RNA–Protein interactions for RNA: ENST00000495519.1

KDM5C-213, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-213ENST00000495519 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
KDM5C-213ENST00000495519 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
KDM5C-213ENST00000495519 ABCC9O60706 1549 aa25.1■■□□□ 1.61
KDM5C-213ENST00000495519 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.44
KDM5C-213ENST00000495519 NACADO15069 1562 aa24■■□□□ 1.43
KDM5C-213ENST00000495519 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
KDM5C-213ENST00000495519 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
KDM5C-213ENST00000495519 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
KDM5C-213ENST00000495519 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
KDM5C-213ENST00000495519 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
KDM5C-213ENST00000495519 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
KDM5C-213ENST00000495519 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
KDM5C-213ENST00000495519 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
KDM5C-213ENST00000495519 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
KDM5C-213ENST00000495519 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
KDM5C-213ENST00000495519 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
KDM5C-213ENST00000495519 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
KDM5C-213ENST00000495519 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
KDM5C-213ENST00000495519 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
KDM5C-213ENST00000495519 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
KDM5C-213ENST00000495519 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
KDM5C-213ENST00000495519 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
KDM5C-213ENST00000495519 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
KDM5C-213ENST00000495519 HMGXB3Q12766 1538 aa22.01■■□□□ 1.11
KDM5C-213ENST00000495519 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
KDM5C-213ENST00000495519 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.11
KDM5C-213ENST00000495519 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
KDM5C-213ENST00000495519 WIZO95785 1651 aa21.7■■□□□ 1.06
KDM5C-213ENST00000495519 ERCC6Q03468 1493 aa21.68■■□□□ 1.06
KDM5C-213ENST00000495519 NESP48681 1621 aa21.64■■□□□ 1.05
KDM5C-213ENST00000495519 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
KDM5C-213ENST00000495519 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
KDM5C-213ENST00000495519 CUX2O14529 1486 aa21.53■■□□□ 1.04
KDM5C-213ENST00000495519 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
KDM5C-213ENST00000495519 CADPSQ9ULU8 1353 aa21.48■■□□□ 1.03
KDM5C-213ENST00000495519 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
KDM5C-213ENST00000495519 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
KDM5C-213ENST00000495519 THOC2Q8NI27 1593 aaKnown RBP21.37■■□□□ 1.01
KDM5C-213ENST00000495519 CFTRP13569 1480 aa21.31■■□□□ 1
KDM5C-213ENST00000495519 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
KDM5C-213ENST00000495519 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
KDM5C-213ENST00000495519 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
KDM5C-213ENST00000495519 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
KDM5C-213ENST00000495519 WDR62O43379 1518 aa21.18■□□□□ 0.98
KDM5C-213ENST00000495519 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
KDM5C-213ENST00000495519 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
KDM5C-213ENST00000495519 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
KDM5C-213ENST00000495519 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
KDM5C-213ENST00000495519 ABCC8Q09428 1581 aa20.89■□□□□ 0.93
KDM5C-213ENST00000495519 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
KDM5C-213ENST00000495519 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
KDM5C-213ENST00000495519 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
KDM5C-213ENST00000495519 ZNF608Q9ULD9 1512 aaPredicted RBP20.69■□□□□ 0.9
KDM5C-213ENST00000495519 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
KDM5C-213ENST00000495519 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
KDM5C-213ENST00000495519 CUX1P39880 1505 aa20.62■□□□□ 0.89
KDM5C-213ENST00000495519 EIF4G3O43432 1585 aaKnown RBP20.61■□□□□ 0.89
KDM5C-213ENST00000495519 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
KDM5C-213ENST00000495519 SOGA1O94964 1423 aa20.6■□□□□ 0.89
KDM5C-213ENST00000495519 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
KDM5C-213ENST00000495519 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
KDM5C-213ENST00000495519 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■■ 26.9
KDM5C-213ENST00000495519 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
KDM5C-213ENST00000495519 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
KDM5C-213ENST00000495519 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
KDM5C-213ENST00000495519 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
KDM5C-213ENST00000495519 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
KDM5C-213ENST00000495519 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
KDM5C-213ENST00000495519 GRIN2BQ13224 1484 aa20.38■□□□□ 0.85
KDM5C-213ENST00000495519 FBLN2P98095 1184 aa20.38■□□□□ 0.85
KDM5C-213ENST00000495519 CHD1O14646 1710 aa20.38■□□□□ 0.85
KDM5C-213ENST00000495519 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
KDM5C-213ENST00000495519 SYNJ1O43426 1573 aa20.36■□□□□ 0.85
KDM5C-213ENST00000495519 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
KDM5C-213ENST00000495519 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
KDM5C-213ENST00000495519 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
KDM5C-213ENST00000495519 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
KDM5C-213ENST00000495519 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
KDM5C-213ENST00000495519 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
KDM5C-213ENST00000495519 SYNJ2O15056 1496 aa20.28■□□□□ 0.84
KDM5C-213ENST00000495519 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
KDM5C-213ENST00000495519 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
KDM5C-213ENST00000495519 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
KDM5C-213ENST00000495519 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
KDM5C-213ENST00000495519 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
KDM5C-213ENST00000495519 ERICH3Q5RHP9 1530 aa20.15■□□□□ 0.82
KDM5C-213ENST00000495519 ADAMTS12P58397 1594 aa20.14■□□□□ 0.81
KDM5C-213ENST00000495519 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
KDM5C-213ENST00000495519 FHAD1B1AJZ9 1412 aa20.11■□□□□ 0.81
KDM5C-213ENST00000495519 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
KDM5C-213ENST00000495519 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
KDM5C-213ENST00000495519 NUP160Q12769 1436 aa20.03■□□□□ 0.8
KDM5C-213ENST00000495519 KIF27Q86VH2 1401 aa20.03■□□□□ 0.8
KDM5C-213ENST00000495519 CEP170Q5SW79 1584 aa20■□□□□ 0.79
KDM5C-213ENST00000495519 IGF1RP08069 1367 aa19.95■□□□□ 0.79
KDM5C-213ENST00000495519 CUL7Q14999 1698 aa19.92■□□□□ 0.78
KDM5C-213ENST00000495519 SHROOM2Q13796 1616 aa19.9■□□□□ 0.78
KDM5C-213ENST00000495519 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
KDM5C-213ENST00000495519 CARMIL1Q5VZK9 1371 aa19.84■□□□□ 0.77
KDM5C-213ENST00000495519 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms