RNA–Protein interactions for RNA: ENST00000495845.1

SPRR3-204, Transcript of small proline rich protein 3, humanhuman

TSL 3

Gene SPRR3, Length 500 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRR3-204ENST00000495845 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
SPRR3-204ENST00000495845 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
SPRR3-204ENST00000495845 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
SPRR3-204ENST00000495845 SENP3Q9H4L4 574 aaPredicted RBP24.72■■□□□ 1.55
SPRR3-204ENST00000495845 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
SPRR3-204ENST00000495845 ABCC9O60706 1549 aa24.1■■□□□ 1.45
SPRR3-204ENST00000495845 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
SPRR3-204ENST00000495845 FOXD1Q16676 465 aa23.37■■□□□ 1.33
SPRR3-204ENST00000495845 POTEDQ86YR6 584 aa23.16■■□□□ 1.3
SPRR3-204ENST00000495845 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
SPRR3-204ENST00000495845 RB1CC1Q8TDY2 1594 aa22.75■■□□□ 1.23
SPRR3-204ENST00000495845 NACADO15069 1562 aa22.59■■□□□ 1.21
SPRR3-204ENST00000495845 PABPN1Q86U42 306 aaKnown RBP eCLIP22.48■■□□□ 1.19
SPRR3-204ENST00000495845 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
SPRR3-204ENST00000495845 MYO15BQ96JP2 1530 aa22.31■■□□□ 1.16
SPRR3-204ENST00000495845 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
SPRR3-204ENST00000495845 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
SPRR3-204ENST00000495845 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
SPRR3-204ENST00000495845 MSH5O43196 834 aa21.95■■□□□ 1.1
SPRR3-204ENST00000495845 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
SPRR3-204ENST00000495845 SHROOM4Q9ULL8 1493 aa21.84■■□□□ 1.09
SPRR3-204ENST00000495845 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
SPRR3-204ENST00000495845 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
SPRR3-204ENST00000495845 SCRIBQ14160 1630 aa21.66■■□□□ 1.06
SPRR3-204ENST00000495845 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
SPRR3-204ENST00000495845 PIAS4Q8N2W9 510 aaPredicted RBP21.45■■□□□ 1.02
SPRR3-204ENST00000495845 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
SPRR3-204ENST00000495845 DNAJC5Q9H3Z4 198 aa21.24■□□□□ 0.99
SPRR3-204ENST00000495845 ADRA2BP18089 450 aa21.07■□□□□ 0.96
SPRR3-204ENST00000495845 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
SPRR3-204ENST00000495845 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
SPRR3-204ENST00000495845 CUX2O14529 1486 aa20.85■□□□□ 0.93
SPRR3-204ENST00000495845 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
SPRR3-204ENST00000495845 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
SPRR3-204ENST00000495845 HMGXB3Q12766 1538 aa20.7■□□□□ 0.9
SPRR3-204ENST00000495845 NESP48681 1621 aa20.7■□□□□ 0.9
SPRR3-204ENST00000495845 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
SPRR3-204ENST00000495845 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
SPRR3-204ENST00000495845 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
SPRR3-204ENST00000495845 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
SPRR3-204ENST00000495845 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
SPRR3-204ENST00000495845 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
SPRR3-204ENST00000495845 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
SPRR3-204ENST00000495845 LAMC3Q9Y6N6 1575 aa20.4■□□□□ 0.86
SPRR3-204ENST00000495845 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
SPRR3-204ENST00000495845 CADPSQ9ULU8 1353 aa20.31■□□□□ 0.84
SPRR3-204ENST00000495845 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
SPRR3-204ENST00000495845 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
SPRR3-204ENST00000495845 WDR62O43379 1518 aa20.15■□□□□ 0.82
SPRR3-204ENST00000495845 WIZO95785 1651 aa20.11■□□□□ 0.81
SPRR3-204ENST00000495845 TRIM41Q8WV44 630 aa20.05■□□□□ 0.8
SPRR3-204ENST00000495845 CFTRP13569 1480 aa20.04■□□□□ 0.8
SPRR3-204ENST00000495845 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
SPRR3-204ENST00000495845 CEP164Q9UPV0 1460 aa20.01■□□□□ 0.79
SPRR3-204ENST00000495845 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
SPRR3-204ENST00000495845 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
SPRR3-204ENST00000495845 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
SPRR3-204ENST00000495845 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
SPRR3-204ENST00000495845 ZNF608Q9ULD9 1512 aaPredicted RBP19.73■□□□□ 0.75
SPRR3-204ENST00000495845 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
SPRR3-204ENST00000495845 MAPK8IP2Q13387 824 aaPredicted RBP19.68■□□□□ 0.74
SPRR3-204ENST00000495845 IFT140Q96RY7 1462 aa19.66■□□□□ 0.74
SPRR3-204ENST00000495845 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
SPRR3-204ENST00000495845 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.73
SPRR3-204ENST00000495845 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.73
SPRR3-204ENST00000495845 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.73
SPRR3-204ENST00000495845 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
SPRR3-204ENST00000495845 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
SPRR3-204ENST00000495845 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
SPRR3-204ENST00000495845 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
SPRR3-204ENST00000495845 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
SPRR3-204ENST00000495845 EIF4G3O43432 1585 aaKnown RBP19.47■□□□□ 0.71
SPRR3-204ENST00000495845 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
SPRR3-204ENST00000495845 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
SPRR3-204ENST00000495845 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
SPRR3-204ENST00000495845 POLA1P09884 1462 aaPredicted RBP19.43■□□□□ 0.7
SPRR3-204ENST00000495845 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
SPRR3-204ENST00000495845 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
SPRR3-204ENST00000495845 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
SPRR3-204ENST00000495845 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
SPRR3-204ENST00000495845 SOGA1O94964 1423 aa19.33■□□□□ 0.68
SPRR3-204ENST00000495845 FBLN2P98095 1184 aa19.3■□□□□ 0.68
SPRR3-204ENST00000495845 CHD1O14646 1710 aa19.28■□□□□ 0.68
SPRR3-204ENST00000495845 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
SPRR3-204ENST00000495845 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
SPRR3-204ENST00000495845 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
SPRR3-204ENST00000495845 CUX1P39880 1505 aa19.23■□□□□ 0.67
SPRR3-204ENST00000495845 TRHP20396 242 aaPredicted RBP19.19■□□□□ 0.66
SPRR3-204ENST00000495845 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
SPRR3-204ENST00000495845 CHMP7Q8WUX9 453 aaPredicted RBP19.16■□□□□ 0.66
SPRR3-204ENST00000495845 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
SPRR3-204ENST00000495845 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
SPRR3-204ENST00000495845 SYNJ2O15056 1496 aa19.13■□□□□ 0.65
SPRR3-204ENST00000495845 SYNJ1O43426 1573 aa19.06■□□□□ 0.64
SPRR3-204ENST00000495845 GAPVD1Q14C86 1478 aa19.05■□□□□ 0.64
SPRR3-204ENST00000495845 ABCA10Q8WWZ4 1543 aa19.04■□□□□ 0.64
SPRR3-204ENST00000495845 ABCA5Q8WWZ7 1642 aa18.98■□□□□ 0.63
SPRR3-204ENST00000495845 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
SPRR3-204ENST00000495845 NUP160Q12769 1436 aa18.93■□□□□ 0.62
SPRR3-204ENST00000495845 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms