RNA–Protein interactions for RNA: ENST00000495851.5

GPD2-211, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 4

Gene GPD2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-211ENST00000495851 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
GPD2-211ENST00000495851 CCDC180Q9P1Z9 1646 aa35.98■■■■□ 3.35
GPD2-211ENST00000495851 ABCC9O60706 1549 aa35.17■■■■□ 3.22
GPD2-211ENST00000495851 RB1CC1Q8TDY2 1594 aa33.87■■■■□ 3.01
GPD2-211ENST00000495851 NACADO15069 1562 aa33.8■■■■□ 3
GPD2-211ENST00000495851 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
GPD2-211ENST00000495851 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
GPD2-211ENST00000495851 MYO15BQ96JP2 1530 aa33.58■■■□□ 2.97
GPD2-211ENST00000495851 DCAF1Q9Y4B6 1507 aa33.39■■■□□ 2.94
GPD2-211ENST00000495851 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
GPD2-211ENST00000495851 BICRAQ9NZM4 1560 aa32.79■■■□□ 2.84
GPD2-211ENST00000495851 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
GPD2-211ENST00000495851 SCRIBQ14160 1630 aa32.76■■■□□ 2.83
GPD2-211ENST00000495851 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
GPD2-211ENST00000495851 DNAJC5BQ9UF47 199 aa32.24■■■□□ 2.75
GPD2-211ENST00000495851 EIF4G1Q04637 1599 aaKnown RBP31.97■■■□□ 2.71
GPD2-211ENST00000495851 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
GPD2-211ENST00000495851 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
GPD2-211ENST00000495851 SMARCA4P51532 1647 aa31.34■■■□□ 2.61
GPD2-211ENST00000495851 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
GPD2-211ENST00000495851 SMARCA2P51531 1590 aa31.16■■■□□ 2.58
GPD2-211ENST00000495851 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
GPD2-211ENST00000495851 NCAPD3P42695 1498 aa31.14■■■□□ 2.57
GPD2-211ENST00000495851 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
GPD2-211ENST00000495851 PEG3Q9GZU2 1588 aa31.05■■■□□ 2.56
GPD2-211ENST00000495851 HMGXB3Q12766 1538 aa31.04■■■□□ 2.56
GPD2-211ENST00000495851 BAZ1BQ9UIG0 1483 aaKnown RBP30.92■■■□□ 2.54
GPD2-211ENST00000495851 WIZO95785 1651 aa30.73■■■□□ 2.51
GPD2-211ENST00000495851 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.49
GPD2-211ENST00000495851 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
GPD2-211ENST00000495851 NESP48681 1621 aa30.4■■■□□ 2.46
GPD2-211ENST00000495851 LAMC3Q9Y6N6 1575 aa30.39■■■□□ 2.46
GPD2-211ENST00000495851 ERCC6Q03468 1493 aa30.37■■■□□ 2.45
GPD2-211ENST00000495851 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
GPD2-211ENST00000495851 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
GPD2-211ENST00000495851 KIF21AQ7Z4S6 1674 aa30.12■■■□□ 2.41
GPD2-211ENST00000495851 CUX2O14529 1486 aa30.1■■■□□ 2.41
GPD2-211ENST00000495851 THOC2Q8NI27 1593 aaKnown RBP30.04■■■□□ 2.4
GPD2-211ENST00000495851 CFTRP13569 1480 aa30.03■■■□□ 2.4
GPD2-211ENST00000495851 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
GPD2-211ENST00000495851 PRDM2Q13029 1718 aa29.93■■■□□ 2.38
GPD2-211ENST00000495851 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
GPD2-211ENST00000495851 CEP164Q9UPV0 1460 aa29.89■■■□□ 2.38
GPD2-211ENST00000495851 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
GPD2-211ENST00000495851 WDR62O43379 1518 aa29.78■■■□□ 2.36
GPD2-211ENST00000495851 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
GPD2-211ENST00000495851 URB2Q14146 1524 aaKnown RBP29.59■■■□□ 2.33
GPD2-211ENST00000495851 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
GPD2-211ENST00000495851 TOPBP1Q92547 1522 aa29.41■■■□□ 2.3
GPD2-211ENST00000495851 DNMBPQ6XZF7 1577 aa29.4■■■□□ 2.3
GPD2-211ENST00000495851 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
GPD2-211ENST00000495851 DNAJC5Q9H3Z4 198 aa29.16■■■□□ 2.26
GPD2-211ENST00000495851 POLA1P09884 1462 aaPredicted RBP29.15■■■□□ 2.26
GPD2-211ENST00000495851 CUX1P39880 1505 aa29.15■■■□□ 2.26
GPD2-211ENST00000495851 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
GPD2-211ENST00000495851 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
GPD2-211ENST00000495851 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
GPD2-211ENST00000495851 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
GPD2-211ENST00000495851 SOGA1O94964 1423 aa29■■■□□ 2.23
GPD2-211ENST00000495851 RAD54L2Q9Y4B4 1467 aa28.98■■■□□ 2.23
GPD2-211ENST00000495851 WDR97A6NE52 1622 aa28.95■■■□□ 2.23
GPD2-211ENST00000495851 BIVM-ERCC5R4GMW8 1640 aa28.93■■■□□ 2.22
GPD2-211ENST00000495851 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
GPD2-211ENST00000495851 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
GPD2-211ENST00000495851 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.22
GPD2-211ENST00000495851 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
GPD2-211ENST00000495851 TDRD9Q8NDG6 1382 aaKnown RBP28.82■■■□□ 2.2
GPD2-211ENST00000495851 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
GPD2-211ENST00000495851 OSCARQ8IYS5 282 aa28.74■■■□□ 2.19
GPD2-211ENST00000495851 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
GPD2-211ENST00000495851 PBRM1Q86U86 1689 aa28.71■■■□□ 2.19
GPD2-211ENST00000495851 CHD1O14646 1710 aa28.71■■■□□ 2.19
GPD2-211ENST00000495851 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
GPD2-211ENST00000495851 GAPVD1Q14C86 1478 aa28.69■■■□□ 2.18
GPD2-211ENST00000495851 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
GPD2-211ENST00000495851 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
GPD2-211ENST00000495851 FBLN2P98095 1184 aa28.55■■■□□ 2.16
GPD2-211ENST00000495851 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
GPD2-211ENST00000495851 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
GPD2-211ENST00000495851 ERICH3Q5RHP9 1530 aa28.47■■■□□ 2.15
GPD2-211ENST00000495851 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
GPD2-211ENST00000495851 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
GPD2-211ENST00000495851 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
GPD2-211ENST00000495851 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
GPD2-211ENST00000495851 CLASP1Q7Z460 1538 aa28.37■■■□□ 2.13
GPD2-211ENST00000495851 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
GPD2-211ENST00000495851 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
GPD2-211ENST00000495851 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
GPD2-211ENST00000495851 KIF27Q86VH2 1401 aa28.34■■■□□ 2.13
GPD2-211ENST00000495851 CUL7Q14999 1698 aa28.24■■■□□ 2.11
GPD2-211ENST00000495851 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
GPD2-211ENST00000495851 NUP160Q12769 1436 aa28.21■■■□□ 2.11
GPD2-211ENST00000495851 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
GPD2-211ENST00000495851 IGF1RP08069 1367 aa28.16■■■□□ 2.1
GPD2-211ENST00000495851 ARAP1Q96P48 1450 aa28.09■■■□□ 2.09
GPD2-211ENST00000495851 SHROOM2Q13796 1616 aa28.05■■■□□ 2.08
GPD2-211ENST00000495851 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
GPD2-211ENST00000495851 CARMIL1Q5VZK9 1371 aa28.02■■■□□ 2.08
GPD2-211ENST00000495851 CYB5RLQ6IPT4 315 aa27.99■■■□□ 2.07
GPD2-211ENST00000495851 ERCC6L2Q5T890 1561 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms