RNA–Protein interactions for RNA: ENST00000494851.5

TNFSF10-206, Transcript of TNF superfamily member 10, humanhuman

TSL 2

Gene TNFSF10, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-206ENST00000494851 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
TNFSF10-206ENST00000494851 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
TNFSF10-206ENST00000494851 ABCC9O60706 1549 aa25.93■■□□□ 1.74
TNFSF10-206ENST00000494851 DCAF8L2P0C7V8 631 aa24.91■■□□□ 1.58
TNFSF10-206ENST00000494851 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.58
TNFSF10-206ENST00000494851 NACADO15069 1562 aa24.84■■□□□ 1.57
TNFSF10-206ENST00000494851 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
TNFSF10-206ENST00000494851 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
TNFSF10-206ENST00000494851 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
TNFSF10-206ENST00000494851 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
TNFSF10-206ENST00000494851 PABPN1Q86U42 306 aaKnown RBP eCLIP24.25■■□□□ 1.47
TNFSF10-206ENST00000494851 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
TNFSF10-206ENST00000494851 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
TNFSF10-206ENST00000494851 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
TNFSF10-206ENST00000494851 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
TNFSF10-206ENST00000494851 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
TNFSF10-206ENST00000494851 CC2D2AQ9P2K1 1620 aa23.43■■□□□ 1.34
TNFSF10-206ENST00000494851 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
TNFSF10-206ENST00000494851 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
TNFSF10-206ENST00000494851 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
TNFSF10-206ENST00000494851 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
TNFSF10-206ENST00000494851 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
TNFSF10-206ENST00000494851 SMARCA2P51531 1590 aa22.89■■□□□ 1.26
TNFSF10-206ENST00000494851 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
TNFSF10-206ENST00000494851 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
TNFSF10-206ENST00000494851 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
TNFSF10-206ENST00000494851 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
TNFSF10-206ENST00000494851 WIZO95785 1651 aa22.61■■□□□ 1.21
TNFSF10-206ENST00000494851 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
TNFSF10-206ENST00000494851 NESP48681 1621 aa22.41■■□□□ 1.18
TNFSF10-206ENST00000494851 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
TNFSF10-206ENST00000494851 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
TNFSF10-206ENST00000494851 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.16
TNFSF10-206ENST00000494851 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
TNFSF10-206ENST00000494851 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
TNFSF10-206ENST00000494851 CUX2O14529 1486 aa22.13■■□□□ 1.13
TNFSF10-206ENST00000494851 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
TNFSF10-206ENST00000494851 CFTRP13569 1480 aa22.11■■□□□ 1.13
TNFSF10-206ENST00000494851 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
TNFSF10-206ENST00000494851 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
TNFSF10-206ENST00000494851 SUPT5HO00267 1087 aaKnown RBP22.02■■□□□ 1.12
TNFSF10-206ENST00000494851 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
TNFSF10-206ENST00000494851 CEP164Q9UPV0 1460 aa21.98■■□□□ 1.11
TNFSF10-206ENST00000494851 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
TNFSF10-206ENST00000494851 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
TNFSF10-206ENST00000494851 WDR62O43379 1518 aa21.87■■□□□ 1.09
TNFSF10-206ENST00000494851 URB2Q14146 1524 aaKnown RBP21.78■■□□□ 1.08
TNFSF10-206ENST00000494851 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
TNFSF10-206ENST00000494851 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
TNFSF10-206ENST00000494851 DNMBPQ6XZF7 1577 aa21.61■■□□□ 1.05
TNFSF10-206ENST00000494851 DNAJC5Q9H3Z4 198 aa21.58■■□□□ 1.05
TNFSF10-206ENST00000494851 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
TNFSF10-206ENST00000494851 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.03
TNFSF10-206ENST00000494851 CUX1P39880 1505 aa21.45■■□□□ 1.02
TNFSF10-206ENST00000494851 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
TNFSF10-206ENST00000494851 SOGA1O94964 1423 aa21.4■■□□□ 1.02
TNFSF10-206ENST00000494851 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
TNFSF10-206ENST00000494851 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
TNFSF10-206ENST00000494851 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
TNFSF10-206ENST00000494851 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
TNFSF10-206ENST00000494851 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
TNFSF10-206ENST00000494851 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
TNFSF10-206ENST00000494851 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
TNFSF10-206ENST00000494851 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
TNFSF10-206ENST00000494851 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
TNFSF10-206ENST00000494851 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
TNFSF10-206ENST00000494851 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
TNFSF10-206ENST00000494851 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
TNFSF10-206ENST00000494851 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
TNFSF10-206ENST00000494851 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
TNFSF10-206ENST00000494851 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
TNFSF10-206ENST00000494851 FBLN2P98095 1184 aa21.13■□□□□ 0.97
TNFSF10-206ENST00000494851 SNAPC4Q5SXM2 1469 aa21.11■□□□□ 0.97
TNFSF10-206ENST00000494851 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
TNFSF10-206ENST00000494851 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
TNFSF10-206ENST00000494851 CHD1O14646 1710 aa21.07■□□□□ 0.96
TNFSF10-206ENST00000494851 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
TNFSF10-206ENST00000494851 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
TNFSF10-206ENST00000494851 SYNJ2O15056 1496 aa21■□□□□ 0.95
TNFSF10-206ENST00000494851 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
TNFSF10-206ENST00000494851 ADAMTS12P58397 1594 aa20.89■□□□□ 0.93
TNFSF10-206ENST00000494851 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
TNFSF10-206ENST00000494851 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
TNFSF10-206ENST00000494851 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
TNFSF10-206ENST00000494851 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
TNFSF10-206ENST00000494851 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
TNFSF10-206ENST00000494851 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
TNFSF10-206ENST00000494851 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
TNFSF10-206ENST00000494851 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
TNFSF10-206ENST00000494851 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
TNFSF10-206ENST00000494851 IGF1RP08069 1367 aa20.81■□□□□ 0.92
TNFSF10-206ENST00000494851 NUP160Q12769 1436 aa20.76■□□□□ 0.91
TNFSF10-206ENST00000494851 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
TNFSF10-206ENST00000494851 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
TNFSF10-206ENST00000494851 CUL7Q14999 1698 aa20.7■□□□□ 0.91
TNFSF10-206ENST00000494851 CARMIL1Q5VZK9 1371 aa20.69■□□□□ 0.9
TNFSF10-206ENST00000494851 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
TNFSF10-206ENST00000494851 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
TNFSF10-206ENST00000494851 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
TNFSF10-206ENST00000494851 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms