RNA–Protein interactions for RNA: ENST00000495744.5

PLS1-210, Transcript of plastin 1, humanhuman

TSL 4

Gene PLS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-210ENST00000495744 NISCHQ9Y2I1 1504 aa34.37■■■■□ 3.09
PLS1-210ENST00000495744 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
PLS1-210ENST00000495744 ABCC9O60706 1549 aa28.94■■■□□ 2.22
PLS1-210ENST00000495744 ZCCHC6Q5VYS8 1495 aaKnown RBP28.76■■■□□ 2.19
PLS1-210ENST00000495744 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
PLS1-210ENST00000495744 MYO15BQ96JP2 1530 aa28.42■■■□□ 2.14
PLS1-210ENST00000495744 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
PLS1-210ENST00000495744 NACADO15069 1562 aa28.34■■■□□ 2.13
PLS1-210ENST00000495744 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.1
PLS1-210ENST00000495744 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
PLS1-210ENST00000495744 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
PLS1-210ENST00000495744 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
PLS1-210ENST00000495744 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
PLS1-210ENST00000495744 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
PLS1-210ENST00000495744 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
PLS1-210ENST00000495744 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
PLS1-210ENST00000495744 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
PLS1-210ENST00000495744 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
PLS1-210ENST00000495744 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
PLS1-210ENST00000495744 RSF1Q96T23 1441 aaPredicted RBP26.42■■□□□ 1.82
PLS1-210ENST00000495744 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
PLS1-210ENST00000495744 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
PLS1-210ENST00000495744 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
PLS1-210ENST00000495744 ATAD2BQ9ULI0 1458 aa26.22■■□□□ 1.79
PLS1-210ENST00000495744 WIZO95785 1651 aa26.21■■□□□ 1.79
PLS1-210ENST00000495744 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
PLS1-210ENST00000495744 NCAPD3P42695 1498 aa26.14■■□□□ 1.78
PLS1-210ENST00000495744 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
PLS1-210ENST00000495744 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
PLS1-210ENST00000495744 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
PLS1-210ENST00000495744 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
PLS1-210ENST00000495744 CCDC88BA6NC98 1476 aa25.68■■□□□ 1.7
PLS1-210ENST00000495744 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
PLS1-210ENST00000495744 CFTRP13569 1480 aa25.39■■□□□ 1.65
PLS1-210ENST00000495744 LAMC3Q9Y6N6 1575 aa25.35■■□□□ 1.65
PLS1-210ENST00000495744 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
PLS1-210ENST00000495744 NESP48681 1621 aa25.23■■□□□ 1.63
PLS1-210ENST00000495744 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
PLS1-210ENST00000495744 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
PLS1-210ENST00000495744 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
PLS1-210ENST00000495744 KIF21AQ7Z4S6 1674 aa24.97■■□□□ 1.59
PLS1-210ENST00000495744 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
PLS1-210ENST00000495744 WRNQ14191 1432 aaPredicted RBP eCLIP24.9■■□□□ 1.58
PLS1-210ENST00000495744 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
PLS1-210ENST00000495744 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
PLS1-210ENST00000495744 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.56
PLS1-210ENST00000495744 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
PLS1-210ENST00000495744 CUX1P39880 1505 aa24.79■■□□□ 1.56
PLS1-210ENST00000495744 TOP2BQ02880 1626 aa24.79■■□□□ 1.56
PLS1-210ENST00000495744 URB2Q14146 1524 aaKnown RBP24.77■■□□□ 1.56
PLS1-210ENST00000495744 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
PLS1-210ENST00000495744 TRIM41Q8WV44 630 aa24.77■■□□□ 1.56
PLS1-210ENST00000495744 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
PLS1-210ENST00000495744 TOPBP1Q92547 1522 aa24.76■■□□□ 1.55
PLS1-210ENST00000495744 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
PLS1-210ENST00000495744 WDR62O43379 1518 aa24.73■■□□□ 1.55
PLS1-210ENST00000495744 FGD5Q6ZNL6 1462 aa24.61■■□□□ 1.53
PLS1-210ENST00000495744 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
PLS1-210ENST00000495744 SOGA1O94964 1423 aa24.52■■□□□ 1.52
PLS1-210ENST00000495744 CUX2O14529 1486 aa24.48■■□□□ 1.51
PLS1-210ENST00000495744 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
PLS1-210ENST00000495744 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
PLS1-210ENST00000495744 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
PLS1-210ENST00000495744 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
PLS1-210ENST00000495744 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
PLS1-210ENST00000495744 EEA1Q15075 1411 aa24.35■■□□□ 1.49
PLS1-210ENST00000495744 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
PLS1-210ENST00000495744 ABCA5Q8WWZ7 1642 aa24.26■■□□□ 1.47
PLS1-210ENST00000495744 TDRD9Q8NDG6 1382 aaKnown RBP24.26■■□□□ 1.47
PLS1-210ENST00000495744 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
PLS1-210ENST00000495744 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
PLS1-210ENST00000495744 ZNF608Q9ULD9 1512 aaPredicted RBP24.24■■□□□ 1.47
PLS1-210ENST00000495744 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.47
PLS1-210ENST00000495744 CSRNP3Q8WYN3 585 aa24.19■■□□□ 1.46
PLS1-210ENST00000495744 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
PLS1-210ENST00000495744 ERICH3Q5RHP9 1530 aa24.17■■□□□ 1.46
PLS1-210ENST00000495744 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
PLS1-210ENST00000495744 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
PLS1-210ENST00000495744 IGF1RP08069 1367 aa24.16■■□□□ 1.46
PLS1-210ENST00000495744 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
PLS1-210ENST00000495744 CUL7Q14999 1698 aa24.08■■□□□ 1.44
PLS1-210ENST00000495744 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
PLS1-210ENST00000495744 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
PLS1-210ENST00000495744 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
PLS1-210ENST00000495744 KIF21BO75037 1637 aa24■■□□□ 1.43
PLS1-210ENST00000495744 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
PLS1-210ENST00000495744 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
PLS1-210ENST00000495744 ADAMTS12P58397 1594 aa23.97■■□□□ 1.43
PLS1-210ENST00000495744 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
PLS1-210ENST00000495744 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
PLS1-210ENST00000495744 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
PLS1-210ENST00000495744 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
PLS1-210ENST00000495744 GRIN2AQ12879 1464 aa23.83■■□□□ 1.41
PLS1-210ENST00000495744 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
PLS1-210ENST00000495744 UBTFP17480 764 aaKnown RBP23.79■■□□□ 1.4
PLS1-210ENST00000495744 FBLN2P98095 1184 aa23.78■■□□□ 1.4
PLS1-210ENST00000495744 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
PLS1-210ENST00000495744 CHD1O14646 1710 aa23.76■■□□□ 1.39
PLS1-210ENST00000495744 TNIKQ9UKE5 1360 aa23.76■■□□□ 1.39
PLS1-210ENST00000495744 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms