RNA–Protein interactions for RNA: ENST00000496080.1

KRBA1-206, Transcript of KRAB-A domain containing 1, humanhuman

TSL 3

Gene KRBA1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-206ENST00000496080 NISCHQ9Y2I1 1504 aa28.38■■■□□ 2.13
KRBA1-206ENST00000496080 ABCC9O60706 1549 aa25.5■■□□□ 1.67
KRBA1-206ENST00000496080 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
KRBA1-206ENST00000496080 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
KRBA1-206ENST00000496080 NACADO15069 1562 aa24.17■■□□□ 1.46
KRBA1-206ENST00000496080 DNAJC5BQ9UF47 199 aa24.03■■□□□ 1.44
KRBA1-206ENST00000496080 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
KRBA1-206ENST00000496080 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
KRBA1-206ENST00000496080 PABPN1Q86U42 306 aaKnown RBP eCLIP23.74■■□□□ 1.39
KRBA1-206ENST00000496080 BICRAQ9NZM4 1560 aa23.55■■□□□ 1.36
KRBA1-206ENST00000496080 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
KRBA1-206ENST00000496080 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
KRBA1-206ENST00000496080 ZCCHC6Q5VYS8 1495 aaKnown RBP23.5■■□□□ 1.35
KRBA1-206ENST00000496080 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
KRBA1-206ENST00000496080 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
KRBA1-206ENST00000496080 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
KRBA1-206ENST00000496080 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
KRBA1-206ENST00000496080 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
KRBA1-206ENST00000496080 NCAPD3P42695 1498 aa22.36■■□□□ 1.17
KRBA1-206ENST00000496080 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
KRBA1-206ENST00000496080 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
KRBA1-206ENST00000496080 CUX2O14529 1486 aa22.17■■□□□ 1.14
KRBA1-206ENST00000496080 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
KRBA1-206ENST00000496080 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
KRBA1-206ENST00000496080 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
KRBA1-206ENST00000496080 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
KRBA1-206ENST00000496080 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
KRBA1-206ENST00000496080 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
KRBA1-206ENST00000496080 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
KRBA1-206ENST00000496080 NESP48681 1621 aa21.86■■□□□ 1.09
KRBA1-206ENST00000496080 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
KRBA1-206ENST00000496080 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
KRBA1-206ENST00000496080 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
KRBA1-206ENST00000496080 THOC2Q8NI27 1593 aaKnown RBP21.68■■□□□ 1.06
KRBA1-206ENST00000496080 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
KRBA1-206ENST00000496080 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
KRBA1-206ENST00000496080 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
KRBA1-206ENST00000496080 WIZO95785 1651 aa21.44■■□□□ 1.02
KRBA1-206ENST00000496080 WDR62O43379 1518 aa21.44■■□□□ 1.02
KRBA1-206ENST00000496080 CFTRP13569 1480 aa21.39■■□□□ 1.01
KRBA1-206ENST00000496080 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
KRBA1-206ENST00000496080 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
KRBA1-206ENST00000496080 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
KRBA1-206ENST00000496080 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
KRBA1-206ENST00000496080 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
KRBA1-206ENST00000496080 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
KRBA1-206ENST00000496080 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
KRBA1-206ENST00000496080 CCDC88BA6NC98 1476 aa21.05■□□□□ 0.96
KRBA1-206ENST00000496080 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
KRBA1-206ENST00000496080 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
KRBA1-206ENST00000496080 PRDM2Q13029 1718 aa20.95■□□□□ 0.94
KRBA1-206ENST00000496080 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
KRBA1-206ENST00000496080 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
KRBA1-206ENST00000496080 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
KRBA1-206ENST00000496080 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
KRBA1-206ENST00000496080 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
KRBA1-206ENST00000496080 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
KRBA1-206ENST00000496080 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
KRBA1-206ENST00000496080 ARHGEF11O15085 1522 aa20.71■□□□□ 0.91
KRBA1-206ENST00000496080 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
KRBA1-206ENST00000496080 TARBP1Q13395 1621 aaKnown RBP20.7■□□□□ 0.9
KRBA1-206ENST00000496080 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■■□□ 15.4
KRBA1-206ENST00000496080 SOGA1O94964 1423 aa20.63■□□□□ 0.89
KRBA1-206ENST00000496080 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
KRBA1-206ENST00000496080 RAD54L2Q9Y4B4 1467 aa20.58■□□□□ 0.89
KRBA1-206ENST00000496080 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
KRBA1-206ENST00000496080 FBLN2P98095 1184 aa20.56■□□□□ 0.88
KRBA1-206ENST00000496080 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
KRBA1-206ENST00000496080 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
KRBA1-206ENST00000496080 MAGI1Q96QZ7 1491 aaPredicted RBP20.51■□□□□ 0.87
KRBA1-206ENST00000496080 CHD1O14646 1710 aa20.5■□□□□ 0.87
KRBA1-206ENST00000496080 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
KRBA1-206ENST00000496080 CUX1P39880 1505 aa20.49■□□□□ 0.87
KRBA1-206ENST00000496080 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
KRBA1-206ENST00000496080 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
KRBA1-206ENST00000496080 CHMP7Q8WUX9 453 aaPredicted RBP20.48■□□□□ 0.87
KRBA1-206ENST00000496080 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
KRBA1-206ENST00000496080 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
KRBA1-206ENST00000496080 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
KRBA1-206ENST00000496080 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
KRBA1-206ENST00000496080 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
KRBA1-206ENST00000496080 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
KRBA1-206ENST00000496080 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
KRBA1-206ENST00000496080 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
KRBA1-206ENST00000496080 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
KRBA1-206ENST00000496080 PBRM1Q86U86 1689 aa20.21■□□□□ 0.83
KRBA1-206ENST00000496080 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
KRBA1-206ENST00000496080 NUP160Q12769 1436 aa20.18■□□□□ 0.82
KRBA1-206ENST00000496080 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
KRBA1-206ENST00000496080 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
KRBA1-206ENST00000496080 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
KRBA1-206ENST00000496080 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
KRBA1-206ENST00000496080 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
KRBA1-206ENST00000496080 CEP170Q5SW79 1584 aa20.05■□□□□ 0.8
KRBA1-206ENST00000496080 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
KRBA1-206ENST00000496080 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
KRBA1-206ENST00000496080 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
KRBA1-206ENST00000496080 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
KRBA1-206ENST00000496080 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
KRBA1-206ENST00000496080 IGF1RP08069 1367 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms