RNA–Protein interactions for RNA: ENST00000495488.5

PSEN2-208, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-208ENST00000495488 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
PSEN2-208ENST00000495488 CCDC180Q9P1Z9 1646 aa36.72■■■■□ 3.47
PSEN2-208ENST00000495488 ABCC9O60706 1549 aa35.41■■■■□ 3.26
PSEN2-208ENST00000495488 ZCCHC6Q5VYS8 1495 aaKnown RBP34.46■■■■□ 3.11
PSEN2-208ENST00000495488 NACADO15069 1562 aa34.36■■■■□ 3.09
PSEN2-208ENST00000495488 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
PSEN2-208ENST00000495488 MYO15BQ96JP2 1530 aa34.32■■■■□ 3.08
PSEN2-208ENST00000495488 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
PSEN2-208ENST00000495488 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
PSEN2-208ENST00000495488 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
PSEN2-208ENST00000495488 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
PSEN2-208ENST00000495488 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
PSEN2-208ENST00000495488 SHROOM4Q9ULL8 1493 aa33.06■■■□□ 2.88
PSEN2-208ENST00000495488 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.87
PSEN2-208ENST00000495488 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
PSEN2-208ENST00000495488 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
PSEN2-208ENST00000495488 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
PSEN2-208ENST00000495488 CECR2Q9BXF3 1484 aa32.02■■■□□ 2.72
PSEN2-208ENST00000495488 SMARCA4P51532 1647 aa32■■■□□ 2.71
PSEN2-208ENST00000495488 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
PSEN2-208ENST00000495488 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
PSEN2-208ENST00000495488 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
PSEN2-208ENST00000495488 SMARCA2P51531 1590 aa31.73■■■□□ 2.67
PSEN2-208ENST00000495488 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
PSEN2-208ENST00000495488 NCAPD3P42695 1498 aa31.65■■■□□ 2.66
PSEN2-208ENST00000495488 HMGXB3Q12766 1538 aa31.6■■■□□ 2.65
PSEN2-208ENST00000495488 WIZO95785 1651 aa31.46■■■□□ 2.63
PSEN2-208ENST00000495488 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
PSEN2-208ENST00000495488 BAZ1BQ9UIG0 1483 aaKnown RBP31.44■■■□□ 2.62
PSEN2-208ENST00000495488 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
PSEN2-208ENST00000495488 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
PSEN2-208ENST00000495488 NESP48681 1621 aa30.73■■■□□ 2.51
PSEN2-208ENST00000495488 CCDC88BA6NC98 1476 aa30.72■■■□□ 2.51
PSEN2-208ENST00000495488 CADPSQ9ULU8 1353 aa30.68■■■□□ 2.5
PSEN2-208ENST00000495488 SUPT5HO00267 1087 aaKnown RBP30.65■■■□□ 2.5
PSEN2-208ENST00000495488 CFTRP13569 1480 aa30.62■■■□□ 2.49
PSEN2-208ENST00000495488 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
PSEN2-208ENST00000495488 PDS5BQ9NTI5 1447 aa30.53■■■□□ 2.48
PSEN2-208ENST00000495488 KIF21AQ7Z4S6 1674 aa30.52■■■□□ 2.48
PSEN2-208ENST00000495488 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
PSEN2-208ENST00000495488 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
PSEN2-208ENST00000495488 FANCD2Q9BXW9 1451 aa30.35■■■□□ 2.45
PSEN2-208ENST00000495488 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
PSEN2-208ENST00000495488 MRC2Q9UBG0 1479 aa30.22■■■□□ 2.43
PSEN2-208ENST00000495488 CUX2O14529 1486 aa30.21■■■□□ 2.43
PSEN2-208ENST00000495488 WDR62O43379 1518 aa30.17■■■□□ 2.42
PSEN2-208ENST00000495488 URB2Q14146 1524 aaKnown RBP30.05■■■□□ 2.4
PSEN2-208ENST00000495488 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
PSEN2-208ENST00000495488 DNMBPQ6XZF7 1577 aa29.96■■■□□ 2.39
PSEN2-208ENST00000495488 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
PSEN2-208ENST00000495488 CUX1P39880 1505 aa29.78■■■□□ 2.36
PSEN2-208ENST00000495488 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
PSEN2-208ENST00000495488 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
PSEN2-208ENST00000495488 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
PSEN2-208ENST00000495488 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
PSEN2-208ENST00000495488 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
PSEN2-208ENST00000495488 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
PSEN2-208ENST00000495488 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
PSEN2-208ENST00000495488 SYNJ1O43426 1573 aa29.63■■■□□ 2.33
PSEN2-208ENST00000495488 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
PSEN2-208ENST00000495488 SOGA1O94964 1423 aa29.49■■■□□ 2.31
PSEN2-208ENST00000495488 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
PSEN2-208ENST00000495488 EIF4G3O43432 1585 aaKnown RBP29.47■■■□□ 2.31
PSEN2-208ENST00000495488 ZNF608Q9ULD9 1512 aaPredicted RBP29.45■■■□□ 2.31
PSEN2-208ENST00000495488 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
PSEN2-208ENST00000495488 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
PSEN2-208ENST00000495488 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.28
PSEN2-208ENST00000495488 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
PSEN2-208ENST00000495488 TDRD9Q8NDG6 1382 aaKnown RBP29.25■■■□□ 2.27
PSEN2-208ENST00000495488 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.26
PSEN2-208ENST00000495488 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
PSEN2-208ENST00000495488 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
PSEN2-208ENST00000495488 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
PSEN2-208ENST00000495488 SNAPC4Q5SXM2 1469 aa29.08■■■□□ 2.25
PSEN2-208ENST00000495488 CHD1O14646 1710 aa29.07■■■□□ 2.24
PSEN2-208ENST00000495488 KIF27Q86VH2 1401 aa29.02■■■□□ 2.24
PSEN2-208ENST00000495488 TRIM41Q8WV44 630 aa29.01■■■□□ 2.23
PSEN2-208ENST00000495488 ADAMTS12P58397 1594 aa29■■■□□ 2.23
PSEN2-208ENST00000495488 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
PSEN2-208ENST00000495488 CUL7Q14999 1698 aa28.93■■■□□ 2.22
PSEN2-208ENST00000495488 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
PSEN2-208ENST00000495488 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
PSEN2-208ENST00000495488 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
PSEN2-208ENST00000495488 DNAJC5Q9H3Z4 198 aa28.84■■■□□ 2.21
PSEN2-208ENST00000495488 IGF1RP08069 1367 aa28.83■■■□□ 2.21
PSEN2-208ENST00000495488 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
PSEN2-208ENST00000495488 CHMP7Q8WUX9 453 aaPredicted RBP28.8■■■□□ 2.2
PSEN2-208ENST00000495488 RUSC2Q8N2Y8 1516 aa28.78■■■□□ 2.2
PSEN2-208ENST00000495488 FBLN2P98095 1184 aa28.76■■■□□ 2.19
PSEN2-208ENST00000495488 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
PSEN2-208ENST00000495488 NUP160Q12769 1436 aa28.69■■■□□ 2.18
PSEN2-208ENST00000495488 EEA1Q15075 1411 aa28.69■■■□□ 2.18
PSEN2-208ENST00000495488 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
PSEN2-208ENST00000495488 CARMIL1Q5VZK9 1371 aa28.66■■■□□ 2.18
PSEN2-208ENST00000495488 RAPGEF2Q9Y4G8 1499 aa28.58■■■□□ 2.17
PSEN2-208ENST00000495488 PRXQ9BXM0 1461 aa28.56■■■□□ 2.16
PSEN2-208ENST00000495488 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
PSEN2-208ENST00000495488 RIMBP3CA6NJZ7 1639 aa28.5■■■□□ 2.15
PSEN2-208ENST00000495488 RIMBP3BA6NNM3 1639 aa28.5■■■□□ 2.15
PSEN2-208ENST00000495488 RIMBP3Q9UFD9 1639 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms