RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
APOBEC3A-204ENST00000495988 CCDC180Q9P1Z9 1646 aa37.71■■■■□ 3.63
APOBEC3A-204ENST00000495988 ABCC9O60706 1549 aa37.49■■■■□ 3.59
APOBEC3A-204ENST00000495988 RB1CC1Q8TDY2 1594 aa35.79■■■■□ 3.32
APOBEC3A-204ENST00000495988 NACADO15069 1562 aa35.59■■■■□ 3.29
APOBEC3A-204ENST00000495988 DCAF8L2P0C7V8 631 aa35.49■■■■□ 3.27
APOBEC3A-204ENST00000495988 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
APOBEC3A-204ENST00000495988 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
APOBEC3A-204ENST00000495988 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
APOBEC3A-204ENST00000495988 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
APOBEC3A-204ENST00000495988 DNAJC5BQ9UF47 199 aa34.93■■■■□ 3.18
APOBEC3A-204ENST00000495988 DCAF1Q9Y4B6 1507 aa34.8■■■■□ 3.16
APOBEC3A-204ENST00000495988 BICRAQ9NZM4 1560 aa34.71■■■■□ 3.15
APOBEC3A-204ENST00000495988 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
APOBEC3A-204ENST00000495988 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
APOBEC3A-204ENST00000495988 CC2D2AQ9P2K1 1620 aa33.87■■■■□ 3.01
APOBEC3A-204ENST00000495988 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
APOBEC3A-204ENST00000495988 CECR2Q9BXF3 1484 aa33.75■■■□□ 2.99
APOBEC3A-204ENST00000495988 NCAPD3P42695 1498 aa32.84■■■□□ 2.85
APOBEC3A-204ENST00000495988 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
APOBEC3A-204ENST00000495988 ATAD2BQ9ULI0 1458 aa32.78■■■□□ 2.84
APOBEC3A-204ENST00000495988 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
APOBEC3A-204ENST00000495988 BAZ1AQ9NRL2 1556 aaPredicted RBP32.69■■■□□ 2.82
APOBEC3A-204ENST00000495988 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
APOBEC3A-204ENST00000495988 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
APOBEC3A-204ENST00000495988 PEG3Q9GZU2 1588 aa32.48■■■□□ 2.79
APOBEC3A-204ENST00000495988 MROH2BQ7Z745 1585 aa32.46■■■□□ 2.79
APOBEC3A-204ENST00000495988 ERCC6Q03468 1493 aa32.37■■■□□ 2.77
APOBEC3A-204ENST00000495988 NESP48681 1621 aa32.26■■■□□ 2.76
APOBEC3A-204ENST00000495988 CUX2O14529 1486 aa32.21■■■□□ 2.75
APOBEC3A-204ENST00000495988 WIZO95785 1651 aa32.09■■■□□ 2.73
APOBEC3A-204ENST00000495988 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
APOBEC3A-204ENST00000495988 DNAJC5Q9H3Z4 198 aa31.91■■■□□ 2.7
APOBEC3A-204ENST00000495988 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
APOBEC3A-204ENST00000495988 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
APOBEC3A-204ENST00000495988 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
APOBEC3A-204ENST00000495988 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
APOBEC3A-204ENST00000495988 CADPSQ9ULU8 1353 aa31.86■■■□□ 2.69
APOBEC3A-204ENST00000495988 TOP2AP11388 1531 aaKnown RBP31.7■■■□□ 2.67
APOBEC3A-204ENST00000495988 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
APOBEC3A-204ENST00000495988 CFTRP13569 1480 aa31.54■■■□□ 2.64
APOBEC3A-204ENST00000495988 CEP164Q9UPV0 1460 aa31.53■■■□□ 2.64
APOBEC3A-204ENST00000495988 WDR62O43379 1518 aa31.51■■■□□ 2.63
APOBEC3A-204ENST00000495988 FANCD2Q9BXW9 1451 aa31.51■■■□□ 2.63
APOBEC3A-204ENST00000495988 CCDC88BA6NC98 1476 aa31.33■■■□□ 2.61
APOBEC3A-204ENST00000495988 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
APOBEC3A-204ENST00000495988 URB2Q14146 1524 aaKnown RBP31.23■■■□□ 2.59
APOBEC3A-204ENST00000495988 TOPBP1Q92547 1522 aa30.93■■■□□ 2.54
APOBEC3A-204ENST00000495988 ABCC8Q09428 1581 aa30.89■■■□□ 2.54
APOBEC3A-204ENST00000495988 IFT140Q96RY7 1462 aa30.89■■■□□ 2.53
APOBEC3A-204ENST00000495988 DNMBPQ6XZF7 1577 aa30.85■■■□□ 2.53
APOBEC3A-204ENST00000495988 ZNF608Q9ULD9 1512 aaPredicted RBP30.81■■■□□ 2.52
APOBEC3A-204ENST00000495988 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
APOBEC3A-204ENST00000495988 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
APOBEC3A-204ENST00000495988 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
APOBEC3A-204ENST00000495988 SUPT5HO00267 1087 aaKnown RBP30.65■■■□□ 2.5
APOBEC3A-204ENST00000495988 TARBP1Q13395 1621 aaKnown RBP30.64■■■□□ 2.5
APOBEC3A-204ENST00000495988 POLA1P09884 1462 aaPredicted RBP30.63■■■□□ 2.49
APOBEC3A-204ENST00000495988 AQRO60306 1485 aaKnown RBP eCLIP30.57■■■□□ 2.48
APOBEC3A-204ENST00000495988 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
APOBEC3A-204ENST00000495988 SOGA1O94964 1423 aa30.5■■■□□ 2.47
APOBEC3A-204ENST00000495988 FGD5Q6ZNL6 1462 aa30.49■■■□□ 2.47
APOBEC3A-204ENST00000495988 CUX1P39880 1505 aa30.47■■■□□ 2.47
APOBEC3A-204ENST00000495988 TDRD9Q8NDG6 1382 aaKnown RBP30.41■■■□□ 2.46
APOBEC3A-204ENST00000495988 CHD1O14646 1710 aa30.4■■■□□ 2.46
APOBEC3A-204ENST00000495988 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
APOBEC3A-204ENST00000495988 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
APOBEC3A-204ENST00000495988 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
APOBEC3A-204ENST00000495988 WDR97A6NE52 1622 aa30.35■■■□□ 2.45
APOBEC3A-204ENST00000495988 FBLN2P98095 1184 aa30.34■■■□□ 2.45
APOBEC3A-204ENST00000495988 ARHGEF11O15085 1522 aa30.29■■■□□ 2.44
APOBEC3A-204ENST00000495988 SNAPC4Q5SXM2 1469 aa30.26■■■□□ 2.44
APOBEC3A-204ENST00000495988 GRIN2BQ13224 1484 aa30.21■■■□□ 2.43
APOBEC3A-204ENST00000495988 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
APOBEC3A-204ENST00000495988 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.42
APOBEC3A-204ENST00000495988 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.42
APOBEC3A-204ENST00000495988 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
APOBEC3A-204ENST00000495988 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
APOBEC3A-204ENST00000495988 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
APOBEC3A-204ENST00000495988 ABCA5Q8WWZ7 1642 aa30.08■■■□□ 2.41
APOBEC3A-204ENST00000495988 WRNQ14191 1432 aaPredicted RBP eCLIP30.07■■■□□ 2.4
APOBEC3A-204ENST00000495988 TOP2BQ02880 1626 aa30.07■■■□□ 2.4
APOBEC3A-204ENST00000495988 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
APOBEC3A-204ENST00000495988 CYB5RLQ6IPT4 315 aa30.06■■■□□ 2.4
APOBEC3A-204ENST00000495988 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
APOBEC3A-204ENST00000495988 CLASP1Q7Z460 1538 aa30.03■■■□□ 2.4
APOBEC3A-204ENST00000495988 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
APOBEC3A-204ENST00000495988 ADAMTS12P58397 1594 aa29.84■■■□□ 2.37
APOBEC3A-204ENST00000495988 GRIN2AQ12879 1464 aa29.83■■■□□ 2.37
APOBEC3A-204ENST00000495988 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
APOBEC3A-204ENST00000495988 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
APOBEC3A-204ENST00000495988 CEP170Q5SW79 1584 aa29.71■■■□□ 2.35
APOBEC3A-204ENST00000495988 NUP160Q12769 1436 aa29.71■■■□□ 2.35
APOBEC3A-204ENST00000495988 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
APOBEC3A-204ENST00000495988 ERCC6L2Q5T890 1561 aa29.59■■■□□ 2.33
APOBEC3A-204ENST00000495988 SHROOM2Q13796 1616 aa29.55■■■□□ 2.32
APOBEC3A-204ENST00000495988 KIF27Q86VH2 1401 aa29.49■■■□□ 2.31
APOBEC3A-204ENST00000495988 IGF1RP08069 1367 aa29.43■■■□□ 2.3
APOBEC3A-204ENST00000495988 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
APOBEC3A-204ENST00000495988 PRG4Q92954 1404 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms