-219ENST00000496198 ABCC8Q09428 1581 aa27.94■■■□□ 2.06
NTM-219ENST00000496198 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
NTM-219ENST00000496198 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
NTM-219ENST00000496198 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
NTM-219ENST00000496198 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
NTM-219ENST00000496198 CUX1P39880 1505 aa27.71■■■□□ 2.03
NTM-219ENST00000496198 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
NTM-219ENST00000496198 RAD54L2Q9Y4B4 1467 aa27.67■■■□□ 2.02
NTM-219ENST00000496198 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
NTM-219ENST00000496198 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
NTM-219ENST00000496198 SOGA1O94964 1423 aa27.65■■■□□ 2.02
NTM-219ENST00000496198 AQRO60306 1485 aaKnown RBP eCLIP27.63■■■□□ 2.01
NTM-219ENST00000496198 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
NTM-219ENST00000496198 TDRD9Q8NDG6 1382 aaKnown RBP27.55■■■□□ 2
NTM-219ENST00000496198 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
NTM-219ENST00000496198 FBLN2P98095 1184 aa27.4■■□□□ 1.98
NTM-219ENST00000496198 WDR97A6NE52 1622 aa27.4■■□□□ 1.98
NTM-219ENST00000496198 SYNJ1O43426 1573 aa27.39■■□□□ 1.98
NTM-219ENST00000496198 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
NTM-219ENST00000496198 SNAPC4Q5SXM2 1469 aa27.37■■□□□ 1.97
NTM-219ENST00000496198 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
NTM-219ENST00000496198 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
NTM-219ENST00000496198 CHD1O14646 1710 aa27.33■■□□□ 1.97
NTM-219ENST00000496198 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
NTM-219ENST00000496198 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
NTM-219ENST00000496198 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
NTM-219ENST00000496198 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
NTM-219ENST00000496198 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
NTM-219ENST00000496198 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
NTM-219ENST00000496198 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
NTM-219ENST00000496198 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
NTM-219ENST00000496198 RIMBP3CA6NJZ7 1639 aa27.14■■□□□ 1.94
NTM-219ENST00000496198 RIMBP3BA6NNM3 1639 aa27.14■■□□□ 1.94
NTM-219ENST00000496198 RIMBP3Q9UFD9 1639 aa27.14■■□□□ 1.94
NTM-219ENST00000496198 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
NTM-219ENST00000496198 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
NTM-219ENST00000496198 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
NTM-219ENST00000496198 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
NTM-219ENST00000496198 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
NTM-219ENST00000496198 GRIN2AQ12879 1464 aa26.98■■□□□ 1.91
NTM-219ENST00000496198 CYB5RLQ6IPT4 315 aa26.94■■□□□ 1.9
NTM-219ENST00000496198 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
NTM-219ENST00000496198 ARAP1Q96P48 1450 aa26.89■■□□□ 1.9
NTM-219ENST00000496198 NUP160Q12769 1436 aa26.86■■□□□ 1.89
NTM-219ENST00000496198 CEP170Q5SW79 1584 aa26.86■■□□□ 1.89
NTM-219ENST00000496198 IGF1RP08069 1367 aa26.81■■□□□ 1.88
NTM-219ENST00000496198 CUL7Q14999 1698 aa26.71■■□□□ 1.87
NTM-219ENST00000496198 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
NTM-219ENST00000496198 CARMIL1Q5VZK9 1371 aa26.66■■□□□ 1.86
NTM-219ENST00000496198 SHROOM2Q13796 1616 aa26.65■■□□□ 1.86
NTM-219ENST00000496198 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms