RNA–Protein interactions for RNA: ENST00000494926.5

TM2D1-210, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-210ENST00000494926 NISCHQ9Y2I1 1504 aa28.72■■■□□ 2.19
TM2D1-210ENST00000494926 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
TM2D1-210ENST00000494926 ABCC9O60706 1549 aa25.63■■□□□ 1.69
TM2D1-210ENST00000494926 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
TM2D1-210ENST00000494926 NACADO15069 1562 aa24.22■■□□□ 1.47
TM2D1-210ENST00000494926 DCAF8L2P0C7V8 631 aa24.22■■□□□ 1.47
TM2D1-210ENST00000494926 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
TM2D1-210ENST00000494926 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
TM2D1-210ENST00000494926 MYO15BQ96JP2 1530 aa23.85■■□□□ 1.41
TM2D1-210ENST00000494926 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
TM2D1-210ENST00000494926 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
TM2D1-210ENST00000494926 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
TM2D1-210ENST00000494926 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.38
TM2D1-210ENST00000494926 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
TM2D1-210ENST00000494926 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
TM2D1-210ENST00000494926 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
TM2D1-210ENST00000494926 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
TM2D1-210ENST00000494926 CECR2Q9BXF3 1484 aa23.01■■□□□ 1.27
TM2D1-210ENST00000494926 SMARCA4P51532 1647 aa22.43■■□□□ 1.18
TM2D1-210ENST00000494926 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
TM2D1-210ENST00000494926 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
TM2D1-210ENST00000494926 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
TM2D1-210ENST00000494926 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
TM2D1-210ENST00000494926 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
TM2D1-210ENST00000494926 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
TM2D1-210ENST00000494926 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
TM2D1-210ENST00000494926 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
TM2D1-210ENST00000494926 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
TM2D1-210ENST00000494926 NESP48681 1621 aa22.07■■□□□ 1.12
TM2D1-210ENST00000494926 WIZO95785 1651 aa21.99■■□□□ 1.11
TM2D1-210ENST00000494926 CUX2O14529 1486 aa21.9■■□□□ 1.1
TM2D1-210ENST00000494926 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
TM2D1-210ENST00000494926 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
TM2D1-210ENST00000494926 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
TM2D1-210ENST00000494926 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
TM2D1-210ENST00000494926 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
TM2D1-210ENST00000494926 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
TM2D1-210ENST00000494926 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
TM2D1-210ENST00000494926 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
TM2D1-210ENST00000494926 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
TM2D1-210ENST00000494926 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
TM2D1-210ENST00000494926 WDR62O43379 1518 aa21.5■■□□□ 1.03
TM2D1-210ENST00000494926 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
TM2D1-210ENST00000494926 CFTRP13569 1480 aa21.47■■□□□ 1.03
TM2D1-210ENST00000494926 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
TM2D1-210ENST00000494926 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
TM2D1-210ENST00000494926 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
TM2D1-210ENST00000494926 TOPBP1Q92547 1522 aa21.12■□□□□ 0.97
TM2D1-210ENST00000494926 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
TM2D1-210ENST00000494926 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
TM2D1-210ENST00000494926 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
TM2D1-210ENST00000494926 EIF4G3O43432 1585 aaKnown RBP20.99■□□□□ 0.95
TM2D1-210ENST00000494926 SUPT5HO00267 1087 aaKnown RBP20.98■□□□□ 0.95
TM2D1-210ENST00000494926 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
TM2D1-210ENST00000494926 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
TM2D1-210ENST00000494926 TRIM41Q8WV44 630 aa20.93■□□□□ 0.94
TM2D1-210ENST00000494926 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
TM2D1-210ENST00000494926 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
TM2D1-210ENST00000494926 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
TM2D1-210ENST00000494926 AQRO60306 1485 aaKnown RBP eCLIP20.86■□□□□ 0.93
TM2D1-210ENST00000494926 CHD1O14646 1710 aa20.85■□□□□ 0.93
TM2D1-210ENST00000494926 CUX1P39880 1505 aa20.84■□□□□ 0.93
TM2D1-210ENST00000494926 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
TM2D1-210ENST00000494926 SOGA1O94964 1423 aa20.77■□□□□ 0.91
TM2D1-210ENST00000494926 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
TM2D1-210ENST00000494926 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
TM2D1-210ENST00000494926 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
TM2D1-210ENST00000494926 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
TM2D1-210ENST00000494926 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
TM2D1-210ENST00000494926 FBLN2P98095 1184 aa20.7■□□□□ 0.9
TM2D1-210ENST00000494926 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
TM2D1-210ENST00000494926 ARHGEF11O15085 1522 aa20.67■□□□□ 0.9
TM2D1-210ENST00000494926 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
TM2D1-210ENST00000494926 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
TM2D1-210ENST00000494926 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
TM2D1-210ENST00000494926 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
TM2D1-210ENST00000494926 BIVM-ERCC5R4GMW8 1640 aa20.56■□□□□ 0.88
TM2D1-210ENST00000494926 MAGI1Q96QZ7 1491 aaPredicted RBP20.56■□□□□ 0.88
TM2D1-210ENST00000494926 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
TM2D1-210ENST00000494926 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
TM2D1-210ENST00000494926 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
TM2D1-210ENST00000494926 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.87
TM2D1-210ENST00000494926 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
TM2D1-210ENST00000494926 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
TM2D1-210ENST00000494926 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
TM2D1-210ENST00000494926 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
TM2D1-210ENST00000494926 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
TM2D1-210ENST00000494926 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
TM2D1-210ENST00000494926 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
TM2D1-210ENST00000494926 CEP170Q5SW79 1584 aa20.33■□□□□ 0.84
TM2D1-210ENST00000494926 ERICH3Q5RHP9 1530 aa20.28■□□□□ 0.84
TM2D1-210ENST00000494926 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
TM2D1-210ENST00000494926 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.83
TM2D1-210ENST00000494926 NUP160Q12769 1436 aa20.23■□□□□ 0.83
TM2D1-210ENST00000494926 TRHP20396 242 aaPredicted RBP20.21■□□□□ 0.83
TM2D1-210ENST00000494926 SHROOM2Q13796 1616 aa20.18■□□□□ 0.82
TM2D1-210ENST00000494926 RUSC2Q8N2Y8 1516 aa20.14■□□□□ 0.81
TM2D1-210ENST00000494926 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
TM2D1-210ENST00000494926 CUL7Q14999 1698 aa20.08■□□□□ 0.81
TM2D1-210ENST00000494926 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms