RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
RPRD1B-206ENST00000495457 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
RPRD1B-206ENST00000495457 ABCC9O60706 1549 aa31.22■■■□□ 2.59
RPRD1B-206ENST00000495457 RB1CC1Q8TDY2 1594 aa29.78■■■□□ 2.36
RPRD1B-206ENST00000495457 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
RPRD1B-206ENST00000495457 NACADO15069 1562 aa29.65■■■□□ 2.34
RPRD1B-206ENST00000495457 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
RPRD1B-206ENST00000495457 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
RPRD1B-206ENST00000495457 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
RPRD1B-206ENST00000495457 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
RPRD1B-206ENST00000495457 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
RPRD1B-206ENST00000495457 DNAJC5BQ9UF47 199 aa29.05■■■□□ 2.24
RPRD1B-206ENST00000495457 BICRAQ9NZM4 1560 aa28.94■■■□□ 2.22
RPRD1B-206ENST00000495457 SCRIBQ14160 1630 aa28.72■■■□□ 2.19
RPRD1B-206ENST00000495457 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
RPRD1B-206ENST00000495457 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.11
RPRD1B-206ENST00000495457 CC2D2AQ9P2K1 1620 aa28.18■■■□□ 2.1
RPRD1B-206ENST00000495457 CECR2Q9BXF3 1484 aa28.07■■■□□ 2.08
RPRD1B-206ENST00000495457 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
RPRD1B-206ENST00000495457 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
RPRD1B-206ENST00000495457 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
RPRD1B-206ENST00000495457 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
RPRD1B-206ENST00000495457 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
RPRD1B-206ENST00000495457 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
RPRD1B-206ENST00000495457 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
RPRD1B-206ENST00000495457 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
RPRD1B-206ENST00000495457 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
RPRD1B-206ENST00000495457 NESP48681 1621 aa26.92■■□□□ 1.9
RPRD1B-206ENST00000495457 ERCC6Q03468 1493 aa26.91■■□□□ 1.9
RPRD1B-206ENST00000495457 WIZO95785 1651 aa26.85■■□□□ 1.89
RPRD1B-206ENST00000495457 RSF1Q96T23 1441 aaPredicted RBP26.74■■□□□ 1.87
RPRD1B-206ENST00000495457 CUX2O14529 1486 aa26.72■■□□□ 1.87
RPRD1B-206ENST00000495457 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
RPRD1B-206ENST00000495457 CADPSQ9ULU8 1353 aa26.61■■□□□ 1.85
RPRD1B-206ENST00000495457 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
RPRD1B-206ENST00000495457 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
RPRD1B-206ENST00000495457 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
RPRD1B-206ENST00000495457 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
RPRD1B-206ENST00000495457 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
RPRD1B-206ENST00000495457 CFTRP13569 1480 aa26.36■■□□□ 1.81
RPRD1B-206ENST00000495457 MRC2Q9UBG0 1479 aa26.33■■□□□ 1.81
RPRD1B-206ENST00000495457 FANCD2Q9BXW9 1451 aa26.3■■□□□ 1.8
RPRD1B-206ENST00000495457 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
RPRD1B-206ENST00000495457 CCDC88BA6NC98 1476 aa26.25■■□□□ 1.79
RPRD1B-206ENST00000495457 WDR62O43379 1518 aa26.24■■□□□ 1.79
RPRD1B-206ENST00000495457 URB2Q14146 1524 aaKnown RBP26.08■■□□□ 1.77
RPRD1B-206ENST00000495457 PRDM2Q13029 1718 aa26■■□□□ 1.75
RPRD1B-206ENST00000495457 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
RPRD1B-206ENST00000495457 TOPBP1Q92547 1522 aa25.83■■□□□ 1.73
RPRD1B-206ENST00000495457 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
RPRD1B-206ENST00000495457 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
RPRD1B-206ENST00000495457 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
RPRD1B-206ENST00000495457 ZNF608Q9ULD9 1512 aaPredicted RBP25.72■■□□□ 1.71
RPRD1B-206ENST00000495457 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
RPRD1B-206ENST00000495457 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
RPRD1B-206ENST00000495457 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
RPRD1B-206ENST00000495457 EIF4G3O43432 1585 aaKnown RBP25.54■■□□□ 1.68
RPRD1B-206ENST00000495457 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.681e-7■■□□□ 12.9
RPRD1B-206ENST00000495457 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
RPRD1B-206ENST00000495457 CUX1P39880 1505 aa25.52■■□□□ 1.68
RPRD1B-206ENST00000495457 FGD5Q6ZNL6 1462 aa25.49■■□□□ 1.67
RPRD1B-206ENST00000495457 SOGA1O94964 1423 aa25.49■■□□□ 1.67
RPRD1B-206ENST00000495457 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
RPRD1B-206ENST00000495457 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
RPRD1B-206ENST00000495457 FBLN2P98095 1184 aa25.3■■□□□ 1.64
RPRD1B-206ENST00000495457 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
RPRD1B-206ENST00000495457 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
RPRD1B-206ENST00000495457 CHD1O14646 1710 aa25.26■■□□□ 1.63
RPRD1B-206ENST00000495457 GRIN2BQ13224 1484 aa25.21■■□□□ 1.63
RPRD1B-206ENST00000495457 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
RPRD1B-206ENST00000495457 ABCA10Q8WWZ4 1543 aa25.2■■□□□ 1.62
RPRD1B-206ENST00000495457 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
RPRD1B-206ENST00000495457 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
RPRD1B-206ENST00000495457 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
RPRD1B-206ENST00000495457 GAPVD1Q14C86 1478 aa25.18■■□□□ 1.62
RPRD1B-206ENST00000495457 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
RPRD1B-206ENST00000495457 MAGI1Q96QZ7 1491 aaPredicted RBP25.17■■□□□ 1.62
RPRD1B-206ENST00000495457 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
RPRD1B-206ENST00000495457 TOP2BQ02880 1626 aa25.15■■□□□ 1.62
RPRD1B-206ENST00000495457 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
RPRD1B-206ENST00000495457 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
RPRD1B-206ENST00000495457 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
RPRD1B-206ENST00000495457 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
RPRD1B-206ENST00000495457 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
RPRD1B-206ENST00000495457 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
RPRD1B-206ENST00000495457 CYB5RLQ6IPT4 315 aa25.01■■□□□ 1.59
RPRD1B-206ENST00000495457 ARAP1Q96P48 1450 aa24.96■■□□□ 1.59
RPRD1B-206ENST00000495457 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
RPRD1B-206ENST00000495457 GRIN2AQ12879 1464 aa24.9■■□□□ 1.58
RPRD1B-206ENST00000495457 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
RPRD1B-206ENST00000495457 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
RPRD1B-206ENST00000495457 NUP160Q12769 1436 aa24.81■■□□□ 1.56
RPRD1B-206ENST00000495457 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
RPRD1B-206ENST00000495457 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
RPRD1B-206ENST00000495457 ERCC6L2Q5T890 1561 aa24.7■■□□□ 1.54
RPRD1B-206ENST00000495457 IGF1RP08069 1367 aa24.67■■□□□ 1.54
RPRD1B-206ENST00000495457 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
RPRD1B-206ENST00000495457 TRHP20396 242 aaPredicted RBP24.61■■□□□ 1.53
RPRD1B-206ENST00000495457 JPH4Q96JJ6 628 aa24.58■■□□□ 1.53
RPRD1B-206ENST00000495457 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms