RNA–Protein interactions for RNA: ENST00000495193.3

RN7SL78P-201, Transcript of RNA, 7SL, cytoplasmic 78, pseudogene, humanhuman

BASIC

Gene RN7SL78P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL78P-201ENST00000495193 NISCHQ9Y2I1 1504 aa22.14■■□□□ 1.13
RN7SL78P-201ENST00000495193 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
RN7SL78P-201ENST00000495193 ABCC9O60706 1549 aa19.35■□□□□ 0.69
RN7SL78P-201ENST00000495193 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
RN7SL78P-201ENST00000495193 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
RN7SL78P-201ENST00000495193 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
RN7SL78P-201ENST00000495193 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
RN7SL78P-201ENST00000495193 NACADO15069 1562 aa18.46■□□□□ 0.55
RN7SL78P-201ENST00000495193 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
RN7SL78P-201ENST00000495193 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
RN7SL78P-201ENST00000495193 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
RN7SL78P-201ENST00000495193 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
RN7SL78P-201ENST00000495193 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
RN7SL78P-201ENST00000495193 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
RN7SL78P-201ENST00000495193 BICRAQ9NZM4 1560 aa17.77■□□□□ 0.44
RN7SL78P-201ENST00000495193 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
RN7SL78P-201ENST00000495193 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
RN7SL78P-201ENST00000495193 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
RN7SL78P-201ENST00000495193 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
RN7SL78P-201ENST00000495193 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
RN7SL78P-201ENST00000495193 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
RN7SL78P-201ENST00000495193 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
RN7SL78P-201ENST00000495193 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
RN7SL78P-201ENST00000495193 NCAPD3P42695 1498 aa17■□□□□ 0.31
RN7SL78P-201ENST00000495193 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
RN7SL78P-201ENST00000495193 ATAD2BQ9ULI0 1458 aa16.98■□□□□ 0.31
RN7SL78P-201ENST00000495193 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
RN7SL78P-201ENST00000495193 CUX2O14529 1486 aa16.92■□□□□ 0.3
RN7SL78P-201ENST00000495193 RSF1Q96T23 1441 aaPredicted RBP16.9■□□□□ 0.3
RN7SL78P-201ENST00000495193 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
RN7SL78P-201ENST00000495193 WIZO95785 1651 aa16.81■□□□□ 0.28
RN7SL78P-201ENST00000495193 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
RN7SL78P-201ENST00000495193 ERCC6Q03468 1493 aa16.68■□□□□ 0.26
RN7SL78P-201ENST00000495193 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
RN7SL78P-201ENST00000495193 NESP48681 1621 aa16.51■□□□□ 0.23
RN7SL78P-201ENST00000495193 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
RN7SL78P-201ENST00000495193 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
RN7SL78P-201ENST00000495193 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
RN7SL78P-201ENST00000495193 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
RN7SL78P-201ENST00000495193 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
RN7SL78P-201ENST00000495193 CFTRP13569 1480 aa16.43■□□□□ 0.22
RN7SL78P-201ENST00000495193 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
RN7SL78P-201ENST00000495193 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
RN7SL78P-201ENST00000495193 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
RN7SL78P-201ENST00000495193 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
RN7SL78P-201ENST00000495193 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
RN7SL78P-201ENST00000495193 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
RN7SL78P-201ENST00000495193 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
RN7SL78P-201ENST00000495193 WDR62O43379 1518 aa16.14■□□□□ 0.17
RN7SL78P-201ENST00000495193 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
RN7SL78P-201ENST00000495193 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
RN7SL78P-201ENST00000495193 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
RN7SL78P-201ENST00000495193 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
RN7SL78P-201ENST00000495193 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 CUX1P39880 1505 aa15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
RN7SL78P-201ENST00000495193 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
RN7SL78P-201ENST00000495193 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
RN7SL78P-201ENST00000495193 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
RN7SL78P-201ENST00000495193 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
RN7SL78P-201ENST00000495193 FGD5Q6ZNL6 1462 aa15.86■□□□□ 0.13
RN7SL78P-201ENST00000495193 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
RN7SL78P-201ENST00000495193 SYNJ1O43426 1573 aa15.85■□□□□ 0.13
RN7SL78P-201ENST00000495193 SOGA1O94964 1423 aa15.82■□□□□ 0.12
RN7SL78P-201ENST00000495193 ARHGEF11O15085 1522 aa15.81■□□□□ 0.12
RN7SL78P-201ENST00000495193 ABCA10Q8WWZ4 1543 aa15.79■□□□□ 0.12
RN7SL78P-201ENST00000495193 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
RN7SL78P-201ENST00000495193 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
RN7SL78P-201ENST00000495193 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
RN7SL78P-201ENST00000495193 ABCA5Q8WWZ7 1642 aa15.69■□□□□ 0.1
RN7SL78P-201ENST00000495193 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
RN7SL78P-201ENST00000495193 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
RN7SL78P-201ENST00000495193 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
RN7SL78P-201ENST00000495193 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
RN7SL78P-201ENST00000495193 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
RN7SL78P-201ENST00000495193 MAGI1Q96QZ7 1491 aaPredicted RBP15.64■□□□□ 0.09
RN7SL78P-201ENST00000495193 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
RN7SL78P-201ENST00000495193 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
RN7SL78P-201ENST00000495193 KIF27Q86VH2 1401 aa15.62■□□□□ 0.09
RN7SL78P-201ENST00000495193 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
RN7SL78P-201ENST00000495193 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
RN7SL78P-201ENST00000495193 CHD1O14646 1710 aa15.57■□□□□ 0.08
RN7SL78P-201ENST00000495193 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
RN7SL78P-201ENST00000495193 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
RN7SL78P-201ENST00000495193 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
RN7SL78P-201ENST00000495193 EEA1Q15075 1411 aa15.53■□□□□ 0.08
RN7SL78P-201ENST00000495193 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
RN7SL78P-201ENST00000495193 CUL7Q14999 1698 aa15.53■□□□□ 0.08
RN7SL78P-201ENST00000495193 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
RN7SL78P-201ENST00000495193 ADAMTS12P58397 1594 aa15.51■□□□□ 0.07
RN7SL78P-201ENST00000495193 IGF1RP08069 1367 aa15.5■□□□□ 0.07
RN7SL78P-201ENST00000495193 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
RN7SL78P-201ENST00000495193 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
RN7SL78P-201ENST00000495193 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
RN7SL78P-201ENST00000495193 RUSC2Q8N2Y8 1516 aa15.39■□□□□ 0.05
RN7SL78P-201ENST00000495193 NUP160Q12769 1436 aa15.39■□□□□ 0.05
RN7SL78P-201ENST00000495193 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms