RNA–Protein interactions for RNA: ENST00000496027.5

CCDC13-209, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 386 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-209ENST00000496027 NISCHQ9Y2I1 1504 aa32.45■■■□□ 2.78
CCDC13-209ENST00000496027 CCDC180Q9P1Z9 1646 aa28.96■■■□□ 2.23
CCDC13-209ENST00000496027 ABCC9O60706 1549 aa28.41■■■□□ 2.14
CCDC13-209ENST00000496027 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
CCDC13-209ENST00000496027 NACADO15069 1562 aa27.31■■□□□ 1.96
CCDC13-209ENST00000496027 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CCDC13-209ENST00000496027 MYO15BQ96JP2 1530 aa27.12■■□□□ 1.93
CCDC13-209ENST00000496027 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
CCDC13-209ENST00000496027 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
CCDC13-209ENST00000496027 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
CCDC13-209ENST00000496027 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
CCDC13-209ENST00000496027 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
CCDC13-209ENST00000496027 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
CCDC13-209ENST00000496027 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
CCDC13-209ENST00000496027 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
CCDC13-209ENST00000496027 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
CCDC13-209ENST00000496027 CC2D2AQ9P2K1 1620 aa25.72■■□□□ 1.71
CCDC13-209ENST00000496027 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
CCDC13-209ENST00000496027 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
CCDC13-209ENST00000496027 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
CCDC13-209ENST00000496027 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
CCDC13-209ENST00000496027 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
CCDC13-209ENST00000496027 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
CCDC13-209ENST00000496027 HMGXB3Q12766 1538 aa25■■□□□ 1.59
CCDC13-209ENST00000496027 PEG3Q9GZU2 1588 aa24.99■■□□□ 1.59
CCDC13-209ENST00000496027 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
CCDC13-209ENST00000496027 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
CCDC13-209ENST00000496027 WIZO95785 1651 aa24.66■■□□□ 1.54
CCDC13-209ENST00000496027 RSF1Q96T23 1441 aaPredicted RBP24.63■■□□□ 1.53
CCDC13-209ENST00000496027 ERCC6Q03468 1493 aa24.57■■□□□ 1.52
CCDC13-209ENST00000496027 LAMC3Q9Y6N6 1575 aa24.55■■□□□ 1.52
CCDC13-209ENST00000496027 NESP48681 1621 aa24.5■■□□□ 1.51
CCDC13-209ENST00000496027 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
CCDC13-209ENST00000496027 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
CCDC13-209ENST00000496027 TOP2AP11388 1531 aaKnown RBP24.42■■□□□ 1.5
CCDC13-209ENST00000496027 CUX2O14529 1486 aa24.41■■□□□ 1.5
CCDC13-209ENST00000496027 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
CCDC13-209ENST00000496027 CFTRP13569 1480 aa24.23■■□□□ 1.47
CCDC13-209ENST00000496027 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
CCDC13-209ENST00000496027 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
CCDC13-209ENST00000496027 FANCD2Q9BXW9 1451 aa24.11■■□□□ 1.45
CCDC13-209ENST00000496027 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
CCDC13-209ENST00000496027 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
CCDC13-209ENST00000496027 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
CCDC13-209ENST00000496027 WDR62O43379 1518 aa24■■□□□ 1.43
CCDC13-209ENST00000496027 DNAJC5Q9H3Z4 198 aa23.92■■□□□ 1.42
CCDC13-209ENST00000496027 SUPT5HO00267 1087 aaKnown RBP23.9■■□□□ 1.42
CCDC13-209ENST00000496027 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
CCDC13-209ENST00000496027 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
CCDC13-209ENST00000496027 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
CCDC13-209ENST00000496027 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
CCDC13-209ENST00000496027 IFT140Q96RY7 1462 aa23.63■■□□□ 1.37
CCDC13-209ENST00000496027 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
CCDC13-209ENST00000496027 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
CCDC13-209ENST00000496027 SOGA1O94964 1423 aa23.45■■□□□ 1.34
CCDC13-209ENST00000496027 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
CCDC13-209ENST00000496027 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CCDC13-209ENST00000496027 CUX1P39880 1505 aa23.4■■□□□ 1.34
CCDC13-209ENST00000496027 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
CCDC13-209ENST00000496027 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
CCDC13-209ENST00000496027 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
CCDC13-209ENST00000496027 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
CCDC13-209ENST00000496027 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
CCDC13-209ENST00000496027 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.32
CCDC13-209ENST00000496027 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
CCDC13-209ENST00000496027 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
CCDC13-209ENST00000496027 BIVM-ERCC5R4GMW8 1640 aa23.21■■□□□ 1.31
CCDC13-209ENST00000496027 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
CCDC13-209ENST00000496027 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
CCDC13-209ENST00000496027 FBLN2P98095 1184 aa23.16■■□□□ 1.3
CCDC13-209ENST00000496027 GAPVD1Q14C86 1478 aa23.15■■□□□ 1.3
CCDC13-209ENST00000496027 MAGI1Q96QZ7 1491 aaPredicted RBP23.14■■□□□ 1.29
CCDC13-209ENST00000496027 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
CCDC13-209ENST00000496027 CHD1O14646 1710 aa23.11■■□□□ 1.29
CCDC13-209ENST00000496027 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
CCDC13-209ENST00000496027 SNAPC4Q5SXM2 1469 aa23.08■■□□□ 1.29
CCDC13-209ENST00000496027 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
CCDC13-209ENST00000496027 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
CCDC13-209ENST00000496027 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
CCDC13-209ENST00000496027 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
CCDC13-209ENST00000496027 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
CCDC13-209ENST00000496027 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
CCDC13-209ENST00000496027 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
CCDC13-209ENST00000496027 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
CCDC13-209ENST00000496027 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
CCDC13-209ENST00000496027 FHAD1B1AJZ9 1412 aa22.89■■□□□ 1.25
CCDC13-209ENST00000496027 CLASP1Q7Z460 1538 aa22.86■■□□□ 1.25
CCDC13-209ENST00000496027 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
CCDC13-209ENST00000496027 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
CCDC13-209ENST00000496027 ADAMTS12P58397 1594 aa22.82■■□□□ 1.24
CCDC13-209ENST00000496027 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
CCDC13-209ENST00000496027 NUP160Q12769 1436 aa22.75■■□□□ 1.23
CCDC13-209ENST00000496027 IGF1RP08069 1367 aa22.75■■□□□ 1.23
CCDC13-209ENST00000496027 CUL7Q14999 1698 aa22.68■■□□□ 1.22
CCDC13-209ENST00000496027 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
CCDC13-209ENST00000496027 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
CCDC13-209ENST00000496027 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
CCDC13-209ENST00000496027 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
CCDC13-209ENST00000496027 SHROOM2Q13796 1616 aa22.59■■□□□ 1.21
CCDC13-209ENST00000496027 KIAA0586Q9BVV6 1533 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms