RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
SORT1-208ENST00000495777 ABCC9O60706 1549 aa20.1■□□□□ 0.81
SORT1-208ENST00000495777 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.79
SORT1-208ENST00000495777 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
SORT1-208ENST00000495777 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
SORT1-208ENST00000495777 NACADO15069 1562 aa18.98■□□□□ 0.63
SORT1-208ENST00000495777 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
SORT1-208ENST00000495777 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
SORT1-208ENST00000495777 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
SORT1-208ENST00000495777 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
SORT1-208ENST00000495777 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
SORT1-208ENST00000495777 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
SORT1-208ENST00000495777 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
SORT1-208ENST00000495777 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
SORT1-208ENST00000495777 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
SORT1-208ENST00000495777 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
SORT1-208ENST00000495777 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.5
SORT1-208ENST00000495777 EIF4G1Q04637 1599 aaKnown RBP18.12■□□□□ 0.49
SORT1-208ENST00000495777 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
SORT1-208ENST00000495777 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
SORT1-208ENST00000495777 ATAD2BQ9ULI0 1458 aa17.46■□□□□ 0.39
SORT1-208ENST00000495777 CUX2O14529 1486 aa17.41■□□□□ 0.38
SORT1-208ENST00000495777 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
SORT1-208ENST00000495777 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
SORT1-208ENST00000495777 SMARCA4P51532 1647 aa17.38■□□□□ 0.37
SORT1-208ENST00000495777 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
SORT1-208ENST00000495777 BAZ1AQ9NRL2 1556 aaPredicted RBP17.3■□□□□ 0.36
SORT1-208ENST00000495777 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
SORT1-208ENST00000495777 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
SORT1-208ENST00000495777 NESP48681 1621 aa17.24■□□□□ 0.35
SORT1-208ENST00000495777 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
SORT1-208ENST00000495777 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
SORT1-208ENST00000495777 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
SORT1-208ENST00000495777 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
SORT1-208ENST00000495777 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
SORT1-208ENST00000495777 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
SORT1-208ENST00000495777 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
SORT1-208ENST00000495777 WIZO95785 1651 aa16.9■□□□□ 0.3
SORT1-208ENST00000495777 WDR62O43379 1518 aa16.87■□□□□ 0.29
SORT1-208ENST00000495777 CFTRP13569 1480 aa16.8■□□□□ 0.28
SORT1-208ENST00000495777 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
SORT1-208ENST00000495777 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
SORT1-208ENST00000495777 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
SORT1-208ENST00000495777 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
SORT1-208ENST00000495777 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
SORT1-208ENST00000495777 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
SORT1-208ENST00000495777 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
SORT1-208ENST00000495777 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
SORT1-208ENST00000495777 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
SORT1-208ENST00000495777 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
SORT1-208ENST00000495777 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
SORT1-208ENST00000495777 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
SORT1-208ENST00000495777 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
SORT1-208ENST00000495777 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
SORT1-208ENST00000495777 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
SORT1-208ENST00000495777 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
SORT1-208ENST00000495777 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
SORT1-208ENST00000495777 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
SORT1-208ENST00000495777 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
SORT1-208ENST00000495777 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
SORT1-208ENST00000495777 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
SORT1-208ENST00000495777 AQRO60306 1485 aaKnown RBP eCLIP16.28■□□□□ 0.2
SORT1-208ENST00000495777 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
SORT1-208ENST00000495777 SOGA1O94964 1423 aa16.19■□□□□ 0.18
SORT1-208ENST00000495777 CHD1O14646 1710 aa16.17■□□□□ 0.18
SORT1-208ENST00000495777 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
SORT1-208ENST00000495777 CYB5RLQ6IPT4 315 aa16.16■□□□□ 0.18
SORT1-208ENST00000495777 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
SORT1-208ENST00000495777 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
SORT1-208ENST00000495777 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
SORT1-208ENST00000495777 FBLN2P98095 1184 aa16.14■□□□□ 0.17
SORT1-208ENST00000495777 CUX1P39880 1505 aa16.13■□□□□ 0.17
SORT1-208ENST00000495777 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
SORT1-208ENST00000495777 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
SORT1-208ENST00000495777 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
SORT1-208ENST00000495777 GRIN2BQ13224 1484 aa16.08■□□□□ 0.16
SORT1-208ENST00000495777 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
SORT1-208ENST00000495777 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
SORT1-208ENST00000495777 SYNJ1O43426 1573 aa16.03■□□□□ 0.16
SORT1-208ENST00000495777 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
SORT1-208ENST00000495777 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
SORT1-208ENST00000495777 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
SORT1-208ENST00000495777 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
SORT1-208ENST00000495777 PBRM1Q86U86 1689 aa15.92■□□□□ 0.14
SORT1-208ENST00000495777 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
SORT1-208ENST00000495777 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
SORT1-208ENST00000495777 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
SORT1-208ENST00000495777 NUP160Q12769 1436 aa15.85■□□□□ 0.13
SORT1-208ENST00000495777 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
SORT1-208ENST00000495777 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
SORT1-208ENST00000495777 BIVM-ERCC5R4GMW8 1640 aa15.83■□□□□ 0.12
SORT1-208ENST00000495777 FHAD1B1AJZ9 1412 aa15.81■□□□□ 0.12
SORT1-208ENST00000495777 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
SORT1-208ENST00000495777 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
SORT1-208ENST00000495777 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
SORT1-208ENST00000495777 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
SORT1-208ENST00000495777 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
SORT1-208ENST00000495777 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
SORT1-208ENST00000495777 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
SORT1-208ENST00000495777 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms