RNA–Protein interactions for RNA: ENST00000495491.5

HCLS1-211, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 2

Gene HCLS1, Length 1,219 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-211ENST00000495491 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
HCLS1-211ENST00000495491 CCDC180Q9P1Z9 1646 aa28.84■■■□□ 2.21
HCLS1-211ENST00000495491 ABCC9O60706 1549 aa28.64■■■□□ 2.17
HCLS1-211ENST00000495491 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
HCLS1-211ENST00000495491 NACADO15069 1562 aa27.31■■□□□ 1.96
HCLS1-211ENST00000495491 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
HCLS1-211ENST00000495491 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
HCLS1-211ENST00000495491 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
HCLS1-211ENST00000495491 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
HCLS1-211ENST00000495491 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
HCLS1-211ENST00000495491 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
HCLS1-211ENST00000495491 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
HCLS1-211ENST00000495491 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
HCLS1-211ENST00000495491 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
HCLS1-211ENST00000495491 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
HCLS1-211ENST00000495491 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
HCLS1-211ENST00000495491 CC2D2AQ9P2K1 1620 aa25.91■■□□□ 1.74
HCLS1-211ENST00000495491 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
HCLS1-211ENST00000495491 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
HCLS1-211ENST00000495491 ATAD2BQ9ULI0 1458 aa25.12■■□□□ 1.61
HCLS1-211ENST00000495491 DNAJC5Q9H3Z4 198 aa25.06■■□□□ 1.6
HCLS1-211ENST00000495491 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
HCLS1-211ENST00000495491 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
HCLS1-211ENST00000495491 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
HCLS1-211ENST00000495491 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
HCLS1-211ENST00000495491 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
HCLS1-211ENST00000495491 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
HCLS1-211ENST00000495491 CUX2O14529 1486 aa24.81■■□□□ 1.56
HCLS1-211ENST00000495491 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
HCLS1-211ENST00000495491 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
HCLS1-211ENST00000495491 NESP48681 1621 aa24.62■■□□□ 1.53
HCLS1-211ENST00000495491 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
HCLS1-211ENST00000495491 PDS5BQ9NTI5 1447 aa24.47■■□□□ 1.51
HCLS1-211ENST00000495491 CADPSQ9ULU8 1353 aa24.44■■□□□ 1.5
HCLS1-211ENST00000495491 THOC2Q8NI27 1593 aaKnown RBP24.41■■□□□ 1.5
HCLS1-211ENST00000495491 WIZO95785 1651 aa24.37■■□□□ 1.49
HCLS1-211ENST00000495491 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
HCLS1-211ENST00000495491 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
HCLS1-211ENST00000495491 MRC2Q9UBG0 1479 aa24.21■■□□□ 1.47
HCLS1-211ENST00000495491 CFTRP13569 1480 aa24.2■■□□□ 1.47
HCLS1-211ENST00000495491 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
HCLS1-211ENST00000495491 WDR62O43379 1518 aa24.16■■□□□ 1.46
HCLS1-211ENST00000495491 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
HCLS1-211ENST00000495491 FANCD2Q9BXW9 1451 aa24.1■■□□□ 1.45
HCLS1-211ENST00000495491 CCDC88BA6NC98 1476 aa23.9■■□□□ 1.42
HCLS1-211ENST00000495491 URB2Q14146 1524 aaKnown RBP23.89■■□□□ 1.41
HCLS1-211ENST00000495491 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
HCLS1-211ENST00000495491 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
HCLS1-211ENST00000495491 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
HCLS1-211ENST00000495491 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
HCLS1-211ENST00000495491 OSCARQ8IYS5 282 aa23.64■■□□□ 1.37
HCLS1-211ENST00000495491 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
HCLS1-211ENST00000495491 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
HCLS1-211ENST00000495491 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
HCLS1-211ENST00000495491 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
HCLS1-211ENST00000495491 POLA1P09884 1462 aaPredicted RBP23.43■■□□□ 1.34
HCLS1-211ENST00000495491 EIF4G3O43432 1585 aaKnown RBP23.39■■□□□ 1.33
HCLS1-211ENST00000495491 AQRO60306 1485 aaKnown RBP eCLIP23.34■■□□□ 1.33
HCLS1-211ENST00000495491 SOGA1O94964 1423 aa23.32■■□□□ 1.32
HCLS1-211ENST00000495491 WDR97A6NE52 1622 aa23.31■■□□□ 1.32
HCLS1-211ENST00000495491 RAD54L2Q9Y4B4 1467 aa23.26■■□□□ 1.31
HCLS1-211ENST00000495491 CUX1P39880 1505 aa23.26■■□□□ 1.31
HCLS1-211ENST00000495491 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
HCLS1-211ENST00000495491 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
HCLS1-211ENST00000495491 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
HCLS1-211ENST00000495491 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
HCLS1-211ENST00000495491 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
HCLS1-211ENST00000495491 TDRD9Q8NDG6 1382 aaKnown RBP23.21■■□□□ 1.31
HCLS1-211ENST00000495491 MAGI1Q96QZ7 1491 aaPredicted RBP23.15■■□□□ 1.3
HCLS1-211ENST00000495491 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
HCLS1-211ENST00000495491 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
HCLS1-211ENST00000495491 CHD1O14646 1710 aa23.11■■□□□ 1.29
HCLS1-211ENST00000495491 SNAPC4Q5SXM2 1469 aa23.11■■□□□ 1.29
HCLS1-211ENST00000495491 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.29
HCLS1-211ENST00000495491 FBLN2P98095 1184 aa23.07■■□□□ 1.28
HCLS1-211ENST00000495491 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
HCLS1-211ENST00000495491 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
HCLS1-211ENST00000495491 CLASP1Q7Z460 1538 aa23.03■■□□□ 1.28
HCLS1-211ENST00000495491 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
HCLS1-211ENST00000495491 ARAP1Q96P48 1450 aa23■■□□□ 1.27
HCLS1-211ENST00000495491 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
HCLS1-211ENST00000495491 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
HCLS1-211ENST00000495491 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
HCLS1-211ENST00000495491 ABCA5Q8WWZ7 1642 aa22.97■■□□□ 1.27
HCLS1-211ENST00000495491 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
HCLS1-211ENST00000495491 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
HCLS1-211ENST00000495491 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
HCLS1-211ENST00000495491 GRIN2AQ12879 1464 aa22.81■■□□□ 1.24
HCLS1-211ENST00000495491 NUP160Q12769 1436 aa22.81■■□□□ 1.24
HCLS1-211ENST00000495491 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
HCLS1-211ENST00000495491 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
HCLS1-211ENST00000495491 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
HCLS1-211ENST00000495491 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
HCLS1-211ENST00000495491 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
HCLS1-211ENST00000495491 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
HCLS1-211ENST00000495491 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
HCLS1-211ENST00000495491 IGF1RP08069 1367 aa22.53■■□□□ 1.2
HCLS1-211ENST00000495491 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
HCLS1-211ENST00000495491 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
HCLS1-211ENST00000495491 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms