RNA–Protein interactions for RNA: ENST00000496156.5

LRRC41-204, Transcript of leucine rich repeat containing 41, humanhuman

TSL 5

Gene LRRC41, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-204ENST00000496156 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
LRRC41-204ENST00000496156 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
LRRC41-204ENST00000496156 ABCC9O60706 1549 aa24.32■■□□□ 1.48
LRRC41-204ENST00000496156 DCAF8L2P0C7V8 631 aa23.31■■□□□ 1.32
LRRC41-204ENST00000496156 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
LRRC41-204ENST00000496156 NACADO15069 1562 aa23.14■■□□□ 1.29
LRRC41-204ENST00000496156 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
LRRC41-204ENST00000496156 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
LRRC41-204ENST00000496156 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
LRRC41-204ENST00000496156 PABPN1Q86U42 306 aaKnown RBP eCLIP22.73■■□□□ 1.23
LRRC41-204ENST00000496156 DCAF1Q9Y4B6 1507 aa22.69■■□□□ 1.22
LRRC41-204ENST00000496156 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
LRRC41-204ENST00000496156 BICRAQ9NZM4 1560 aa22.52■■□□□ 1.2
LRRC41-204ENST00000496156 SCRIBQ14160 1630 aa22.45■■□□□ 1.18
LRRC41-204ENST00000496156 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
LRRC41-204ENST00000496156 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
LRRC41-204ENST00000496156 CC2D2AQ9P2K1 1620 aa21.95■■□□□ 1.1
LRRC41-204ENST00000496156 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
LRRC41-204ENST00000496156 SMARCA4P51532 1647 aa21.4■■□□□ 1.02
LRRC41-204ENST00000496156 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
LRRC41-204ENST00000496156 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
LRRC41-204ENST00000496156 ATAD2BQ9ULI0 1458 aa21.33■■□□□ 1.01
LRRC41-204ENST00000496156 SMARCA2P51531 1590 aa21.3■■□□□ 1
LRRC41-204ENST00000496156 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
LRRC41-204ENST00000496156 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
LRRC41-204ENST00000496156 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
LRRC41-204ENST00000496156 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
LRRC41-204ENST00000496156 WIZO95785 1651 aa21.02■□□□□ 0.96
LRRC41-204ENST00000496156 ERCC6Q03468 1493 aa20.98■□□□□ 0.95
LRRC41-204ENST00000496156 NESP48681 1621 aa20.96■□□□□ 0.95
LRRC41-204ENST00000496156 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
LRRC41-204ENST00000496156 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
LRRC41-204ENST00000496156 CUX2O14529 1486 aa20.75■□□□□ 0.91
LRRC41-204ENST00000496156 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
LRRC41-204ENST00000496156 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
LRRC41-204ENST00000496156 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
LRRC41-204ENST00000496156 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
LRRC41-204ENST00000496156 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
LRRC41-204ENST00000496156 CFTRP13569 1480 aa20.55■□□□□ 0.88
LRRC41-204ENST00000496156 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
LRRC41-204ENST00000496156 FANCD2Q9BXW9 1451 aa20.51■□□□□ 0.87
LRRC41-204ENST00000496156 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
LRRC41-204ENST00000496156 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
LRRC41-204ENST00000496156 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
LRRC41-204ENST00000496156 WDR62O43379 1518 aa20.42■□□□□ 0.86
LRRC41-204ENST00000496156 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
LRRC41-204ENST00000496156 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
LRRC41-204ENST00000496156 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
LRRC41-204ENST00000496156 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
LRRC41-204ENST00000496156 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
LRRC41-204ENST00000496156 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
LRRC41-204ENST00000496156 IFT140Q96RY7 1462 aa20.06■□□□□ 0.8
LRRC41-204ENST00000496156 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
LRRC41-204ENST00000496156 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
LRRC41-204ENST00000496156 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
LRRC41-204ENST00000496156 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
LRRC41-204ENST00000496156 SOGA1O94964 1423 aa19.93■□□□□ 0.78
LRRC41-204ENST00000496156 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
LRRC41-204ENST00000496156 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.781e-7■■■■■ 32.5
LRRC41-204ENST00000496156 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
LRRC41-204ENST00000496156 CUX1P39880 1505 aa19.92■□□□□ 0.78
LRRC41-204ENST00000496156 FGD5Q6ZNL6 1462 aa19.9■□□□□ 0.78
LRRC41-204ENST00000496156 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
LRRC41-204ENST00000496156 FBLN2P98095 1184 aa19.82■□□□□ 0.76
LRRC41-204ENST00000496156 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
LRRC41-204ENST00000496156 CHD1O14646 1710 aa19.76■□□□□ 0.75
LRRC41-204ENST00000496156 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
LRRC41-204ENST00000496156 WDR97A6NE52 1622 aa19.72■□□□□ 0.75
LRRC41-204ENST00000496156 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
LRRC41-204ENST00000496156 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
LRRC41-204ENST00000496156 SYNJ1O43426 1573 aa19.68■□□□□ 0.74
LRRC41-204ENST00000496156 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
LRRC41-204ENST00000496156 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
LRRC41-204ENST00000496156 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
LRRC41-204ENST00000496156 GAPVD1Q14C86 1478 aa19.67■□□□□ 0.74
LRRC41-204ENST00000496156 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
LRRC41-204ENST00000496156 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
LRRC41-204ENST00000496156 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
LRRC41-204ENST00000496156 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
LRRC41-204ENST00000496156 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
LRRC41-204ENST00000496156 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
LRRC41-204ENST00000496156 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
LRRC41-204ENST00000496156 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
LRRC41-204ENST00000496156 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
LRRC41-204ENST00000496156 CYB5RLQ6IPT4 315 aa19.52■□□□□ 0.72
LRRC41-204ENST00000496156 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
LRRC41-204ENST00000496156 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
LRRC41-204ENST00000496156 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
LRRC41-204ENST00000496156 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
LRRC41-204ENST00000496156 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
LRRC41-204ENST00000496156 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
LRRC41-204ENST00000496156 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
LRRC41-204ENST00000496156 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
LRRC41-204ENST00000496156 NUP160Q12769 1436 aa19.3■□□□□ 0.68
LRRC41-204ENST00000496156 IGF1RP08069 1367 aa19.28■□□□□ 0.68
LRRC41-204ENST00000496156 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
LRRC41-204ENST00000496156 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
LRRC41-204ENST00000496156 CUL7Q14999 1698 aa19.22■□□□□ 0.67
LRRC41-204ENST00000496156 JPH4Q96JJ6 628 aa19.21■□□□□ 0.67
LRRC41-204ENST00000496156 SHROOM2Q13796 1616 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms