RNA–Protein interactions for RNA: ENST00000495734.1

NME6-219, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 3

Gene NME6, Length 401 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-219ENST00000495734 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
NME6-219ENST00000495734 CCDC180Q9P1Z9 1646 aa42.54■■■■■ 4.4
NME6-219ENST00000495734 ABCC9O60706 1549 aa41.83■■■■■ 4.29
NME6-219ENST00000495734 RB1CC1Q8TDY2 1594 aa40.18■■■■■ 4.02
NME6-219ENST00000495734 DCAF8L2P0C7V8 631 aa40.12■■■■■ 4.01
NME6-219ENST00000495734 NACADO15069 1562 aa40.11■■■■■ 4.01
NME6-219ENST00000495734 MYO15BQ96JP2 1530 aa39.84■■■■□ 3.97
NME6-219ENST00000495734 ZCCHC6Q5VYS8 1495 aaKnown RBP39.82■■■■□ 3.97
NME6-219ENST00000495734 DCAF1Q9Y4B6 1507 aa39.6■■■■□ 3.93
NME6-219ENST00000495734 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
NME6-219ENST00000495734 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
NME6-219ENST00000495734 BICRAQ9NZM4 1560 aa38.91■■■■□ 3.82
NME6-219ENST00000495734 SCRIBQ14160 1630 aa38.82■■■■□ 3.81
NME6-219ENST00000495734 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.76
NME6-219ENST00000495734 DNAJC5BQ9UF47 199 aa38.54■■■■□ 3.76
NME6-219ENST00000495734 EIF4G1Q04637 1599 aaKnown RBP37.93■■■■□ 3.66
NME6-219ENST00000495734 CC2D2AQ9P2K1 1620 aa37.8■■■■□ 3.64
NME6-219ENST00000495734 CECR2Q9BXF3 1484 aa37.63■■■■□ 3.61
NME6-219ENST00000495734 SMARCA4P51532 1647 aa37.12■■■■□ 3.53
NME6-219ENST00000495734 BAZ1AQ9NRL2 1556 aaPredicted RBP37.11■■■■□ 3.53
NME6-219ENST00000495734 NCAPD3P42695 1498 aa37.03■■■■□ 3.52
NME6-219ENST00000495734 ATAD2BQ9ULI0 1458 aa37.02■■■■□ 3.52
NME6-219ENST00000495734 SMARCA2P51531 1590 aa36.95■■■■□ 3.51
NME6-219ENST00000495734 MROH2BQ7Z745 1585 aa36.86■■■■□ 3.49
NME6-219ENST00000495734 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
NME6-219ENST00000495734 PEG3Q9GZU2 1588 aa36.78■■■■□ 3.48
NME6-219ENST00000495734 BAZ1BQ9UIG0 1483 aaKnown RBP36.7■■■■□ 3.47
NME6-219ENST00000495734 RSF1Q96T23 1441 aaPredicted RBP36.42■■■■□ 3.42
NME6-219ENST00000495734 WIZO95785 1651 aa36.42■■■■□ 3.42
NME6-219ENST00000495734 NESP48681 1621 aa36.13■■■■□ 3.37
NME6-219ENST00000495734 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
NME6-219ENST00000495734 TOP2AP11388 1531 aaKnown RBP36.07■■■■□ 3.36
NME6-219ENST00000495734 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
NME6-219ENST00000495734 CADPSQ9ULU8 1353 aa35.96■■■■□ 3.35
NME6-219ENST00000495734 PDS5BQ9NTI5 1447 aa35.87■■■■□ 3.33
NME6-219ENST00000495734 CUX2O14529 1486 aa35.76■■■■□ 3.32
NME6-219ENST00000495734 CFTRP13569 1480 aa35.7■■■■□ 3.31
NME6-219ENST00000495734 CCDC88BA6NC98 1476 aa35.67■■■■□ 3.3
NME6-219ENST00000495734 KIF21AQ7Z4S6 1674 aa35.63■■■■□ 3.29
NME6-219ENST00000495734 THOC2Q8NI27 1593 aaKnown RBP35.58■■■■□ 3.29
NME6-219ENST00000495734 FANCD2Q9BXW9 1451 aa35.53■■■■□ 3.28
NME6-219ENST00000495734 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
NME6-219ENST00000495734 MRC2Q9UBG0 1479 aa35.47■■■■□ 3.27
NME6-219ENST00000495734 SUPT5HO00267 1087 aaKnown RBP35.43■■■■□ 3.26
NME6-219ENST00000495734 WDR62O43379 1518 aa35.33■■■■□ 3.25
NME6-219ENST00000495734 PRDM2Q13029 1718 aa35.27■■■■□ 3.24
NME6-219ENST00000495734 URB2Q14146 1524 aaKnown RBP35.15■■■■□ 3.22
NME6-219ENST00000495734 ABCC8Q09428 1581 aa34.96■■■■□ 3.19
NME6-219ENST00000495734 TOPBP1Q92547 1522 aa34.92■■■■□ 3.18
NME6-219ENST00000495734 DNAJC5Q9H3Z4 198 aa34.88■■■■□ 3.17
NME6-219ENST00000495734 DNMBPQ6XZF7 1577 aa34.85■■■■□ 3.17
NME6-219ENST00000495734 IFT140Q96RY7 1462 aa34.77■■■■□ 3.16
NME6-219ENST00000495734 POLA1P09884 1462 aaPredicted RBP34.62■■■■□ 3.13
NME6-219ENST00000495734 CUX1P39880 1505 aa34.59■■■■□ 3.13
NME6-219ENST00000495734 ZNF608Q9ULD9 1512 aaPredicted RBP34.59■■■■□ 3.13
NME6-219ENST00000495734 SOGA1O94964 1423 aa34.52■■■■□ 3.12
NME6-219ENST00000495734 TARBP1Q13395 1621 aaKnown RBP34.51■■■■□ 3.11
NME6-219ENST00000495734 FGD5Q6ZNL6 1462 aa34.51■■■■□ 3.11
NME6-219ENST00000495734 RAD54L2Q9Y4B4 1467 aa34.47■■■■□ 3.11
NME6-219ENST00000495734 EIF4G3O43432 1585 aaKnown RBP34.4■■■■□ 3.1
NME6-219ENST00000495734 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
NME6-219ENST00000495734 WRNQ14191 1432 aaPredicted RBP eCLIP34.36■■■■□ 3.09
NME6-219ENST00000495734 TDRD9Q8NDG6 1382 aaKnown RBP34.33■■■■□ 3.09
NME6-219ENST00000495734 OSCARQ8IYS5 282 aa34.32■■■■□ 3.08
NME6-219ENST00000495734 WDR97A6NE52 1622 aa34.26■■■■□ 3.08
NME6-219ENST00000495734 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
NME6-219ENST00000495734 SYNJ1O43426 1573 aa34.21■■■■□ 3.07
NME6-219ENST00000495734 BIVM-ERCC5R4GMW8 1640 aa34.21■■■■□ 3.07
NME6-219ENST00000495734 ABCA10Q8WWZ4 1543 aa34.19■■■■□ 3.06
NME6-219ENST00000495734 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
NME6-219ENST00000495734 GAPVD1Q14C86 1478 aa34.09■■■■□ 3.05
NME6-219ENST00000495734 FBLN2P98095 1184 aa34.07■■■■□ 3.04
NME6-219ENST00000495734 SNAPC4Q5SXM2 1469 aa34.06■■■■□ 3.04
NME6-219ENST00000495734 MAGI1Q96QZ7 1491 aaPredicted RBP34.03■■■■□ 3.04
NME6-219ENST00000495734 ABCA5Q8WWZ7 1642 aa34.01■■■■□ 3.03
NME6-219ENST00000495734 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
NME6-219ENST00000495734 CHD1O14646 1710 aa33.95■■■■□ 3.03
NME6-219ENST00000495734 PBRM1Q86U86 1689 aa33.92■■■■□ 3.02
NME6-219ENST00000495734 SYNJ2O15056 1496 aa33.9■■■■□ 3.02
NME6-219ENST00000495734 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
NME6-219ENST00000495734 FHAD1B1AJZ9 1412 aa33.71■■■□□ 2.99
NME6-219ENST00000495734 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
NME6-219ENST00000495734 KIF27Q86VH2 1401 aa33.68■■■□□ 2.98
NME6-219ENST00000495734 ARHGEF11O15085 1522 aa33.68■■■□□ 2.98
NME6-219ENST00000495734 TRIM41Q8WV44 630 aa33.66■■■□□ 2.98
NME6-219ENST00000495734 RIMBP3CA6NJZ7 1639 aa33.65■■■□□ 2.98
NME6-219ENST00000495734 RIMBP3BA6NNM3 1639 aa33.65■■■□□ 2.98
NME6-219ENST00000495734 RIMBP3Q9UFD9 1639 aa33.65■■■□□ 2.98
NME6-219ENST00000495734 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
NME6-219ENST00000495734 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
NME6-219ENST00000495734 IGF1RP08069 1367 aa33.56■■■□□ 2.96
NME6-219ENST00000495734 NUP160Q12769 1436 aa33.53■■■□□ 2.96
NME6-219ENST00000495734 CEP170Q5SW79 1584 aa33.46■■■□□ 2.95
NME6-219ENST00000495734 CYB5RLQ6IPT4 315 aa33.44■■■□□ 2.94
NME6-219ENST00000495734 CUL7Q14999 1698 aa33.39■■■□□ 2.94
NME6-219ENST00000495734 ARAP1Q96P48 1450 aa33.39■■■□□ 2.94
NME6-219ENST00000495734 CARMIL1Q5VZK9 1371 aa33.35■■■□□ 2.93
NME6-219ENST00000495734 RUSC2Q8N2Y8 1516 aa33.26■■■□□ 2.91
NME6-219ENST00000495734 JPH4Q96JJ6 628 aa33.23■■■□□ 2.91
NME6-219ENST00000495734 SHROOM2Q13796 1616 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms