RNA–Protein interactions for RNA: ENST00000495176.5

CYTH3-211, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-211ENST00000495176 NISCHQ9Y2I1 1504 aa44.29■■■■■ 4.68
CYTH3-211ENST00000495176 CCDC180Q9P1Z9 1646 aa39.58■■■■□ 3.93
CYTH3-211ENST00000495176 ABCC9O60706 1549 aa39.15■■■■□ 3.86
CYTH3-211ENST00000495176 DCAF8L2P0C7V8 631 aa37.53■■■■□ 3.6
CYTH3-211ENST00000495176 RB1CC1Q8TDY2 1594 aa37.46■■■■□ 3.59
CYTH3-211ENST00000495176 NACADO15069 1562 aa37.3■■■■□ 3.56
CYTH3-211ENST00000495176 MYO15BQ96JP2 1530 aa36.9■■■■□ 3.5
CYTH3-211ENST00000495176 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
CYTH3-211ENST00000495176 PABPN1Q86U42 306 aaKnown RBP eCLIP36.65■■■■□ 3.46
CYTH3-211ENST00000495176 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
CYTH3-211ENST00000495176 DCAF1Q9Y4B6 1507 aa36.6■■■■□ 3.45
CYTH3-211ENST00000495176 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
CYTH3-211ENST00000495176 BICRAQ9NZM4 1560 aa36.26■■■■□ 3.39
CYTH3-211ENST00000495176 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
CYTH3-211ENST00000495176 SHROOM4Q9ULL8 1493 aa35.86■■■■□ 3.33
CYTH3-211ENST00000495176 EIF4G1Q04637 1599 aaKnown RBP35.38■■■■□ 3.25
CYTH3-211ENST00000495176 CC2D2AQ9P2K1 1620 aa35.35■■■■□ 3.25
CYTH3-211ENST00000495176 CECR2Q9BXF3 1484 aa35.16■■■■□ 3.22
CYTH3-211ENST00000495176 SMARCA4P51532 1647 aa34.47■■■■□ 3.11
CYTH3-211ENST00000495176 NCAPD3P42695 1498 aa34.39■■■■□ 3.1
CYTH3-211ENST00000495176 BAZ1AQ9NRL2 1556 aaPredicted RBP34.38■■■■□ 3.09
CYTH3-211ENST00000495176 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
CYTH3-211ENST00000495176 SMARCA2P51531 1590 aa34.34■■■■□ 3.09
CYTH3-211ENST00000495176 HMGXB3Q12766 1538 aa34.19■■■■□ 3.06
CYTH3-211ENST00000495176 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
CYTH3-211ENST00000495176 BAZ1BQ9UIG0 1483 aaKnown RBP34.09■■■■□ 3.05
CYTH3-211ENST00000495176 PEG3Q9GZU2 1588 aa34.09■■■■□ 3.05
CYTH3-211ENST00000495176 WIZO95785 1651 aa33.79■■■■□ 3
CYTH3-211ENST00000495176 ERCC6Q03468 1493 aa33.77■■■■□ 3
CYTH3-211ENST00000495176 NESP48681 1621 aa33.75■■■□□ 2.99
CYTH3-211ENST00000495176 RSF1Q96T23 1441 aaPredicted RBP33.63■■■□□ 2.97
CYTH3-211ENST00000495176 LAMC3Q9Y6N6 1575 aa33.59■■■□□ 2.97
CYTH3-211ENST00000495176 CUX2O14529 1486 aa33.5■■■□□ 2.95
CYTH3-211ENST00000495176 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
CYTH3-211ENST00000495176 CADPSQ9ULU8 1353 aa33.39■■■□□ 2.94
CYTH3-211ENST00000495176 TOP2AP11388 1531 aaKnown RBP33.36■■■□□ 2.93
CYTH3-211ENST00000495176 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
CYTH3-211ENST00000495176 THOC2Q8NI27 1593 aaKnown RBP33.25■■■□□ 2.91
CYTH3-211ENST00000495176 CFTRP13569 1480 aa33.09■■■□□ 2.89
CYTH3-211ENST00000495176 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
CYTH3-211ENST00000495176 CEP164Q9UPV0 1460 aa33.02■■■□□ 2.88
CYTH3-211ENST00000495176 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
CYTH3-211ENST00000495176 FANCD2Q9BXW9 1451 aa33.01■■■□□ 2.88
CYTH3-211ENST00000495176 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
CYTH3-211ENST00000495176 PRDM2Q13029 1718 aa32.93■■■□□ 2.86
CYTH3-211ENST00000495176 WDR62O43379 1518 aa32.91■■■□□ 2.86
CYTH3-211ENST00000495176 SUPT5HO00267 1087 aaKnown RBP32.79■■■□□ 2.84
CYTH3-211ENST00000495176 URB2Q14146 1524 aaKnown RBP32.68■■■□□ 2.82
CYTH3-211ENST00000495176 ABCC8Q09428 1581 aa32.46■■■□□ 2.79
CYTH3-211ENST00000495176 TOPBP1Q92547 1522 aa32.43■■■□□ 2.78
CYTH3-211ENST00000495176 DNMBPQ6XZF7 1577 aa32.37■■■□□ 2.77
CYTH3-211ENST00000495176 IFT140Q96RY7 1462 aa32.34■■■□□ 2.77
CYTH3-211ENST00000495176 ZNF608Q9ULD9 1512 aaPredicted RBP32.25■■■□□ 2.75
CYTH3-211ENST00000495176 OSCARQ8IYS5 282 aa32.13■■■□□ 2.73
CYTH3-211ENST00000495176 POLA1P09884 1462 aaPredicted RBP32.12■■■□□ 2.73
CYTH3-211ENST00000495176 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
CYTH3-211ENST00000495176 RAD54L2Q9Y4B4 1467 aa32.08■■■□□ 2.73
CYTH3-211ENST00000495176 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
CYTH3-211ENST00000495176 AQRO60306 1485 aaKnown RBP eCLIP32.07■■■□□ 2.72
CYTH3-211ENST00000495176 SOGA1O94964 1423 aa32.06■■■□□ 2.72
CYTH3-211ENST00000495176 CUX1P39880 1505 aa32.03■■■□□ 2.72
CYTH3-211ENST00000495176 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.71
CYTH3-211ENST00000495176 TDRD9Q8NDG6 1382 aaKnown RBP31.98■■■□□ 2.71
CYTH3-211ENST00000495176 FBLN2P98095 1184 aa31.92■■■□□ 2.7
CYTH3-211ENST00000495176 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
CYTH3-211ENST00000495176 WDR97A6NE52 1622 aa31.85■■■□□ 2.69
CYTH3-211ENST00000495176 CHD1O14646 1710 aa31.81■■■□□ 2.68
CYTH3-211ENST00000495176 WRNQ14191 1432 aaPredicted RBP eCLIP31.74■■■□□ 2.67
CYTH3-211ENST00000495176 SNAPC4Q5SXM2 1469 aa31.7■■■□□ 2.66
CYTH3-211ENST00000495176 TOP2BQ02880 1626 aa31.69■■■□□ 2.66
CYTH3-211ENST00000495176 BIVM-ERCC5R4GMW8 1640 aa31.69■■■□□ 2.66
CYTH3-211ENST00000495176 GRIN2BQ13224 1484 aa31.68■■■□□ 2.66
CYTH3-211ENST00000495176 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
CYTH3-211ENST00000495176 ABCA10Q8WWZ4 1543 aa31.65■■■□□ 2.66
CYTH3-211ENST00000495176 GAPVD1Q14C86 1478 aa31.65■■■□□ 2.66
CYTH3-211ENST00000495176 PBRM1Q86U86 1689 aa31.64■■■□□ 2.66
CYTH3-211ENST00000495176 MAGI1Q96QZ7 1491 aaPredicted RBP31.64■■■□□ 2.66
CYTH3-211ENST00000495176 SYNJ1O43426 1573 aa31.64■■■□□ 2.65
CYTH3-211ENST00000495176 RIMBP3CA6NJZ7 1639 aa31.6■■■□□ 2.65
CYTH3-211ENST00000495176 RIMBP3BA6NNM3 1639 aa31.6■■■□□ 2.65
CYTH3-211ENST00000495176 RIMBP3Q9UFD9 1639 aa31.6■■■□□ 2.65
CYTH3-211ENST00000495176 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
CYTH3-211ENST00000495176 ARHGEF11O15085 1522 aa31.52■■■□□ 2.64
CYTH3-211ENST00000495176 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
CYTH3-211ENST00000495176 CYB5RLQ6IPT4 315 aa31.43■■■□□ 2.62
CYTH3-211ENST00000495176 CLASP1Q7Z460 1538 aa31.35■■■□□ 2.61
CYTH3-211ENST00000495176 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
CYTH3-211ENST00000495176 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
CYTH3-211ENST00000495176 GRIN2AQ12879 1464 aa31.26■■■□□ 2.59
CYTH3-211ENST00000495176 FHAD1B1AJZ9 1412 aa31.25■■■□□ 2.59
CYTH3-211ENST00000495176 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
CYTH3-211ENST00000495176 CEP170Q5SW79 1584 aa31.11■■■□□ 2.57
CYTH3-211ENST00000495176 KIF27Q86VH2 1401 aa31.11■■■□□ 2.57
CYTH3-211ENST00000495176 NUP160Q12769 1436 aa31.1■■■□□ 2.57
CYTH3-211ENST00000495176 IGF1RP08069 1367 aa31.05■■■□□ 2.56
CYTH3-211ENST00000495176 CUL7Q14999 1698 aa30.98■■■□□ 2.55
CYTH3-211ENST00000495176 TRHP20396 242 aaPredicted RBP30.98■■■□□ 2.55
CYTH3-211ENST00000495176 ERCC6L2Q5T890 1561 aa30.94■■■□□ 2.54
CYTH3-211ENST00000495176 SHROOM2Q13796 1616 aa30.94■■■□□ 2.54
CYTH3-211ENST00000495176 JPH4Q96JJ6 628 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms