RNA–Protein interactions for RNA: ENST00000495510.1

SPART-211, Transcript of spartin, humanhuman

TSL 2

Gene SPART, Length 2,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-211ENST00000495510 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
SPART-211ENST00000495510 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
SPART-211ENST00000495510 ABCC9O60706 1549 aa30.35■■■□□ 2.45
SPART-211ENST00000495510 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
SPART-211ENST00000495510 NACADO15069 1562 aa28.79■■■□□ 2.2
SPART-211ENST00000495510 DNAJC5BQ9UF47 199 aa28.57■■■□□ 2.16
SPART-211ENST00000495510 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
SPART-211ENST00000495510 DCAF8L2P0C7V8 631 aa28.35■■■□□ 2.13
SPART-211ENST00000495510 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
SPART-211ENST00000495510 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.11
SPART-211ENST00000495510 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
SPART-211ENST00000495510 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
SPART-211ENST00000495510 ZCCHC6Q5VYS8 1495 aaKnown RBP27.96■■■□□ 2.07
SPART-211ENST00000495510 SHROOM4Q9ULL8 1493 aa27.88■■■□□ 2.05
SPART-211ENST00000495510 SCRIBQ14160 1630 aa27.54■■■□□ 2
SPART-211ENST00000495510 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
SPART-211ENST00000495510 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
SPART-211ENST00000495510 EIF4G1Q04637 1599 aaKnown RBP27.41■■□□□ 1.98
SPART-211ENST00000495510 NCAPD3P42695 1498 aa26.57■■□□□ 1.84
SPART-211ENST00000495510 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
SPART-211ENST00000495510 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
SPART-211ENST00000495510 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
SPART-211ENST00000495510 CUX2O14529 1486 aa26.36■■□□□ 1.81
SPART-211ENST00000495510 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
SPART-211ENST00000495510 SMARCA4P51532 1647 aa26.35■■□□□ 1.81
SPART-211ENST00000495510 ERCC6Q03468 1493 aa26.25■■□□□ 1.79
SPART-211ENST00000495510 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
SPART-211ENST00000495510 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
SPART-211ENST00000495510 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.77
SPART-211ENST00000495510 NESP48681 1621 aa26.02■■□□□ 1.76
SPART-211ENST00000495510 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
SPART-211ENST00000495510 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
SPART-211ENST00000495510 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
SPART-211ENST00000495510 PDS5BQ9NTI5 1447 aa25.82■■□□□ 1.72
SPART-211ENST00000495510 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
SPART-211ENST00000495510 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
SPART-211ENST00000495510 WIZO95785 1651 aa25.6■■□□□ 1.69
SPART-211ENST00000495510 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
SPART-211ENST00000495510 WDR62O43379 1518 aa25.54■■□□□ 1.68
SPART-211ENST00000495510 CEP164Q9UPV0 1460 aa25.44■■□□□ 1.66
SPART-211ENST00000495510 CFTRP13569 1480 aa25.41■■□□□ 1.66
SPART-211ENST00000495510 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
SPART-211ENST00000495510 FANCD2Q9BXW9 1451 aa25.39■■□□□ 1.65
SPART-211ENST00000495510 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
SPART-211ENST00000495510 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
SPART-211ENST00000495510 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
SPART-211ENST00000495510 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
SPART-211ENST00000495510 TRIM41Q8WV44 630 aa25.05■■□□□ 1.6
SPART-211ENST00000495510 CCDC88BA6NC98 1476 aa25.05■■□□□ 1.6
SPART-211ENST00000495510 IFT140Q96RY7 1462 aa24.98■■□□□ 1.59
SPART-211ENST00000495510 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
SPART-211ENST00000495510 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
SPART-211ENST00000495510 ZNF608Q9ULD9 1512 aaPredicted RBP24.84■■□□□ 1.57
SPART-211ENST00000495510 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
SPART-211ENST00000495510 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
SPART-211ENST00000495510 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
SPART-211ENST00000495510 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
SPART-211ENST00000495510 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
SPART-211ENST00000495510 TARBP1Q13395 1621 aaKnown RBP24.7■■□□□ 1.54
SPART-211ENST00000495510 ARHGEF11O15085 1522 aa24.64■■□□□ 1.54
SPART-211ENST00000495510 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
SPART-211ENST00000495510 AQRO60306 1485 aaKnown RBP eCLIP24.6■■□□□ 1.532e-9■■□□□ 12.5
SPART-211ENST00000495510 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
SPART-211ENST00000495510 CHD1O14646 1710 aa24.54■■□□□ 1.52
SPART-211ENST00000495510 SOGA1O94964 1423 aa24.53■■□□□ 1.52
SPART-211ENST00000495510 RAD54L2Q9Y4B4 1467 aa24.48■■□□□ 1.51
SPART-211ENST00000495510 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
SPART-211ENST00000495510 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
SPART-211ENST00000495510 CUX1P39880 1505 aa24.4■■□□□ 1.5
SPART-211ENST00000495510 FBLN2P98095 1184 aa24.4■■□□□ 1.5
SPART-211ENST00000495510 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
SPART-211ENST00000495510 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.5
SPART-211ENST00000495510 ARAP1Q96P48 1450 aa24.39■■□□□ 1.49
SPART-211ENST00000495510 SNAPC4Q5SXM2 1469 aa24.37■■□□□ 1.49
SPART-211ENST00000495510 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
SPART-211ENST00000495510 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
SPART-211ENST00000495510 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
SPART-211ENST00000495510 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
SPART-211ENST00000495510 SYNJ2O15056 1496 aa24.28■■□□□ 1.48
SPART-211ENST00000495510 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
SPART-211ENST00000495510 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
SPART-211ENST00000495510 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
SPART-211ENST00000495510 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
SPART-211ENST00000495510 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
SPART-211ENST00000495510 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
SPART-211ENST00000495510 SUPT5HO00267 1087 aaKnown RBP24.05■■□□□ 1.44
SPART-211ENST00000495510 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
SPART-211ENST00000495510 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
SPART-211ENST00000495510 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
SPART-211ENST00000495510 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
SPART-211ENST00000495510 NUP160Q12769 1436 aa23.98■■□□□ 1.43
SPART-211ENST00000495510 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.43
SPART-211ENST00000495510 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
SPART-211ENST00000495510 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
SPART-211ENST00000495510 SHROOM2Q13796 1616 aa23.89■■□□□ 1.41
SPART-211ENST00000495510 ERCC6L2Q5T890 1561 aa23.84■■□□□ 1.41
SPART-211ENST00000495510 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
SPART-211ENST00000495510 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
SPART-211ENST00000495510 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
SPART-211ENST00000495510 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms