RNA–Protein interactions for RNA: ENST00000495555.6

IFT27-211, Transcript of intraflagellar transport 27, humanhuman

TSL 2

Gene IFT27, Length 744 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-211ENST00000495555 NISCHQ9Y2I1 1504 aa29.75■■■□□ 2.35
IFT27-211ENST00000495555 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
IFT27-211ENST00000495555 ABCC9O60706 1549 aa26.34■■□□□ 1.81
IFT27-211ENST00000495555 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
IFT27-211ENST00000495555 DCAF8L2P0C7V8 631 aa25.14■■□□□ 1.62
IFT27-211ENST00000495555 DNAJC5BQ9UF47 199 aa25.14■■□□□ 1.62
IFT27-211ENST00000495555 NACADO15069 1562 aa25.1■■□□□ 1.61
IFT27-211ENST00000495555 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
IFT27-211ENST00000495555 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
IFT27-211ENST00000495555 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
IFT27-211ENST00000495555 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
IFT27-211ENST00000495555 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
IFT27-211ENST00000495555 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
IFT27-211ENST00000495555 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
IFT27-211ENST00000495555 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
IFT27-211ENST00000495555 SHROOM4Q9ULL8 1493 aa24.18■■□□□ 1.46
IFT27-211ENST00000495555 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
IFT27-211ENST00000495555 CC2D2AQ9P2K1 1620 aa23.79■■□□□ 1.4
IFT27-211ENST00000495555 CECR2Q9BXF3 1484 aa23.73■■□□□ 1.39
IFT27-211ENST00000495555 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
IFT27-211ENST00000495555 SMARCA4P51532 1647 aa23.11■■□□□ 1.29
IFT27-211ENST00000495555 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
IFT27-211ENST00000495555 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
IFT27-211ENST00000495555 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
IFT27-211ENST00000495555 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
IFT27-211ENST00000495555 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
IFT27-211ENST00000495555 MROH2BQ7Z745 1585 aa22.89■■□□□ 1.26
IFT27-211ENST00000495555 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
IFT27-211ENST00000495555 ERCC6Q03468 1493 aa22.79■■□□□ 1.24
IFT27-211ENST00000495555 NESP48681 1621 aa22.67■■□□□ 1.22
IFT27-211ENST00000495555 CUX2O14529 1486 aa22.64■■□□□ 1.21
IFT27-211ENST00000495555 WIZO95785 1651 aa22.61■■□□□ 1.21
IFT27-211ENST00000495555 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
IFT27-211ENST00000495555 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
IFT27-211ENST00000495555 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
IFT27-211ENST00000495555 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
IFT27-211ENST00000495555 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
IFT27-211ENST00000495555 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
IFT27-211ENST00000495555 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
IFT27-211ENST00000495555 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
IFT27-211ENST00000495555 CFTRP13569 1480 aa22.27■■□□□ 1.16
IFT27-211ENST00000495555 MRC2Q9UBG0 1479 aa22.26■■□□□ 1.15
IFT27-211ENST00000495555 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
IFT27-211ENST00000495555 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
IFT27-211ENST00000495555 WDR62O43379 1518 aa22.16■■□□□ 1.14
IFT27-211ENST00000495555 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
IFT27-211ENST00000495555 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
IFT27-211ENST00000495555 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
IFT27-211ENST00000495555 ABCC8Q09428 1581 aa21.87■■□□□ 1.09
IFT27-211ENST00000495555 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
IFT27-211ENST00000495555 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
IFT27-211ENST00000495555 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
IFT27-211ENST00000495555 DNMBPQ6XZF7 1577 aa21.74■■□□□ 1.07
IFT27-211ENST00000495555 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
IFT27-211ENST00000495555 ZNF608Q9ULD9 1512 aaPredicted RBP21.66■■□□□ 1.06
IFT27-211ENST00000495555 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
IFT27-211ENST00000495555 SOGA1O94964 1423 aa21.57■■□□□ 1.04
IFT27-211ENST00000495555 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
IFT27-211ENST00000495555 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
IFT27-211ENST00000495555 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
IFT27-211ENST00000495555 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
IFT27-211ENST00000495555 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
IFT27-211ENST00000495555 CUX1P39880 1505 aa21.5■■□□□ 1.03
IFT27-211ENST00000495555 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
IFT27-211ENST00000495555 FBLN2P98095 1184 aa21.45■■□□□ 1.02
IFT27-211ENST00000495555 WDR97A6NE52 1622 aa21.41■■□□□ 1.02
IFT27-211ENST00000495555 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
IFT27-211ENST00000495555 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
IFT27-211ENST00000495555 GRIN2BQ13224 1484 aa21.33■■□□□ 1.01
IFT27-211ENST00000495555 CHD1O14646 1710 aa21.32■■□□□ 1
IFT27-211ENST00000495555 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
IFT27-211ENST00000495555 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
IFT27-211ENST00000495555 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
IFT27-211ENST00000495555 GAPVD1Q14C86 1478 aa21.29■■□□□ 1
IFT27-211ENST00000495555 ABCA10Q8WWZ4 1543 aa21.28■■□□□ 1
IFT27-211ENST00000495555 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
IFT27-211ENST00000495555 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
IFT27-211ENST00000495555 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
IFT27-211ENST00000495555 ARHGEF11O15085 1522 aa21.25■□□□□ 0.99
IFT27-211ENST00000495555 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
IFT27-211ENST00000495555 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
IFT27-211ENST00000495555 BIVM-ERCC5R4GMW8 1640 aa21.2■□□□□ 0.98
IFT27-211ENST00000495555 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
IFT27-211ENST00000495555 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
IFT27-211ENST00000495555 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
IFT27-211ENST00000495555 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
IFT27-211ENST00000495555 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
IFT27-211ENST00000495555 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
IFT27-211ENST00000495555 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
IFT27-211ENST00000495555 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
IFT27-211ENST00000495555 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
IFT27-211ENST00000495555 ADAMTS12P58397 1594 aa21■□□□□ 0.95
IFT27-211ENST00000495555 ILDR1Q86SU0 546 aaPredicted RBP20.96■□□□□ 0.95
IFT27-211ENST00000495555 NUP160Q12769 1436 aa20.95■□□□□ 0.94
IFT27-211ENST00000495555 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
IFT27-211ENST00000495555 KIF27Q86VH2 1401 aa20.91■□□□□ 0.94
IFT27-211ENST00000495555 CEP170Q5SW79 1584 aa20.89■□□□□ 0.93
IFT27-211ENST00000495555 IGF1RP08069 1367 aa20.85■□□□□ 0.93
IFT27-211ENST00000495555 JPH4Q96JJ6 628 aa20.82■□□□□ 0.92
IFT27-211ENST00000495555 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms