RNA–Protein interactions for RNA: ENST00000494839.1

OBSCN-209, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 2

Gene OBSCN, Length 583 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-209ENST00000494839 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
OBSCN-209ENST00000494839 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
OBSCN-209ENST00000494839 ABCC9O60706 1549 aa35.34■■■■□ 3.25
OBSCN-209ENST00000494839 RB1CC1Q8TDY2 1594 aa33.79■■■■□ 3
OBSCN-209ENST00000494839 NACADO15069 1562 aa33.64■■■□□ 2.98
OBSCN-209ENST00000494839 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
OBSCN-209ENST00000494839 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
OBSCN-209ENST00000494839 ZCCHC6Q5VYS8 1495 aaKnown RBP33.19■■■□□ 2.9
OBSCN-209ENST00000494839 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
OBSCN-209ENST00000494839 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
OBSCN-209ENST00000494839 PABPN1Q86U42 306 aaKnown RBP eCLIP32.91■■■□□ 2.86
OBSCN-209ENST00000494839 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
OBSCN-209ENST00000494839 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
OBSCN-209ENST00000494839 SCRIBQ14160 1630 aa32.54■■■□□ 2.8
OBSCN-209ENST00000494839 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
OBSCN-209ENST00000494839 EIF4G1Q04637 1599 aaKnown RBP31.99■■■□□ 2.71
OBSCN-209ENST00000494839 CC2D2AQ9P2K1 1620 aa31.97■■■□□ 2.71
OBSCN-209ENST00000494839 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
OBSCN-209ENST00000494839 SMARCA4P51532 1647 aa31.09■■■□□ 2.57
OBSCN-209ENST00000494839 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
OBSCN-209ENST00000494839 ATAD2BQ9ULI0 1458 aa31.02■■■□□ 2.56
OBSCN-209ENST00000494839 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
OBSCN-209ENST00000494839 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
OBSCN-209ENST00000494839 HMGXB3Q12766 1538 aa30.89■■■□□ 2.54
OBSCN-209ENST00000494839 PEG3Q9GZU2 1588 aa30.82■■■□□ 2.52
OBSCN-209ENST00000494839 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
OBSCN-209ENST00000494839 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
OBSCN-209ENST00000494839 NESP48681 1621 aa30.48■■■□□ 2.47
OBSCN-209ENST00000494839 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
OBSCN-209ENST00000494839 WIZO95785 1651 aa30.43■■■□□ 2.46
OBSCN-209ENST00000494839 CUX2O14529 1486 aa30.33■■■□□ 2.45
OBSCN-209ENST00000494839 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
OBSCN-209ENST00000494839 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
OBSCN-209ENST00000494839 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
OBSCN-209ENST00000494839 KIF21AQ7Z4S6 1674 aa30.12■■■□□ 2.41
OBSCN-209ENST00000494839 CADPSQ9ULU8 1353 aa30.11■■■□□ 2.41
OBSCN-209ENST00000494839 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
OBSCN-209ENST00000494839 TOP2AP11388 1531 aaKnown RBP30.06■■■□□ 2.4
OBSCN-209ENST00000494839 DNAJC5Q9H3Z4 198 aa29.89■■■□□ 2.38
OBSCN-209ENST00000494839 CFTRP13569 1480 aa29.87■■■□□ 2.37
OBSCN-209ENST00000494839 MRC2Q9UBG0 1479 aa29.84■■■□□ 2.37
OBSCN-209ENST00000494839 WDR62O43379 1518 aa29.79■■■□□ 2.36
OBSCN-209ENST00000494839 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
OBSCN-209ENST00000494839 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
OBSCN-209ENST00000494839 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
OBSCN-209ENST00000494839 PRDM2Q13029 1718 aa29.63■■■□□ 2.33
OBSCN-209ENST00000494839 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
OBSCN-209ENST00000494839 TOPBP1Q92547 1522 aa29.27■■■□□ 2.28
OBSCN-209ENST00000494839 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.26
OBSCN-209ENST00000494839 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
OBSCN-209ENST00000494839 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
OBSCN-209ENST00000494839 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
OBSCN-209ENST00000494839 SUPT5HO00267 1087 aaKnown RBP29.04■■■□□ 2.24
OBSCN-209ENST00000494839 TARBP1Q13395 1621 aaKnown RBP29.02■■■□□ 2.24
OBSCN-209ENST00000494839 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
OBSCN-209ENST00000494839 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
OBSCN-209ENST00000494839 CUX1P39880 1505 aa28.91■■■□□ 2.22
OBSCN-209ENST00000494839 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
OBSCN-209ENST00000494839 AQRO60306 1485 aaKnown RBP eCLIP28.87■■■□□ 2.21
OBSCN-209ENST00000494839 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
OBSCN-209ENST00000494839 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
OBSCN-209ENST00000494839 SOGA1O94964 1423 aa28.81■■■□□ 2.2
OBSCN-209ENST00000494839 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
OBSCN-209ENST00000494839 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
OBSCN-209ENST00000494839 CHD1O14646 1710 aa28.71■■■□□ 2.19
OBSCN-209ENST00000494839 TRIM41Q8WV44 630 aa28.67■■■□□ 2.18
OBSCN-209ENST00000494839 RIMBP3CA6NJZ7 1639 aa28.61■■■□□ 2.17
OBSCN-209ENST00000494839 RIMBP3BA6NNM3 1639 aa28.61■■■□□ 2.17
OBSCN-209ENST00000494839 RIMBP3Q9UFD9 1639 aa28.61■■■□□ 2.17
OBSCN-209ENST00000494839 SNAPC4Q5SXM2 1469 aa28.6■■■□□ 2.17
OBSCN-209ENST00000494839 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
OBSCN-209ENST00000494839 ARHGEF11O15085 1522 aa28.55■■■□□ 2.16
OBSCN-209ENST00000494839 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
OBSCN-209ENST00000494839 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
OBSCN-209ENST00000494839 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
OBSCN-209ENST00000494839 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
OBSCN-209ENST00000494839 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
OBSCN-209ENST00000494839 SYNJ1O43426 1573 aa28.52■■■□□ 2.16
OBSCN-209ENST00000494839 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
OBSCN-209ENST00000494839 FBLN2P98095 1184 aa28.51■■■□□ 2.15
OBSCN-209ENST00000494839 WRNQ14191 1432 aaPredicted RBP eCLIP28.5■■■□□ 2.15
OBSCN-209ENST00000494839 GAPVD1Q14C86 1478 aa28.49■■■□□ 2.15
OBSCN-209ENST00000494839 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
OBSCN-209ENST00000494839 CLASP1Q7Z460 1538 aa28.41■■■□□ 2.14
OBSCN-209ENST00000494839 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
OBSCN-209ENST00000494839 ARAP1Q96P48 1450 aa28.3■■■□□ 2.12
OBSCN-209ENST00000494839 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
OBSCN-209ENST00000494839 CYB5RLQ6IPT4 315 aa28.22■■■□□ 2.11
OBSCN-209ENST00000494839 GRIN2AQ12879 1464 aa28.21■■■□□ 2.11
OBSCN-209ENST00000494839 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
OBSCN-209ENST00000494839 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
OBSCN-209ENST00000494839 CEP170Q5SW79 1584 aa28.12■■■□□ 2.09
OBSCN-209ENST00000494839 NUP160Q12769 1436 aa28.11■■■□□ 2.09
OBSCN-209ENST00000494839 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
OBSCN-209ENST00000494839 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
OBSCN-209ENST00000494839 KIF27Q86VH2 1401 aa27.91■■■□□ 2.06
OBSCN-209ENST00000494839 IGF1RP08069 1367 aa27.89■■■□□ 2.06
OBSCN-209ENST00000494839 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
OBSCN-209ENST00000494839 CUL7Q14999 1698 aa27.85■■■□□ 2.05
OBSCN-209ENST00000494839 PRG4Q92954 1404 aaPredicted RBP27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms