RNA–Protein interactions for RNA: ENST00000495377.6

RBFOX2-214, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-214ENST00000495377 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
RBFOX2-214ENST00000495377 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
RBFOX2-214ENST00000495377 AEBP2Q6ZN18 517 aaPredicted RBP23.89■■□□□ 1.41
RBFOX2-214ENST00000495377 ABCC9O60706 1549 aa23.87■■□□□ 1.41
RBFOX2-214ENST00000495377 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
RBFOX2-214ENST00000495377 DCAF1Q9Y4B6 1507 aa23.59■■□□□ 1.37
RBFOX2-214ENST00000495377 MYO15BQ96JP2 1530 aa23.47■■□□□ 1.35
RBFOX2-214ENST00000495377 DCAF8L2P0C7V8 631 aa23.46■■□□□ 1.35
RBFOX2-214ENST00000495377 NACADO15069 1562 aa23.42■■□□□ 1.34
RBFOX2-214ENST00000495377 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
RBFOX2-214ENST00000495377 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
RBFOX2-214ENST00000495377 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
RBFOX2-214ENST00000495377 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
RBFOX2-214ENST00000495377 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
RBFOX2-214ENST00000495377 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
RBFOX2-214ENST00000495377 PABPN1Q86U42 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
RBFOX2-214ENST00000495377 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
RBFOX2-214ENST00000495377 BAZ1AQ9NRL2 1556 aaPredicted RBP22.03■■□□□ 1.12
RBFOX2-214ENST00000495377 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
RBFOX2-214ENST00000495377 EIF4G1Q04637 1599 aaKnown RBP21.91■■□□□ 1.1
RBFOX2-214ENST00000495377 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
RBFOX2-214ENST00000495377 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
RBFOX2-214ENST00000495377 WIZO95785 1651 aa21.79■■□□□ 1.08
RBFOX2-214ENST00000495377 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
RBFOX2-214ENST00000495377 SUPT5HO00267 1087 aaKnown RBP21.72■■□□□ 1.07
RBFOX2-214ENST00000495377 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
RBFOX2-214ENST00000495377 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
RBFOX2-214ENST00000495377 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
RBFOX2-214ENST00000495377 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
RBFOX2-214ENST00000495377 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
RBFOX2-214ENST00000495377 TOP2AP11388 1531 aaKnown RBP21.54■■□□□ 1.04
RBFOX2-214ENST00000495377 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
RBFOX2-214ENST00000495377 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
RBFOX2-214ENST00000495377 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
RBFOX2-214ENST00000495377 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
RBFOX2-214ENST00000495377 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
RBFOX2-214ENST00000495377 CFTRP13569 1480 aa20.95■□□□□ 0.94
RBFOX2-214ENST00000495377 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
RBFOX2-214ENST00000495377 NESP48681 1621 aa20.84■□□□□ 0.93
RBFOX2-214ENST00000495377 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
RBFOX2-214ENST00000495377 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
RBFOX2-214ENST00000495377 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
RBFOX2-214ENST00000495377 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
RBFOX2-214ENST00000495377 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
RBFOX2-214ENST00000495377 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
RBFOX2-214ENST00000495377 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
RBFOX2-214ENST00000495377 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
RBFOX2-214ENST00000495377 SYNJ1O43426 1573 aa20.56■□□□□ 0.88
RBFOX2-214ENST00000495377 ERCC6Q03468 1493 aa20.55■□□□□ 0.88
RBFOX2-214ENST00000495377 DNMBPQ6XZF7 1577 aa20.53■□□□□ 0.88
RBFOX2-214ENST00000495377 CUX1P39880 1505 aa20.53■□□□□ 0.88
RBFOX2-214ENST00000495377 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
RBFOX2-214ENST00000495377 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
RBFOX2-214ENST00000495377 URB2Q14146 1524 aaKnown RBP20.47■□□□□ 0.87
RBFOX2-214ENST00000495377 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
RBFOX2-214ENST00000495377 THOC2Q8NI27 1593 aaKnown RBP20.46■□□□□ 0.87
RBFOX2-214ENST00000495377 WDR62O43379 1518 aa20.42■□□□□ 0.86
RBFOX2-214ENST00000495377 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
RBFOX2-214ENST00000495377 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
RBFOX2-214ENST00000495377 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
RBFOX2-214ENST00000495377 TARBP1Q13395 1621 aaKnown RBP20.24■□□□□ 0.83
RBFOX2-214ENST00000495377 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
RBFOX2-214ENST00000495377 SOGA1O94964 1423 aa20.24■□□□□ 0.83
RBFOX2-214ENST00000495377 CUX2O14529 1486 aa20.2■□□□□ 0.82
RBFOX2-214ENST00000495377 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
RBFOX2-214ENST00000495377 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
RBFOX2-214ENST00000495377 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
RBFOX2-214ENST00000495377 EEA1Q15075 1411 aa20.17■□□□□ 0.82
RBFOX2-214ENST00000495377 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
RBFOX2-214ENST00000495377 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
RBFOX2-214ENST00000495377 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
RBFOX2-214ENST00000495377 RUSC2Q8N2Y8 1516 aa20.11■□□□□ 0.81
RBFOX2-214ENST00000495377 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
RBFOX2-214ENST00000495377 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
RBFOX2-214ENST00000495377 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
RBFOX2-214ENST00000495377 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
RBFOX2-214ENST00000495377 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
RBFOX2-214ENST00000495377 CSRNP3Q8WYN3 585 aa20.01■□□□□ 0.79
RBFOX2-214ENST00000495377 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
RBFOX2-214ENST00000495377 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
RBFOX2-214ENST00000495377 CUL7Q14999 1698 aa20■□□□□ 0.79
RBFOX2-214ENST00000495377 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
RBFOX2-214ENST00000495377 KIF21BO75037 1637 aa19.96■□□□□ 0.79
RBFOX2-214ENST00000495377 GRIN2BQ13224 1484 aa19.94■□□□□ 0.78
RBFOX2-214ENST00000495377 IGF1RP08069 1367 aa19.94■□□□□ 0.78
RBFOX2-214ENST00000495377 PRXQ9BXM0 1461 aa19.88■□□□□ 0.77
RBFOX2-214ENST00000495377 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
RBFOX2-214ENST00000495377 CARMIL1Q5VZK9 1371 aa19.85■□□□□ 0.77
RBFOX2-214ENST00000495377 MAGI1Q96QZ7 1491 aaPredicted RBP19.85■□□□□ 0.77
RBFOX2-214ENST00000495377 GOLGA3Q08378 1498 aa19.83■□□□□ 0.76
RBFOX2-214ENST00000495377 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.76
RBFOX2-214ENST00000495377 SNAPC4Q5SXM2 1469 aa19.81■□□□□ 0.76
RBFOX2-214ENST00000495377 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
RBFOX2-214ENST00000495377 CTTNBP2Q8WZ74 1663 aa19.78■□□□□ 0.76
RBFOX2-214ENST00000495377 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
RBFOX2-214ENST00000495377 CHD1O14646 1710 aa19.76■□□□□ 0.75
RBFOX2-214ENST00000495377 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
RBFOX2-214ENST00000495377 EHMT2Q96KQ7 1210 aa19.71■□□□□ 0.75
RBFOX2-214ENST00000495377 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
RBFOX2-214ENST00000495377 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms