RNA–Protein interactions for RNA: ENST00000495741.1

MITF-216, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 4

Gene MITF, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-216ENST00000495741 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
MITF-216ENST00000495741 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
MITF-216ENST00000495741 ABCC9O60706 1549 aa26.09■■□□□ 1.77
MITF-216ENST00000495741 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
MITF-216ENST00000495741 NACADO15069 1562 aa24.7■■□□□ 1.54
MITF-216ENST00000495741 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
MITF-216ENST00000495741 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
MITF-216ENST00000495741 MYO15BQ96JP2 1530 aa24.37■■□□□ 1.49
MITF-216ENST00000495741 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
MITF-216ENST00000495741 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
MITF-216ENST00000495741 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
MITF-216ENST00000495741 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
MITF-216ENST00000495741 DCAF1Q9Y4B6 1507 aa24.02■■□□□ 1.44
MITF-216ENST00000495741 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
MITF-216ENST00000495741 SCRIBQ14160 1630 aa23.73■■□□□ 1.39
MITF-216ENST00000495741 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
MITF-216ENST00000495741 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
MITF-216ENST00000495741 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
MITF-216ENST00000495741 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
MITF-216ENST00000495741 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
MITF-216ENST00000495741 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
MITF-216ENST00000495741 SMARCA4P51532 1647 aa22.66■■□□□ 1.22
MITF-216ENST00000495741 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
MITF-216ENST00000495741 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
MITF-216ENST00000495741 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
MITF-216ENST00000495741 CUX2O14529 1486 aa22.56■■□□□ 1.2
MITF-216ENST00000495741 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
MITF-216ENST00000495741 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
MITF-216ENST00000495741 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
MITF-216ENST00000495741 NESP48681 1621 aa22.38■■□□□ 1.17
MITF-216ENST00000495741 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
MITF-216ENST00000495741 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
MITF-216ENST00000495741 THOC2Q8NI27 1593 aaKnown RBP22.2■■□□□ 1.14
MITF-216ENST00000495741 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
MITF-216ENST00000495741 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
MITF-216ENST00000495741 CADPSQ9ULU8 1353 aa22.09■■□□□ 1.13
MITF-216ENST00000495741 WIZO95785 1651 aa22.07■■□□□ 1.12
MITF-216ENST00000495741 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
MITF-216ENST00000495741 WDR62O43379 1518 aa21.9■■□□□ 1.1
MITF-216ENST00000495741 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
MITF-216ENST00000495741 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
MITF-216ENST00000495741 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
MITF-216ENST00000495741 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
MITF-216ENST00000495741 CFTRP13569 1480 aa21.82■■□□□ 1.08
MITF-216ENST00000495741 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
MITF-216ENST00000495741 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
MITF-216ENST00000495741 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
MITF-216ENST00000495741 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
MITF-216ENST00000495741 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
MITF-216ENST00000495741 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
MITF-216ENST00000495741 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
MITF-216ENST00000495741 TOPBP1Q92547 1522 aa21.4■■□□□ 1.02
MITF-216ENST00000495741 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
MITF-216ENST00000495741 DNMBPQ6XZF7 1577 aa21.34■■□□□ 1.01
MITF-216ENST00000495741 EIF4G3O43432 1585 aaKnown RBP21.27■□□□□ 0.99
MITF-216ENST00000495741 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
MITF-216ENST00000495741 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
MITF-216ENST00000495741 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
MITF-216ENST00000495741 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
MITF-216ENST00000495741 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
MITF-216ENST00000495741 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
MITF-216ENST00000495741 ARHGEF11O15085 1522 aa21.14■□□□□ 0.98
MITF-216ENST00000495741 CHD1O14646 1710 aa21.1■□□□□ 0.97
MITF-216ENST00000495741 SOGA1O94964 1423 aa21.09■□□□□ 0.97
MITF-216ENST00000495741 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
MITF-216ENST00000495741 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
MITF-216ENST00000495741 FBLN2P98095 1184 aa21.05■□□□□ 0.96
MITF-216ENST00000495741 FGD5Q6ZNL6 1462 aa21.04■□□□□ 0.96
MITF-216ENST00000495741 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
MITF-216ENST00000495741 CUX1P39880 1505 aa21■□□□□ 0.95
MITF-216ENST00000495741 CYB5RLQ6IPT4 315 aa20.98■□□□□ 0.95
MITF-216ENST00000495741 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
MITF-216ENST00000495741 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
MITF-216ENST00000495741 GRIN2BQ13224 1484 aa20.93■□□□□ 0.94
MITF-216ENST00000495741 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
MITF-216ENST00000495741 CHMP7Q8WUX9 453 aaPredicted RBP20.91■□□□□ 0.94
MITF-216ENST00000495741 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
MITF-216ENST00000495741 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
MITF-216ENST00000495741 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
MITF-216ENST00000495741 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
MITF-216ENST00000495741 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.93
MITF-216ENST00000495741 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
MITF-216ENST00000495741 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
MITF-216ENST00000495741 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
MITF-216ENST00000495741 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
MITF-216ENST00000495741 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
MITF-216ENST00000495741 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
MITF-216ENST00000495741 BIVM-ERCC5R4GMW8 1640 aa20.68■□□□□ 0.9
MITF-216ENST00000495741 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
MITF-216ENST00000495741 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
MITF-216ENST00000495741 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
MITF-216ENST00000495741 NUP160Q12769 1436 aa20.58■□□□□ 0.88
MITF-216ENST00000495741 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.88
MITF-216ENST00000495741 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
MITF-216ENST00000495741 ERCC6L2Q5T890 1561 aa20.5■□□□□ 0.87
MITF-216ENST00000495741 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
MITF-216ENST00000495741 PRG4Q92954 1404 aaPredicted RBP20.37■□□□□ 0.85
MITF-216ENST00000495741 JPH4Q96JJ6 628 aa20.37■□□□□ 0.85
MITF-216ENST00000495741 RUSC2Q8N2Y8 1516 aa20.33■□□□□ 0.85
MITF-216ENST00000495741 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms