RNA–Protein interactions for RNA: ENST00000495721.1

RUFY4-209, Transcript of RUN and FYVE domain containing 4, humanhuman

TSL 3

Gene RUFY4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4-209ENST00000495721 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
RUFY4-209ENST00000495721 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
RUFY4-209ENST00000495721 ABCC9O60706 1549 aa28.02■■■□□ 2.08
RUFY4-209ENST00000495721 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
RUFY4-209ENST00000495721 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
RUFY4-209ENST00000495721 NACADO15069 1562 aa26.82■■□□□ 1.88
RUFY4-209ENST00000495721 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
RUFY4-209ENST00000495721 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
RUFY4-209ENST00000495721 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
RUFY4-209ENST00000495721 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
RUFY4-209ENST00000495721 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.78
RUFY4-209ENST00000495721 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
RUFY4-209ENST00000495721 BICRAQ9NZM4 1560 aa26.12■■□□□ 1.77
RUFY4-209ENST00000495721 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
RUFY4-209ENST00000495721 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
RUFY4-209ENST00000495721 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
RUFY4-209ENST00000495721 CC2D2AQ9P2K1 1620 aa25.32■■□□□ 1.64
RUFY4-209ENST00000495721 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.61
RUFY4-209ENST00000495721 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
RUFY4-209ENST00000495721 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
RUFY4-209ENST00000495721 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
RUFY4-209ENST00000495721 ATAD2BQ9ULI0 1458 aa24.8■■□□□ 1.56
RUFY4-209ENST00000495721 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
RUFY4-209ENST00000495721 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
RUFY4-209ENST00000495721 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
RUFY4-209ENST00000495721 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
RUFY4-209ENST00000495721 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
RUFY4-209ENST00000495721 WIZO95785 1651 aa24.54■■□□□ 1.52
RUFY4-209ENST00000495721 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
RUFY4-209ENST00000495721 NESP48681 1621 aa24.26■■□□□ 1.47
RUFY4-209ENST00000495721 DNAJC5Q9H3Z4 198 aa24.26■■□□□ 1.47
RUFY4-209ENST00000495721 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
RUFY4-209ENST00000495721 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
RUFY4-209ENST00000495721 LAMC3Q9Y6N6 1575 aa24.11■■□□□ 1.45
RUFY4-209ENST00000495721 CADPSQ9ULU8 1353 aa24.05■■□□□ 1.44
RUFY4-209ENST00000495721 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
RUFY4-209ENST00000495721 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
RUFY4-209ENST00000495721 PDS5BQ9NTI5 1447 aa23.94■■□□□ 1.42
RUFY4-209ENST00000495721 SUPT5HO00267 1087 aaKnown RBP23.92■■□□□ 1.42
RUFY4-209ENST00000495721 CFTRP13569 1480 aa23.9■■□□□ 1.42
RUFY4-209ENST00000495721 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
RUFY4-209ENST00000495721 CUX2O14529 1486 aa23.82■■□□□ 1.4
RUFY4-209ENST00000495721 FANCD2Q9BXW9 1451 aa23.8■■□□□ 1.4
RUFY4-209ENST00000495721 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
RUFY4-209ENST00000495721 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
RUFY4-209ENST00000495721 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
RUFY4-209ENST00000495721 WDR62O43379 1518 aa23.64■■□□□ 1.38
RUFY4-209ENST00000495721 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
RUFY4-209ENST00000495721 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
RUFY4-209ENST00000495721 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
RUFY4-209ENST00000495721 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
RUFY4-209ENST00000495721 CUX1P39880 1505 aa23.26■■□□□ 1.31
RUFY4-209ENST00000495721 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RUFY4-209ENST00000495721 POLA1P09884 1462 aaPredicted RBP23.23■■□□□ 1.31
RUFY4-209ENST00000495721 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
RUFY4-209ENST00000495721 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
RUFY4-209ENST00000495721 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
RUFY4-209ENST00000495721 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
RUFY4-209ENST00000495721 SOGA1O94964 1423 aa23.12■■□□□ 1.29
RUFY4-209ENST00000495721 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
RUFY4-209ENST00000495721 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
RUFY4-209ENST00000495721 WRNQ14191 1432 aaPredicted RBP eCLIP23.08■■□□□ 1.29
RUFY4-209ENST00000495721 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
RUFY4-209ENST00000495721 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
RUFY4-209ENST00000495721 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
RUFY4-209ENST00000495721 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
RUFY4-209ENST00000495721 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
RUFY4-209ENST00000495721 WDR97A6NE52 1622 aa22.98■■□□□ 1.27
RUFY4-209ENST00000495721 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
RUFY4-209ENST00000495721 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
RUFY4-209ENST00000495721 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
RUFY4-209ENST00000495721 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
RUFY4-209ENST00000495721 ABCA5Q8WWZ7 1642 aa22.84■■□□□ 1.25
RUFY4-209ENST00000495721 GRIN2BQ13224 1484 aa22.84■■□□□ 1.25
RUFY4-209ENST00000495721 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
RUFY4-209ENST00000495721 CHD1O14646 1710 aa22.82■■□□□ 1.24
RUFY4-209ENST00000495721 FBLN2P98095 1184 aa22.8■■□□□ 1.24
RUFY4-209ENST00000495721 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
RUFY4-209ENST00000495721 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
RUFY4-209ENST00000495721 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
RUFY4-209ENST00000495721 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
RUFY4-209ENST00000495721 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
RUFY4-209ENST00000495721 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
RUFY4-209ENST00000495721 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
RUFY4-209ENST00000495721 GRIN2AQ12879 1464 aa22.55■■□□□ 1.2
RUFY4-209ENST00000495721 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
RUFY4-209ENST00000495721 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
RUFY4-209ENST00000495721 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
RUFY4-209ENST00000495721 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
RUFY4-209ENST00000495721 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
RUFY4-209ENST00000495721 IGF1RP08069 1367 aa22.5■■□□□ 1.19
RUFY4-209ENST00000495721 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
RUFY4-209ENST00000495721 RUSC2Q8N2Y8 1516 aa22.47■■□□□ 1.19
RUFY4-209ENST00000495721 NUP160Q12769 1436 aa22.45■■□□□ 1.18
RUFY4-209ENST00000495721 CUL7Q14999 1698 aa22.43■■□□□ 1.18
RUFY4-209ENST00000495721 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
RUFY4-209ENST00000495721 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
RUFY4-209ENST00000495721 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
RUFY4-209ENST00000495721 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
RUFY4-209ENST00000495721 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms