RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 NISCHQ9Y2I1 1504 aa48.55■■■■■ 5.36
SPOCK2-208ENST00000495888 CCDC180Q9P1Z9 1646 aa43.4■■■■■ 4.54
SPOCK2-208ENST00000495888 ABCC9O60706 1549 aa43.3■■■■■ 4.52
SPOCK2-208ENST00000495888 RB1CC1Q8TDY2 1594 aa41.26■■■■■ 4.2
SPOCK2-208ENST00000495888 NACADO15069 1562 aa40.99■■■■■ 4.15
SPOCK2-208ENST00000495888 ZCCHC6Q5VYS8 1495 aaKnown RBP40.66■■■■■ 4.1
SPOCK2-208ENST00000495888 DNAJC5BQ9UF47 199 aa40.65■■■■■ 4.1
SPOCK2-208ENST00000495888 DCAF8L2P0C7V8 631 aa40.52■■■■■ 4.08
SPOCK2-208ENST00000495888 MYO15BQ96JP2 1530 aa40.48■■■■■ 4.07
SPOCK2-208ENST00000495888 UNC13AQ9UPW8 1703 aa40.35■■■■■ 4.05
SPOCK2-208ENST00000495888 DCAF1Q9Y4B6 1507 aa40.28■■■■■ 4.04
SPOCK2-208ENST00000495888 PABPN1Q86U42 306 aaKnown RBP eCLIP40.24■■■■■ 4.03
SPOCK2-208ENST00000495888 BICRAQ9NZM4 1560 aa40.12■■■■■ 4.01
SPOCK2-208ENST00000495888 SHROOM4Q9ULL8 1493 aa39.61■■■■□ 3.93
SPOCK2-208ENST00000495888 SCRIBQ14160 1630 aa39.45■■■■□ 3.91
SPOCK2-208ENST00000495888 CC2D2AQ9P2K1 1620 aa39.16■■■■□ 3.86
SPOCK2-208ENST00000495888 EIF4G1Q04637 1599 aaKnown RBP39.1■■■■□ 3.85
SPOCK2-208ENST00000495888 CECR2Q9BXF3 1484 aa39.04■■■■□ 3.84
SPOCK2-208ENST00000495888 NCAPD3P42695 1498 aa37.84■■■■□ 3.65
SPOCK2-208ENST00000495888 ATAD2BQ9ULI0 1458 aa37.71■■■■□ 3.63
SPOCK2-208ENST00000495888 SMARCA4P51532 1647 aa37.69■■■■□ 3.62
SPOCK2-208ENST00000495888 SMARCA2P51531 1590 aa37.61■■■■□ 3.61
SPOCK2-208ENST00000495888 HMGXB3Q12766 1538 aa37.59■■■■□ 3.61
SPOCK2-208ENST00000495888 BAZ1AQ9NRL2 1556 aaPredicted RBP37.55■■■■□ 3.6
SPOCK2-208ENST00000495888 MROH2BQ7Z745 1585 aa37.41■■■■□ 3.58
SPOCK2-208ENST00000495888 CUX2O14529 1486 aa37.39■■■■□ 3.58
SPOCK2-208ENST00000495888 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.57
SPOCK2-208ENST00000495888 ERCC6Q03468 1493 aa37.37■■■■□ 3.57
SPOCK2-208ENST00000495888 RSF1Q96T23 1441 aaPredicted RBP37.36■■■■□ 3.57
SPOCK2-208ENST00000495888 DNAJC5Q9H3Z4 198 aa37.33■■■■□ 3.57
SPOCK2-208ENST00000495888 BAZ1BQ9UIG0 1483 aaKnown RBP37.32■■■■□ 3.56
SPOCK2-208ENST00000495888 NESP48681 1621 aa37.21■■■■□ 3.55
SPOCK2-208ENST00000495888 SUPT5HO00267 1087 aaKnown RBP37.02■■■■□ 3.52
SPOCK2-208ENST00000495888 WIZO95785 1651 aa37.01■■■■□ 3.52
SPOCK2-208ENST00000495888 LAMC3Q9Y6N6 1575 aa37■■■■□ 3.51
SPOCK2-208ENST00000495888 THOC2Q8NI27 1593 aaKnown RBP36.92■■■■□ 3.5
SPOCK2-208ENST00000495888 KIF21AQ7Z4S6 1674 aa36.77■■■■□ 3.48
SPOCK2-208ENST00000495888 TOP2AP11388 1531 aaKnown RBP36.74■■■■□ 3.47
SPOCK2-208ENST00000495888 PDS5BQ9NTI5 1447 aa36.73■■■■□ 3.47
SPOCK2-208ENST00000495888 CADPSQ9ULU8 1353 aa36.65■■■■□ 3.46
SPOCK2-208ENST00000495888 MRC2Q9UBG0 1479 aa36.44■■■■□ 3.42
SPOCK2-208ENST00000495888 WDR62O43379 1518 aa36.4■■■■□ 3.42
SPOCK2-208ENST00000495888 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
SPOCK2-208ENST00000495888 CEP164Q9UPV0 1460 aa36.29■■■■□ 3.4
SPOCK2-208ENST00000495888 CFTRP13569 1480 aa36.27■■■■□ 3.4
SPOCK2-208ENST00000495888 FANCD2Q9BXW9 1451 aa36.24■■■■□ 3.39
SPOCK2-208ENST00000495888 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
SPOCK2-208ENST00000495888 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
SPOCK2-208ENST00000495888 TRIM41Q8WV44 630 aa35.59■■■■□ 3.29
SPOCK2-208ENST00000495888 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
SPOCK2-208ENST00000495888 TOPBP1Q92547 1522 aa35.57■■■■□ 3.28
SPOCK2-208ENST00000495888 OSCARQ8IYS5 282 aa35.56■■■■□ 3.28
SPOCK2-208ENST00000495888 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
SPOCK2-208ENST00000495888 ABCC8Q09428 1581 aa35.48■■■■□ 3.27
SPOCK2-208ENST00000495888 DNMBPQ6XZF7 1577 aa35.45■■■■□ 3.27
SPOCK2-208ENST00000495888 EIF4G3O43432 1585 aaKnown RBP35.35■■■■□ 3.25
SPOCK2-208ENST00000495888 TARBP1Q13395 1621 aaKnown RBP35.29■■■■□ 3.24
SPOCK2-208ENST00000495888 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
SPOCK2-208ENST00000495888 RIMBP3CA6NJZ7 1639 aa35.21■■■■□ 3.23
SPOCK2-208ENST00000495888 RIMBP3BA6NNM3 1639 aa35.21■■■■□ 3.23
SPOCK2-208ENST00000495888 RIMBP3Q9UFD9 1639 aa35.21■■■■□ 3.23
SPOCK2-208ENST00000495888 CHIC1Q5VXU3 224 aa35.19■■■■□ 3.22
SPOCK2-208ENST00000495888 WRNQ14191 1432 aaPredicted RBP eCLIP35.17■■■■□ 3.22
SPOCK2-208ENST00000495888 AQRO60306 1485 aaKnown RBP eCLIP35.15■■■■□ 3.22
SPOCK2-208ENST00000495888 ARHGEF11O15085 1522 aa35.1■■■■□ 3.21
SPOCK2-208ENST00000495888 CHD1O14646 1710 aa35.06■■■■□ 3.2
SPOCK2-208ENST00000495888 CUX1P39880 1505 aa35.05■■■■□ 3.2
SPOCK2-208ENST00000495888 RAD54L2Q9Y4B4 1467 aa35.04■■■■□ 3.2
SPOCK2-208ENST00000495888 SYNJ1O43426 1573 aa35.02■■■■□ 3.2
SPOCK2-208ENST00000495888 TOP2BQ02880 1626 aa35■■■■□ 3.19
SPOCK2-208ENST00000495888 SOGA1O94964 1423 aa34.98■■■■□ 3.19
SPOCK2-208ENST00000495888 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
SPOCK2-208ENST00000495888 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
SPOCK2-208ENST00000495888 WDR97A6NE52 1622 aa34.95■■■■□ 3.19
SPOCK2-208ENST00000495888 TDRD9Q8NDG6 1382 aaKnown RBP34.91■■■■□ 3.18
SPOCK2-208ENST00000495888 SNAPC4Q5SXM2 1469 aa34.82■■■■□ 3.16
SPOCK2-208ENST00000495888 FBLN2P98095 1184 aa34.81■■■■□ 3.16
SPOCK2-208ENST00000495888 ARAP1Q96P48 1450 aa34.76■■■■□ 3.15
SPOCK2-208ENST00000495888 MAGI1Q96QZ7 1491 aaPredicted RBP34.75■■■■□ 3.15
SPOCK2-208ENST00000495888 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
SPOCK2-208ENST00000495888 CYB5RLQ6IPT4 315 aa34.72■■■■□ 3.15
SPOCK2-208ENST00000495888 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
SPOCK2-208ENST00000495888 SYNJ2O15056 1496 aa34.63■■■■□ 3.13
SPOCK2-208ENST00000495888 PBRM1Q86U86 1689 aa34.61■■■■□ 3.13
SPOCK2-208ENST00000495888 ABCA10Q8WWZ4 1543 aa34.6■■■■□ 3.13
SPOCK2-208ENST00000495888 CHMP7Q8WUX9 453 aaPredicted RBP34.59■■■■□ 3.13
SPOCK2-208ENST00000495888 GAPVD1Q14C86 1478 aa34.58■■■■□ 3.13
SPOCK2-208ENST00000495888 ABCA5Q8WWZ7 1642 aa34.58■■■■□ 3.13
SPOCK2-208ENST00000495888 EEA1Q15075 1411 aa34.39■■■■□ 3.1
SPOCK2-208ENST00000495888 KIF27Q86VH2 1401 aa34.38■■■■□ 3.09
SPOCK2-208ENST00000495888 RUSC2Q8N2Y8 1516 aa34.31■■■■□ 3.08
SPOCK2-208ENST00000495888 GRIN2AQ12879 1464 aa34.3■■■■□ 3.08
SPOCK2-208ENST00000495888 ADAMTS12P58397 1594 aa34.3■■■■□ 3.08
SPOCK2-208ENST00000495888 TRHP20396 242 aaPredicted RBP34.29■■■■□ 3.08
SPOCK2-208ENST00000495888 NUP160Q12769 1436 aa34.21■■■■□ 3.07
SPOCK2-208ENST00000495888 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
SPOCK2-208ENST00000495888 ERICH3Q5RHP9 1530 aa34.16■■■■□ 3.06
SPOCK2-208ENST00000495888 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
SPOCK2-208ENST00000495888 FAM9AQ8IZU1 332 aaPredicted RBP34.16■■■■□ 3.06
SPOCK2-208ENST00000495888 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms