RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 NISCHQ9Y2I1 1504 aa34.99■■■■□ 3.19
SCAP-213ENST00000494938 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
SCAP-213ENST00000494938 ABCC9O60706 1549 aa30.56■■■□□ 2.48
SCAP-213ENST00000494938 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
SCAP-213ENST00000494938 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
SCAP-213ENST00000494938 NACADO15069 1562 aa29.23■■■□□ 2.27
SCAP-213ENST00000494938 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
SCAP-213ENST00000494938 MYO15BQ96JP2 1530 aa29.06■■■□□ 2.24
SCAP-213ENST00000494938 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
SCAP-213ENST00000494938 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
SCAP-213ENST00000494938 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
SCAP-213ENST00000494938 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
SCAP-213ENST00000494938 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
SCAP-213ENST00000494938 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
SCAP-213ENST00000494938 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
SCAP-213ENST00000494938 EIF4G1Q04637 1599 aaKnown RBP27.66■■■□□ 2.02
SCAP-213ENST00000494938 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
SCAP-213ENST00000494938 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
SCAP-213ENST00000494938 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
SCAP-213ENST00000494938 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
SCAP-213ENST00000494938 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
SCAP-213ENST00000494938 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
SCAP-213ENST00000494938 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
SCAP-213ENST00000494938 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
SCAP-213ENST00000494938 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
SCAP-213ENST00000494938 HMGXB3Q12766 1538 aa26.81■■□□□ 1.88
SCAP-213ENST00000494938 BAZ1BQ9UIG0 1483 aaKnown RBP26.77■■□□□ 1.88
SCAP-213ENST00000494938 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
SCAP-213ENST00000494938 WIZO95785 1651 aa26.6■■□□□ 1.85
SCAP-213ENST00000494938 NESP48681 1621 aa26.43■■□□□ 1.82
SCAP-213ENST00000494938 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
SCAP-213ENST00000494938 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
SCAP-213ENST00000494938 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
SCAP-213ENST00000494938 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
SCAP-213ENST00000494938 PDS5BQ9NTI5 1447 aa26.17■■□□□ 1.78
SCAP-213ENST00000494938 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
SCAP-213ENST00000494938 CFTRP13569 1480 aa26.1■■□□□ 1.77
SCAP-213ENST00000494938 CUX2O14529 1486 aa26.04■■□□□ 1.76
SCAP-213ENST00000494938 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
SCAP-213ENST00000494938 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
SCAP-213ENST00000494938 KIF21AQ7Z4S6 1674 aa25.93■■□□□ 1.74
SCAP-213ENST00000494938 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
SCAP-213ENST00000494938 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
SCAP-213ENST00000494938 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
SCAP-213ENST00000494938 WDR62O43379 1518 aa25.75■■□□□ 1.71
SCAP-213ENST00000494938 URB2Q14146 1524 aaKnown RBP25.69■■□□□ 1.7
SCAP-213ENST00000494938 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
SCAP-213ENST00000494938 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
SCAP-213ENST00000494938 TOPBP1Q92547 1522 aa25.5■■□□□ 1.67
SCAP-213ENST00000494938 ABCC8Q09428 1581 aa25.48■■□□□ 1.67
SCAP-213ENST00000494938 DNMBPQ6XZF7 1577 aa25.41■■□□□ 1.66
SCAP-213ENST00000494938 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
SCAP-213ENST00000494938 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
SCAP-213ENST00000494938 CUX1P39880 1505 aa25.3■■□□□ 1.64
SCAP-213ENST00000494938 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
SCAP-213ENST00000494938 SOGA1O94964 1423 aa25.25■■□□□ 1.63
SCAP-213ENST00000494938 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
SCAP-213ENST00000494938 FGD5Q6ZNL6 1462 aa25.21■■□□□ 1.63
SCAP-213ENST00000494938 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
SCAP-213ENST00000494938 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.626e-10■■■■□ 19.9
SCAP-213ENST00000494938 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
SCAP-213ENST00000494938 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
SCAP-213ENST00000494938 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
SCAP-213ENST00000494938 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
SCAP-213ENST00000494938 SYNJ1O43426 1573 aa25■■□□□ 1.59
SCAP-213ENST00000494938 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
SCAP-213ENST00000494938 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
SCAP-213ENST00000494938 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
SCAP-213ENST00000494938 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
SCAP-213ENST00000494938 FBLN2P98095 1184 aa24.91■■□□□ 1.58
SCAP-213ENST00000494938 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
SCAP-213ENST00000494938 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
SCAP-213ENST00000494938 SNAPC4Q5SXM2 1469 aa24.87■■□□□ 1.57
SCAP-213ENST00000494938 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
SCAP-213ENST00000494938 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
SCAP-213ENST00000494938 ABCA5Q8WWZ7 1642 aa24.79■■□□□ 1.56
SCAP-213ENST00000494938 SYNJ2O15056 1496 aa24.74■■□□□ 1.55
SCAP-213ENST00000494938 CHD1O14646 1710 aa24.69■■□□□ 1.54
SCAP-213ENST00000494938 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
SCAP-213ENST00000494938 ERICH3Q5RHP9 1530 aa24.63■■□□□ 1.53
SCAP-213ENST00000494938 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
SCAP-213ENST00000494938 IGF1RP08069 1367 aa24.62■■□□□ 1.53
SCAP-213ENST00000494938 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
SCAP-213ENST00000494938 KIF27Q86VH2 1401 aa24.6■■□□□ 1.53
SCAP-213ENST00000494938 GRIN2AQ12879 1464 aa24.57■■□□□ 1.52
SCAP-213ENST00000494938 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
SCAP-213ENST00000494938 ADAMTS12P58397 1594 aa24.55■■□□□ 1.52
SCAP-213ENST00000494938 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
SCAP-213ENST00000494938 RIMBP3CA6NJZ7 1639 aa24.52■■□□□ 1.52
SCAP-213ENST00000494938 RIMBP3BA6NNM3 1639 aa24.52■■□□□ 1.52
SCAP-213ENST00000494938 RIMBP3Q9UFD9 1639 aa24.52■■□□□ 1.52
SCAP-213ENST00000494938 NUP160Q12769 1436 aa24.5■■□□□ 1.51
SCAP-213ENST00000494938 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
SCAP-213ENST00000494938 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
SCAP-213ENST00000494938 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
SCAP-213ENST00000494938 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
SCAP-213ENST00000494938 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SCAP-213ENST00000494938 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
SCAP-213ENST00000494938 CUL7Q14999 1698 aa24.29■■□□□ 1.48
SCAP-213ENST00000494938 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms