RNA–Protein interactions for RNA: ENST00000495217.1

PRDM15-215, Transcript of PR/SET domain 15, humanhuman

TSL 3

Gene PRDM15, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-215ENST00000495217 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
PRDM15-215ENST00000495217 ABCC9O60706 1549 aa29.59■■■□□ 2.33
PRDM15-215ENST00000495217 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
PRDM15-215ENST00000495217 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
PRDM15-215ENST00000495217 NACADO15069 1562 aa27.96■■■□□ 2.07
PRDM15-215ENST00000495217 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
PRDM15-215ENST00000495217 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
PRDM15-215ENST00000495217 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
PRDM15-215ENST00000495217 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
PRDM15-215ENST00000495217 PABPN1Q86U42 306 aaKnown RBP eCLIP27.47■■□□□ 1.99
PRDM15-215ENST00000495217 BICRAQ9NZM4 1560 aa27.38■■□□□ 1.97
PRDM15-215ENST00000495217 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
PRDM15-215ENST00000495217 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
PRDM15-215ENST00000495217 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
PRDM15-215ENST00000495217 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
PRDM15-215ENST00000495217 CC2D2AQ9P2K1 1620 aa26.74■■□□□ 1.87
PRDM15-215ENST00000495217 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
PRDM15-215ENST00000495217 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
PRDM15-215ENST00000495217 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
PRDM15-215ENST00000495217 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
PRDM15-215ENST00000495217 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
PRDM15-215ENST00000495217 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
PRDM15-215ENST00000495217 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
PRDM15-215ENST00000495217 CUX2O14529 1486 aa25.56■■□□□ 1.68
PRDM15-215ENST00000495217 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
PRDM15-215ENST00000495217 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
PRDM15-215ENST00000495217 DNAJC5Q9H3Z4 198 aa25.53■■□□□ 1.68
PRDM15-215ENST00000495217 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
PRDM15-215ENST00000495217 BAZ1BQ9UIG0 1483 aaKnown RBP25.47■■□□□ 1.67
PRDM15-215ENST00000495217 NESP48681 1621 aa25.41■■□□□ 1.66
PRDM15-215ENST00000495217 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
PRDM15-215ENST00000495217 LAMC3Q9Y6N6 1575 aa25.23■■□□□ 1.63
PRDM15-215ENST00000495217 THOC2Q8NI27 1593 aaKnown RBP25.22■■□□□ 1.63
PRDM15-215ENST00000495217 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
PRDM15-215ENST00000495217 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
PRDM15-215ENST00000495217 WIZO95785 1651 aa25.01■■□□□ 1.59
PRDM15-215ENST00000495217 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
PRDM15-215ENST00000495217 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
PRDM15-215ENST00000495217 WDR62O43379 1518 aa24.86■■□□□ 1.57
PRDM15-215ENST00000495217 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
PRDM15-215ENST00000495217 CEP164Q9UPV0 1460 aa24.77■■□□□ 1.56
PRDM15-215ENST00000495217 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
PRDM15-215ENST00000495217 CFTRP13569 1480 aa24.74■■□□□ 1.55
PRDM15-215ENST00000495217 FANCD2Q9BXW9 1451 aa24.73■■□□□ 1.55
PRDM15-215ENST00000495217 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
PRDM15-215ENST00000495217 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
PRDM15-215ENST00000495217 CCDC88BA6NC98 1476 aa24.42■■□□□ 1.5
PRDM15-215ENST00000495217 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
PRDM15-215ENST00000495217 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
PRDM15-215ENST00000495217 TOPBP1Q92547 1522 aa24.27■■□□□ 1.48
PRDM15-215ENST00000495217 OSCARQ8IYS5 282 aa24.26■■□□□ 1.47
PRDM15-215ENST00000495217 ZNF608Q9ULD9 1512 aaPredicted RBP24.25■■□□□ 1.47
PRDM15-215ENST00000495217 DNMBPQ6XZF7 1577 aa24.19■■□□□ 1.46
PRDM15-215ENST00000495217 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
PRDM15-215ENST00000495217 EIF4G3O43432 1585 aaKnown RBP24.14■■□□□ 1.45
PRDM15-215ENST00000495217 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
PRDM15-215ENST00000495217 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
PRDM15-215ENST00000495217 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
PRDM15-215ENST00000495217 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
PRDM15-215ENST00000495217 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
PRDM15-215ENST00000495217 ARHGEF11O15085 1522 aa24■■□□□ 1.43
PRDM15-215ENST00000495217 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.43
PRDM15-215ENST00000495217 CHD1O14646 1710 aa23.91■■□□□ 1.42
PRDM15-215ENST00000495217 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
PRDM15-215ENST00000495217 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
PRDM15-215ENST00000495217 SOGA1O94964 1423 aa23.84■■□□□ 1.41
PRDM15-215ENST00000495217 CUX1P39880 1505 aa23.84■■□□□ 1.41
PRDM15-215ENST00000495217 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
PRDM15-215ENST00000495217 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
PRDM15-215ENST00000495217 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
PRDM15-215ENST00000495217 ARAP1Q96P48 1450 aa23.77■■□□□ 1.4
PRDM15-215ENST00000495217 FBLN2P98095 1184 aa23.74■■□□□ 1.39
PRDM15-215ENST00000495217 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
PRDM15-215ENST00000495217 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
PRDM15-215ENST00000495217 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
PRDM15-215ENST00000495217 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
PRDM15-215ENST00000495217 SYNJ1O43426 1573 aa23.64■■□□□ 1.37
PRDM15-215ENST00000495217 SYNJ2O15056 1496 aa23.63■■□□□ 1.37
PRDM15-215ENST00000495217 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
PRDM15-215ENST00000495217 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
PRDM15-215ENST00000495217 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
PRDM15-215ENST00000495217 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
PRDM15-215ENST00000495217 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
PRDM15-215ENST00000495217 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
PRDM15-215ENST00000495217 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
PRDM15-215ENST00000495217 BIVM-ERCC5R4GMW8 1640 aa23.44■■□□□ 1.34
PRDM15-215ENST00000495217 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
PRDM15-215ENST00000495217 ADAMTS12P58397 1594 aa23.43■■□□□ 1.34
PRDM15-215ENST00000495217 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
PRDM15-215ENST00000495217 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
PRDM15-215ENST00000495217 NUP160Q12769 1436 aa23.35■■□□□ 1.33
PRDM15-215ENST00000495217 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
PRDM15-215ENST00000495217 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
PRDM15-215ENST00000495217 FHAD1B1AJZ9 1412 aa23.3■■□□□ 1.32
PRDM15-215ENST00000495217 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
PRDM15-215ENST00000495217 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
PRDM15-215ENST00000495217 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
PRDM15-215ENST00000495217 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
PRDM15-215ENST00000495217 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
PRDM15-215ENST00000495217 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms