RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 NISCHQ9Y2I1 1504 aa42.57■■■■■ 4.41
CTNS-207ENST00000495445 CCDC180Q9P1Z9 1646 aa37.9■■■■□ 3.66
CTNS-207ENST00000495445 ABCC9O60706 1549 aa37.37■■■■□ 3.57
CTNS-207ENST00000495445 RB1CC1Q8TDY2 1594 aa35.82■■■■□ 3.32
CTNS-207ENST00000495445 NACADO15069 1562 aa35.76■■■■□ 3.31
CTNS-207ENST00000495445 DCAF8L2P0C7V8 631 aa35.64■■■■□ 3.3
CTNS-207ENST00000495445 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.27
CTNS-207ENST00000495445 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
CTNS-207ENST00000495445 DCAF1Q9Y4B6 1507 aa35.24■■■■□ 3.23
CTNS-207ENST00000495445 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
CTNS-207ENST00000495445 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
CTNS-207ENST00000495445 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
CTNS-207ENST00000495445 DNAJC5BQ9UF47 199 aa34.73■■■■□ 3.15
CTNS-207ENST00000495445 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
CTNS-207ENST00000495445 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
CTNS-207ENST00000495445 EIF4G1Q04637 1599 aaKnown RBP33.88■■■■□ 3.01
CTNS-207ENST00000495445 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
CTNS-207ENST00000495445 CECR2Q9BXF3 1484 aa33.63■■■□□ 2.97
CTNS-207ENST00000495445 NCAPD3P42695 1498 aa33.06■■■□□ 2.88
CTNS-207ENST00000495445 SMARCA4P51532 1647 aa33.04■■■□□ 2.88
CTNS-207ENST00000495445 ATAD2BQ9ULI0 1458 aa32.99■■■□□ 2.87
CTNS-207ENST00000495445 BAZ1AQ9NRL2 1556 aaPredicted RBP32.96■■■□□ 2.87
CTNS-207ENST00000495445 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
CTNS-207ENST00000495445 MROH2BQ7Z745 1585 aa32.79■■■□□ 2.84
CTNS-207ENST00000495445 HMGXB3Q12766 1538 aa32.79■■■□□ 2.84
CTNS-207ENST00000495445 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
CTNS-207ENST00000495445 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
CTNS-207ENST00000495445 WIZO95785 1651 aa32.38■■■□□ 2.77
CTNS-207ENST00000495445 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
CTNS-207ENST00000495445 NESP48681 1621 aa32.29■■■□□ 2.76
CTNS-207ENST00000495445 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
CTNS-207ENST00000495445 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
CTNS-207ENST00000495445 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.72
CTNS-207ENST00000495445 CUX2O14529 1486 aa32.03■■■□□ 2.72
CTNS-207ENST00000495445 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
CTNS-207ENST00000495445 PDS5BQ9NTI5 1447 aa31.97■■■□□ 2.71
CTNS-207ENST00000495445 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
CTNS-207ENST00000495445 THOC2Q8NI27 1593 aaKnown RBP31.82■■■□□ 2.68
CTNS-207ENST00000495445 CFTRP13569 1480 aa31.81■■■□□ 2.68
CTNS-207ENST00000495445 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
CTNS-207ENST00000495445 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
CTNS-207ENST00000495445 MRC2Q9UBG0 1479 aa31.63■■■□□ 2.65
CTNS-207ENST00000495445 CEP164Q9UPV0 1460 aa31.59■■■□□ 2.65
CTNS-207ENST00000495445 WDR62O43379 1518 aa31.54■■■□□ 2.64
CTNS-207ENST00000495445 DNAJC5Q9H3Z4 198 aa31.49■■■□□ 2.63
CTNS-207ENST00000495445 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
CTNS-207ENST00000495445 URB2Q14146 1524 aaKnown RBP31.36■■■□□ 2.61
CTNS-207ENST00000495445 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
CTNS-207ENST00000495445 ABCC8Q09428 1581 aa31.11■■■□□ 2.57
CTNS-207ENST00000495445 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
CTNS-207ENST00000495445 DNMBPQ6XZF7 1577 aa31.01■■■□□ 2.56
CTNS-207ENST00000495445 IFT140Q96RY7 1462 aa30.98■■■□□ 2.55
CTNS-207ENST00000495445 ZNF608Q9ULD9 1512 aaPredicted RBP30.88■■■□□ 2.53
CTNS-207ENST00000495445 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.53
CTNS-207ENST00000495445 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
CTNS-207ENST00000495445 CUX1P39880 1505 aa30.77■■■□□ 2.52
CTNS-207ENST00000495445 OSCARQ8IYS5 282 aa30.72■■■□□ 2.51
CTNS-207ENST00000495445 SOGA1O94964 1423 aa30.72■■■□□ 2.51
CTNS-207ENST00000495445 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.51
CTNS-207ENST00000495445 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
CTNS-207ENST00000495445 FGD5Q6ZNL6 1462 aa30.68■■■□□ 2.5
CTNS-207ENST00000495445 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
CTNS-207ENST00000495445 TDRD9Q8NDG6 1382 aaKnown RBP30.57■■■□□ 2.48
CTNS-207ENST00000495445 WDR97A6NE52 1622 aa30.51■■■□□ 2.48
CTNS-207ENST00000495445 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
CTNS-207ENST00000495445 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
CTNS-207ENST00000495445 TOP2BQ02880 1626 aa30.41■■■□□ 2.46
CTNS-207ENST00000495445 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
CTNS-207ENST00000495445 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
CTNS-207ENST00000495445 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
CTNS-207ENST00000495445 GAPVD1Q14C86 1478 aa30.34■■■□□ 2.45
CTNS-207ENST00000495445 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
CTNS-207ENST00000495445 FBLN2P98095 1184 aa30.32■■■□□ 2.44
CTNS-207ENST00000495445 CHD1O14646 1710 aa30.32■■■□□ 2.44
CTNS-207ENST00000495445 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
CTNS-207ENST00000495445 ABCA5Q8WWZ7 1642 aa30.26■■■□□ 2.44
CTNS-207ENST00000495445 CHMP7Q8WUX9 453 aaPredicted RBP30.24■■■□□ 2.43
CTNS-207ENST00000495445 SYNJ2O15056 1496 aa30.2■■■□□ 2.43
CTNS-207ENST00000495445 TRIM41Q8WV44 630 aa30.2■■■□□ 2.43
CTNS-207ENST00000495445 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
CTNS-207ENST00000495445 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
CTNS-207ENST00000495445 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
CTNS-207ENST00000495445 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
CTNS-207ENST00000495445 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
CTNS-207ENST00000495445 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
CTNS-207ENST00000495445 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
CTNS-207ENST00000495445 FHAD1B1AJZ9 1412 aa29.98■■■□□ 2.39
CTNS-207ENST00000495445 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
CTNS-207ENST00000495445 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
CTNS-207ENST00000495445 CYB5RLQ6IPT4 315 aa29.92■■■□□ 2.38
CTNS-207ENST00000495445 NUP160Q12769 1436 aa29.89■■■□□ 2.38
CTNS-207ENST00000495445 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
CTNS-207ENST00000495445 IGF1RP08069 1367 aa29.86■■■□□ 2.37
CTNS-207ENST00000495445 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
CTNS-207ENST00000495445 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
CTNS-207ENST00000495445 SHROOM2Q13796 1616 aa29.67■■■□□ 2.34
CTNS-207ENST00000495445 CUL7Q14999 1698 aa29.63■■■□□ 2.33
CTNS-207ENST00000495445 JPH4Q96JJ6 628 aa29.63■■■□□ 2.33
CTNS-207ENST00000495445 ERCC6L2Q5T890 1561 aa29.62■■■□□ 2.33
CTNS-207ENST00000495445 CARMIL1Q5VZK9 1371 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms