RNA–Protein interactions for RNA: ENST00000495603.2

SCAP-214, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-214ENST00000495603 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
SCAP-214ENST00000495603 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
SCAP-214ENST00000495603 ABCC9O60706 1549 aa24.45■■□□□ 1.51
SCAP-214ENST00000495603 RB1CC1Q8TDY2 1594 aa23.45■■□□□ 1.34
SCAP-214ENST00000495603 NACADO15069 1562 aa23.4■■□□□ 1.34
SCAP-214ENST00000495603 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
SCAP-214ENST00000495603 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
SCAP-214ENST00000495603 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
SCAP-214ENST00000495603 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
SCAP-214ENST00000495603 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
SCAP-214ENST00000495603 BICRAQ9NZM4 1560 aa22.83■■□□□ 1.25
SCAP-214ENST00000495603 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
SCAP-214ENST00000495603 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
SCAP-214ENST00000495603 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
SCAP-214ENST00000495603 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
SCAP-214ENST00000495603 EIF4G1Q04637 1599 aaKnown RBP22.19■■□□□ 1.14
SCAP-214ENST00000495603 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
SCAP-214ENST00000495603 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
SCAP-214ENST00000495603 SMARCA4P51532 1647 aa21.7■■□□□ 1.06
SCAP-214ENST00000495603 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
SCAP-214ENST00000495603 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
SCAP-214ENST00000495603 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
SCAP-214ENST00000495603 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
SCAP-214ENST00000495603 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
SCAP-214ENST00000495603 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
SCAP-214ENST00000495603 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
SCAP-214ENST00000495603 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
SCAP-214ENST00000495603 WIZO95785 1651 aa21.31■■□□□ 1
SCAP-214ENST00000495603 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
SCAP-214ENST00000495603 NESP48681 1621 aa21.16■□□□□ 0.98
SCAP-214ENST00000495603 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
SCAP-214ENST00000495603 ERCC6Q03468 1493 aa21.04■□□□□ 0.96
SCAP-214ENST00000495603 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
SCAP-214ENST00000495603 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
SCAP-214ENST00000495603 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
SCAP-214ENST00000495603 CUX2O14529 1486 aa20.88■□□□□ 0.93
SCAP-214ENST00000495603 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
SCAP-214ENST00000495603 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
SCAP-214ENST00000495603 CFTRP13569 1480 aa20.81■□□□□ 0.92
SCAP-214ENST00000495603 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
SCAP-214ENST00000495603 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
SCAP-214ENST00000495603 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
SCAP-214ENST00000495603 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
SCAP-214ENST00000495603 PRDM2Q13029 1718 aa20.68■□□□□ 0.9
SCAP-214ENST00000495603 WDR62O43379 1518 aa20.67■□□□□ 0.9
SCAP-214ENST00000495603 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
SCAP-214ENST00000495603 SUPT5HO00267 1087 aaKnown RBP20.52■□□□□ 0.88
SCAP-214ENST00000495603 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
SCAP-214ENST00000495603 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
SCAP-214ENST00000495603 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
SCAP-214ENST00000495603 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
SCAP-214ENST00000495603 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
SCAP-214ENST00000495603 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
SCAP-214ENST00000495603 CUX1P39880 1505 aa20.21■□□□□ 0.83
SCAP-214ENST00000495603 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
SCAP-214ENST00000495603 POLA1P09884 1462 aaPredicted RBP20.2■□□□□ 0.82
SCAP-214ENST00000495603 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
SCAP-214ENST00000495603 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
SCAP-214ENST00000495603 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
SCAP-214ENST00000495603 SOGA1O94964 1423 aa20.09■□□□□ 0.81
SCAP-214ENST00000495603 AQRO60306 1485 aaKnown RBP eCLIP20.08■□□□□ 0.811e-6■■■■■ 30.9
SCAP-214ENST00000495603 WDR97A6NE52 1622 aa20.03■□□□□ 0.8
SCAP-214ENST00000495603 SYNJ1O43426 1573 aa20■□□□□ 0.79
SCAP-214ENST00000495603 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
SCAP-214ENST00000495603 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
SCAP-214ENST00000495603 TOP2BQ02880 1626 aa19.98■□□□□ 0.79
SCAP-214ENST00000495603 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
SCAP-214ENST00000495603 OSCARQ8IYS5 282 aa19.97■□□□□ 0.79
SCAP-214ENST00000495603 CHD1O14646 1710 aa19.93■□□□□ 0.78
SCAP-214ENST00000495603 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
SCAP-214ENST00000495603 ABCA5Q8WWZ7 1642 aa19.89■□□□□ 0.77
SCAP-214ENST00000495603 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
SCAP-214ENST00000495603 SNAPC4Q5SXM2 1469 aa19.88■□□□□ 0.77
SCAP-214ENST00000495603 GRIN2BQ13224 1484 aa19.86■□□□□ 0.77
SCAP-214ENST00000495603 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
SCAP-214ENST00000495603 MAGI1Q96QZ7 1491 aaPredicted RBP19.83■□□□□ 0.76
SCAP-214ENST00000495603 FBLN2P98095 1184 aa19.79■□□□□ 0.76
SCAP-214ENST00000495603 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
SCAP-214ENST00000495603 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
SCAP-214ENST00000495603 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
SCAP-214ENST00000495603 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
SCAP-214ENST00000495603 CHMP7Q8WUX9 453 aaPredicted RBP19.72■□□□□ 0.75
SCAP-214ENST00000495603 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
SCAP-214ENST00000495603 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
SCAP-214ENST00000495603 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
SCAP-214ENST00000495603 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
SCAP-214ENST00000495603 TRIM41Q8WV44 630 aa19.65■□□□□ 0.74
SCAP-214ENST00000495603 GRIN2AQ12879 1464 aa19.63■□□□□ 0.73
SCAP-214ENST00000495603 FHAD1B1AJZ9 1412 aa19.61■□□□□ 0.73
SCAP-214ENST00000495603 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
SCAP-214ENST00000495603 NUP160Q12769 1436 aa19.56■□□□□ 0.72
SCAP-214ENST00000495603 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
SCAP-214ENST00000495603 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
SCAP-214ENST00000495603 IGF1RP08069 1367 aa19.52■□□□□ 0.72
SCAP-214ENST00000495603 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
SCAP-214ENST00000495603 CUL7Q14999 1698 aa19.48■□□□□ 0.71
SCAP-214ENST00000495603 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
SCAP-214ENST00000495603 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
SCAP-214ENST00000495603 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
SCAP-214ENST00000495603 CARMIL1Q5VZK9 1371 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms