RNA–Protein interactions for RNA: ENST00000495659.6

TCTN1-217, Transcript of tectonic family member 1, humanhuman

TSL 2

Gene TCTN1, Length 1,988 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN1-217ENST00000495659 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
TCTN1-217ENST00000495659 CCDC180Q9P1Z9 1646 aa34.64■■■■□ 3.14
TCTN1-217ENST00000495659 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
TCTN1-217ENST00000495659 ABCC9O60706 1549 aa32.96■■■□□ 2.87
TCTN1-217ENST00000495659 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
TCTN1-217ENST00000495659 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.84
TCTN1-217ENST00000495659 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
TCTN1-217ENST00000495659 NACADO15069 1562 aa32.33■■■□□ 2.77
TCTN1-217ENST00000495659 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
TCTN1-217ENST00000495659 RB1CC1Q8TDY2 1594 aa32.08■■■□□ 2.73
TCTN1-217ENST00000495659 SCRIBQ14160 1630 aa31.86■■■□□ 2.69
TCTN1-217ENST00000495659 UNC13AQ9UPW8 1703 aa31.45■■■□□ 2.63
TCTN1-217ENST00000495659 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
TCTN1-217ENST00000495659 PABPN1Q86U42 306 aaKnown RBP eCLIP31.08■■■□□ 2.57
TCTN1-217ENST00000495659 SUPT5HO00267 1087 aaKnown RBP30.99■■■□□ 2.55
TCTN1-217ENST00000495659 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
TCTN1-217ENST00000495659 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.52
TCTN1-217ENST00000495659 MROH2BQ7Z745 1585 aa30.69■■■□□ 2.5
TCTN1-217ENST00000495659 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
TCTN1-217ENST00000495659 SMARCA4P51532 1647 aa30.54■■■□□ 2.48
TCTN1-217ENST00000495659 WIZO95785 1651 aa30.41■■■□□ 2.46
TCTN1-217ENST00000495659 EIF4G1Q04637 1599 aaKnown RBP30.22■■■□□ 2.43
TCTN1-217ENST00000495659 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
TCTN1-217ENST00000495659 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
TCTN1-217ENST00000495659 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
TCTN1-217ENST00000495659 SMARCA2P51531 1590 aa30.04■■■□□ 2.4
TCTN1-217ENST00000495659 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.38
TCTN1-217ENST00000495659 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
TCTN1-217ENST00000495659 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
TCTN1-217ENST00000495659 CCDC88BA6NC98 1476 aa29.8■■■□□ 2.36
TCTN1-217ENST00000495659 HMGXB3Q12766 1538 aa29.79■■■□□ 2.36
TCTN1-217ENST00000495659 CHIC1Q5VXU3 224 aa29.6■■■□□ 2.33
TCTN1-217ENST00000495659 DNAJC5BQ9UF47 199 aa29.3■■■□□ 2.28
TCTN1-217ENST00000495659 CFTRP13569 1480 aa29.17■■■□□ 2.26
TCTN1-217ENST00000495659 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
TCTN1-217ENST00000495659 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
TCTN1-217ENST00000495659 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
TCTN1-217ENST00000495659 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
TCTN1-217ENST00000495659 PRDM2Q13029 1718 aa28.93■■■□□ 2.22
TCTN1-217ENST00000495659 NESP48681 1621 aa28.91■■■□□ 2.22
TCTN1-217ENST00000495659 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
TCTN1-217ENST00000495659 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
TCTN1-217ENST00000495659 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
TCTN1-217ENST00000495659 TOP2BQ02880 1626 aa28.71■■■□□ 2.19
TCTN1-217ENST00000495659 CUX1P39880 1505 aa28.69■■■□□ 2.18
TCTN1-217ENST00000495659 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
TCTN1-217ENST00000495659 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
TCTN1-217ENST00000495659 FAM9AQ8IZU1 332 aaPredicted RBP28.61■■■□□ 2.17
TCTN1-217ENST00000495659 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
TCTN1-217ENST00000495659 SOGA1O94964 1423 aa28.56■■■□□ 2.16
TCTN1-217ENST00000495659 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.15
TCTN1-217ENST00000495659 LOC105371045A0A1W2PR82 267 aa28.48■■■□□ 2.15
TCTN1-217ENST00000495659 RUSC2Q8N2Y8 1516 aa28.47■■■□□ 2.15
TCTN1-217ENST00000495659 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.15
TCTN1-217ENST00000495659 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
TCTN1-217ENST00000495659 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
TCTN1-217ENST00000495659 EEA1Q15075 1411 aa28.4■■■□□ 2.14
TCTN1-217ENST00000495659 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.14
TCTN1-217ENST00000495659 CSRNP3Q8WYN3 585 aa28.31■■■□□ 2.12
TCTN1-217ENST00000495659 POLA1P09884 1462 aaPredicted RBP28.3■■■□□ 2.12
TCTN1-217ENST00000495659 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
TCTN1-217ENST00000495659 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
TCTN1-217ENST00000495659 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
TCTN1-217ENST00000495659 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
TCTN1-217ENST00000495659 KIF27Q86VH2 1401 aa28.2■■■□□ 2.1
TCTN1-217ENST00000495659 CUX2O14529 1486 aa28.18■■■□□ 2.1
TCTN1-217ENST00000495659 WDR62O43379 1518 aa28.14■■■□□ 2.1
TCTN1-217ENST00000495659 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
TCTN1-217ENST00000495659 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
TCTN1-217ENST00000495659 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
TCTN1-217ENST00000495659 KIF21BO75037 1637 aa28.04■■■□□ 2.08
TCTN1-217ENST00000495659 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
TCTN1-217ENST00000495659 IGF1RP08069 1367 aa28.03■■■□□ 2.08
TCTN1-217ENST00000495659 PRXQ9BXM0 1461 aa28.01■■■□□ 2.07
TCTN1-217ENST00000495659 GOLGA3Q08378 1498 aa28■■■□□ 2.07
TCTN1-217ENST00000495659 RAPGEF2Q9Y4G8 1499 aa27.97■■■□□ 2.07
TCTN1-217ENST00000495659 TDRD9Q8NDG6 1382 aaKnown RBP27.96■■■□□ 2.07
TCTN1-217ENST00000495659 ABCA5Q8WWZ7 1642 aa27.91■■■□□ 2.06
TCTN1-217ENST00000495659 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
TCTN1-217ENST00000495659 TNIKQ9UKE5 1360 aa27.91■■■□□ 2.06
TCTN1-217ENST00000495659 IFT140Q96RY7 1462 aa27.91■■■□□ 2.06
TCTN1-217ENST00000495659 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
TCTN1-217ENST00000495659 GAPVD1Q14C86 1478 aa27.87■■■□□ 2.05
TCTN1-217ENST00000495659 CARMIL1Q5VZK9 1371 aa27.85■■■□□ 2.05
TCTN1-217ENST00000495659 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
TCTN1-217ENST00000495659 AQRO60306 1485 aaKnown RBP eCLIP27.81■■■□□ 2.04
TCTN1-217ENST00000495659 CEP162Q5TB80 1403 aa27.75■■■□□ 2.03
TCTN1-217ENST00000495659 CUL7Q14999 1698 aa27.73■■■□□ 2.03
TCTN1-217ENST00000495659 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
TCTN1-217ENST00000495659 GRIN2BQ13224 1484 aa27.67■■■□□ 2.02
TCTN1-217ENST00000495659 EIF4G3O43432 1585 aaKnown RBP27.66■■■□□ 2.02
TCTN1-217ENST00000495659 CLIP1P30622 1438 aa27.57■■■□□ 2
TCTN1-217ENST00000495659 FHAD1B1AJZ9 1412 aa27.56■■■□□ 2
TCTN1-217ENST00000495659 ADAMTS12P58397 1594 aa27.55■■■□□ 2
TCTN1-217ENST00000495659 RANGAP1P46060 587 aaPredicted RBP27.51■■■□□ 2
TCTN1-217ENST00000495659 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
TCTN1-217ENST00000495659 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.98
TCTN1-217ENST00000495659 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
TCTN1-217ENST00000495659 ARHGAP35Q9NRY4 1499 aa27.37■■□□□ 1.97
TCTN1-217ENST00000495659 SYNJ2O15056 1496 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms