RNA–Protein interactions for RNA: ENST00000494852.1

COL4A2-209, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-209ENST00000494852 NISCHQ9Y2I1 1504 aa40.3■■■■■ 4.04
COL4A2-209ENST00000494852 ABCC9O60706 1549 aa36.59■■■■□ 3.45
COL4A2-209ENST00000494852 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
COL4A2-209ENST00000494852 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
COL4A2-209ENST00000494852 DNAJC5BQ9UF47 199 aa34.67■■■■□ 3.14
COL4A2-209ENST00000494852 NACADO15069 1562 aa34.43■■■■□ 3.1
COL4A2-209ENST00000494852 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
COL4A2-209ENST00000494852 PABPN1Q86U42 306 aaKnown RBP eCLIP34.02■■■■□ 3.04
COL4A2-209ENST00000494852 MYO15BQ96JP2 1530 aa33.89■■■■□ 3.02
COL4A2-209ENST00000494852 UNC13AQ9UPW8 1703 aa33.88■■■■□ 3.01
COL4A2-209ENST00000494852 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
COL4A2-209ENST00000494852 ZCCHC6Q5VYS8 1495 aaKnown RBP33.31■■■□□ 2.92
COL4A2-209ENST00000494852 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
COL4A2-209ENST00000494852 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
COL4A2-209ENST00000494852 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
COL4A2-209ENST00000494852 CECR2Q9BXF3 1484 aa33.04■■■□□ 2.88
COL4A2-209ENST00000494852 SCRIBQ14160 1630 aa33■■■□□ 2.87
COL4A2-209ENST00000494852 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
COL4A2-209ENST00000494852 DNAJC5Q9H3Z4 198 aa32.14■■■□□ 2.74
COL4A2-209ENST00000494852 NCAPD3P42695 1498 aa31.81■■■□□ 2.68
COL4A2-209ENST00000494852 CUX2O14529 1486 aa31.75■■■□□ 2.67
COL4A2-209ENST00000494852 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
COL4A2-209ENST00000494852 ATAD2BQ9ULI0 1458 aa31.63■■■□□ 2.65
COL4A2-209ENST00000494852 SMARCA2P51531 1590 aa31.52■■■□□ 2.64
COL4A2-209ENST00000494852 HMGXB3Q12766 1538 aa31.51■■■□□ 2.63
COL4A2-209ENST00000494852 SMARCA4P51532 1647 aa31.48■■■□□ 2.63
COL4A2-209ENST00000494852 NESP48681 1621 aa31.34■■■□□ 2.61
COL4A2-209ENST00000494852 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
COL4A2-209ENST00000494852 BAZ1BQ9UIG0 1483 aaKnown RBP31.28■■■□□ 2.6
COL4A2-209ENST00000494852 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
COL4A2-209ENST00000494852 LAMC3Q9Y6N6 1575 aa31.11■■■□□ 2.57
COL4A2-209ENST00000494852 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
COL4A2-209ENST00000494852 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
COL4A2-209ENST00000494852 PDS5BQ9NTI5 1447 aa30.96■■■□□ 2.55
COL4A2-209ENST00000494852 KIF21AQ7Z4S6 1674 aa30.9■■■□□ 2.54
COL4A2-209ENST00000494852 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
COL4A2-209ENST00000494852 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
COL4A2-209ENST00000494852 WDR62O43379 1518 aa30.63■■■□□ 2.49
COL4A2-209ENST00000494852 WIZO95785 1651 aa30.61■■■□□ 2.49
COL4A2-209ENST00000494852 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
COL4A2-209ENST00000494852 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
COL4A2-209ENST00000494852 FANCD2Q9BXW9 1451 aa30.43■■■□□ 2.46
COL4A2-209ENST00000494852 CFTRP13569 1480 aa30.38■■■□□ 2.45
COL4A2-209ENST00000494852 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
COL4A2-209ENST00000494852 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
COL4A2-209ENST00000494852 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
COL4A2-209ENST00000494852 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
COL4A2-209ENST00000494852 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
COL4A2-209ENST00000494852 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
COL4A2-209ENST00000494852 CCDC88BA6NC98 1476 aa29.9■■■□□ 2.38
COL4A2-209ENST00000494852 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
COL4A2-209ENST00000494852 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
COL4A2-209ENST00000494852 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
COL4A2-209ENST00000494852 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
COL4A2-209ENST00000494852 TOPBP1Q92547 1522 aa29.81■■■□□ 2.36
COL4A2-209ENST00000494852 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
COL4A2-209ENST00000494852 ARHGEF11O15085 1522 aa29.72■■■□□ 2.35
COL4A2-209ENST00000494852 EIF4G3O43432 1585 aaKnown RBP29.68■■■□□ 2.34
COL4A2-209ENST00000494852 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
COL4A2-209ENST00000494852 TARBP1Q13395 1621 aaKnown RBP29.57■■■□□ 2.32
COL4A2-209ENST00000494852 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.32
COL4A2-209ENST00000494852 CYB5RLQ6IPT4 315 aa29.53■■■□□ 2.32
COL4A2-209ENST00000494852 CHD1O14646 1710 aa29.5■■■□□ 2.31
COL4A2-209ENST00000494852 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
COL4A2-209ENST00000494852 FBLN2P98095 1184 aa29.42■■■□□ 2.3
COL4A2-209ENST00000494852 ARAP1Q96P48 1450 aa29.4■■■□□ 2.3
COL4A2-209ENST00000494852 SOGA1O94964 1423 aa29.37■■■□□ 2.29
COL4A2-209ENST00000494852 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
COL4A2-209ENST00000494852 TDRD9Q8NDG6 1382 aaKnown RBP29.33■■■□□ 2.29
COL4A2-209ENST00000494852 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
COL4A2-209ENST00000494852 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
COL4A2-209ENST00000494852 SNAPC4Q5SXM2 1469 aa29.24■■■□□ 2.27
COL4A2-209ENST00000494852 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
COL4A2-209ENST00000494852 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.27
COL4A2-209ENST00000494852 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
COL4A2-209ENST00000494852 CHMP7Q8WUX9 453 aaPredicted RBP29.19■■■□□ 2.26
COL4A2-209ENST00000494852 CUX1P39880 1505 aa29.16■■■□□ 2.26
COL4A2-209ENST00000494852 SYNJ1O43426 1573 aa29.15■■■□□ 2.26
COL4A2-209ENST00000494852 GRIN2BQ13224 1484 aa29.15■■■□□ 2.26
COL4A2-209ENST00000494852 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
COL4A2-209ENST00000494852 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
COL4A2-209ENST00000494852 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
COL4A2-209ENST00000494852 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
COL4A2-209ENST00000494852 ABCA5Q8WWZ7 1642 aa28.88■■■□□ 2.21
COL4A2-209ENST00000494852 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
COL4A2-209ENST00000494852 WRNQ14191 1432 aaPredicted RBP eCLIP28.74■■■□□ 2.19
COL4A2-209ENST00000494852 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
COL4A2-209ENST00000494852 NUP160Q12769 1436 aa28.69■■■□□ 2.18
COL4A2-209ENST00000494852 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
COL4A2-209ENST00000494852 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
COL4A2-209ENST00000494852 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
COL4A2-209ENST00000494852 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
COL4A2-209ENST00000494852 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
COL4A2-209ENST00000494852 TOP2BQ02880 1626 aa28.61■■■□□ 2.17
COL4A2-209ENST00000494852 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
COL4A2-209ENST00000494852 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
COL4A2-209ENST00000494852 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
COL4A2-209ENST00000494852 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
COL4A2-209ENST00000494852 JPH4Q96JJ6 628 aa28.41■■■□□ 2.14
COL4A2-209ENST00000494852 KIF13AQ9H1H9 1805 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms