RNA–Protein interactions for RNA: ENST00000494975.1

PRUNE2-215, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-215ENST00000494975 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
PRUNE2-215ENST00000494975 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
PRUNE2-215ENST00000494975 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
PRUNE2-215ENST00000494975 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
PRUNE2-215ENST00000494975 ABCC9O60706 1549 aa16.06■□□□□ 0.16
PRUNE2-215ENST00000494975 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
PRUNE2-215ENST00000494975 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
PRUNE2-215ENST00000494975 RB1CC1Q8TDY2 1594 aa15.37■□□□□ 0.05
PRUNE2-215ENST00000494975 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
PRUNE2-215ENST00000494975 NACADO15069 1562 aa15.31■□□□□ 0.04
PRUNE2-215ENST00000494975 ZCCHC6Q5VYS8 1495 aaKnown RBP15.16■□□□□ 0.02
PRUNE2-215ENST00000494975 MYO15BQ96JP2 1530 aa15.14■□□□□ 0.01
PRUNE2-215ENST00000494975 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
PRUNE2-215ENST00000494975 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
PRUNE2-215ENST00000494975 UNC13AQ9UPW8 1703 aa14.99□□□□□ -0.01
PRUNE2-215ENST00000494975 SCRIBQ14160 1630 aa14.88□□□□□ -0.03
PRUNE2-215ENST00000494975 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
PRUNE2-215ENST00000494975 FOXD1Q16676 465 aa14.82□□□□□ -0.04
PRUNE2-215ENST00000494975 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
PRUNE2-215ENST00000494975 SHROOM4Q9ULL8 1493 aa14.72□□□□□ -0.05
PRUNE2-215ENST00000494975 PLPPR3Q6T4P5 718 aa14.57□□□□□ -0.08
PRUNE2-215ENST00000494975 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
PRUNE2-215ENST00000494975 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
PRUNE2-215ENST00000494975 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
PRUNE2-215ENST00000494975 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
PRUNE2-215ENST00000494975 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
PRUNE2-215ENST00000494975 ATAD2BQ9ULI0 1458 aa14.12□□□□□ -0.15
PRUNE2-215ENST00000494975 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
PRUNE2-215ENST00000494975 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
PRUNE2-215ENST00000494975 PPP6R1Q9UPN7 881 aa14.07□□□□□ -0.16
PRUNE2-215ENST00000494975 ADRA2BP18089 450 aa14.05□□□□□ -0.16
PRUNE2-215ENST00000494975 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
PRUNE2-215ENST00000494975 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
PRUNE2-215ENST00000494975 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
PRUNE2-215ENST00000494975 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
PRUNE2-215ENST00000494975 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
PRUNE2-215ENST00000494975 WIZO95785 1651 aa13.89□□□□□ -0.19
PRUNE2-215ENST00000494975 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
PRUNE2-215ENST00000494975 NESP48681 1621 aa13.85□□□□□ -0.19
PRUNE2-215ENST00000494975 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
PRUNE2-215ENST00000494975 MSH5O43196 834 aa13.78□□□□□ -0.2
PRUNE2-215ENST00000494975 LAMC3Q9Y6N6 1575 aa13.78□□□□□ -0.2
PRUNE2-215ENST00000494975 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
PRUNE2-215ENST00000494975 CUX2O14529 1486 aa13.72□□□□□ -0.21
PRUNE2-215ENST00000494975 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
PRUNE2-215ENST00000494975 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.22
PRUNE2-215ENST00000494975 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
PRUNE2-215ENST00000494975 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
PRUNE2-215ENST00000494975 CFTRP13569 1480 aa13.6□□□□□ -0.23
PRUNE2-215ENST00000494975 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
PRUNE2-215ENST00000494975 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
PRUNE2-215ENST00000494975 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
PRUNE2-215ENST00000494975 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
PRUNE2-215ENST00000494975 WDR62O43379 1518 aa13.52□□□□□ -0.25
PRUNE2-215ENST00000494975 PRDM2Q13029 1718 aa13.49□□□□□ -0.25
PRUNE2-215ENST00000494975 SUPT5HO00267 1087 aaKnown RBP13.47□□□□□ -0.25
PRUNE2-215ENST00000494975 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
PRUNE2-215ENST00000494975 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
PRUNE2-215ENST00000494975 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
PRUNE2-215ENST00000494975 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
PRUNE2-215ENST00000494975 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
PRUNE2-215ENST00000494975 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
PRUNE2-215ENST00000494975 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
PRUNE2-215ENST00000494975 POLA1P09884 1462 aaPredicted RBP13.22□□□□□ -0.29
PRUNE2-215ENST00000494975 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
PRUNE2-215ENST00000494975 CUX1P39880 1505 aa13.19□□□□□ -0.3
PRUNE2-215ENST00000494975 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
PRUNE2-215ENST00000494975 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
PRUNE2-215ENST00000494975 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
PRUNE2-215ENST00000494975 SOGA1O94964 1423 aa13.16□□□□□ -0.3
PRUNE2-215ENST00000494975 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.3
PRUNE2-215ENST00000494975 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
PRUNE2-215ENST00000494975 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
PRUNE2-215ENST00000494975 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
PRUNE2-215ENST00000494975 WDR97A6NE52 1622 aa13.07□□□□□ -0.32
PRUNE2-215ENST00000494975 FBLN2P98095 1184 aa13.07□□□□□ -0.32
PRUNE2-215ENST00000494975 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
PRUNE2-215ENST00000494975 CHD1O14646 1710 aa13.05□□□□□ -0.32
PRUNE2-215ENST00000494975 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
PRUNE2-215ENST00000494975 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
PRUNE2-215ENST00000494975 BIVM-ERCC5R4GMW8 1640 aa13.03□□□□□ -0.32
PRUNE2-215ENST00000494975 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
PRUNE2-215ENST00000494975 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
PRUNE2-215ENST00000494975 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
PRUNE2-215ENST00000494975 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
PRUNE2-215ENST00000494975 TRIM41Q8WV44 630 aa13□□□□□ -0.33
PRUNE2-215ENST00000494975 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
PRUNE2-215ENST00000494975 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
PRUNE2-215ENST00000494975 CHMP7Q8WUX9 453 aaPredicted RBP12.98□□□□□ -0.33
PRUNE2-215ENST00000494975 SYNJ2O15056 1496 aa12.96□□□□□ -0.34
PRUNE2-215ENST00000494975 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
PRUNE2-215ENST00000494975 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
PRUNE2-215ENST00000494975 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
PRUNE2-215ENST00000494975 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
PRUNE2-215ENST00000494975 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
PRUNE2-215ENST00000494975 ADAMTS12P58397 1594 aa12.9□□□□□ -0.35
PRUNE2-215ENST00000494975 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
PRUNE2-215ENST00000494975 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
PRUNE2-215ENST00000494975 GRIN2AQ12879 1464 aa12.86□□□□□ -0.35
PRUNE2-215ENST00000494975 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms