RNA–Protein interactions for RNA: ENST00000494722.1

SNX8-209, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-209ENST00000494722 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
SNX8-209ENST00000494722 CCDC180Q9P1Z9 1646 aa40.95■■■■■ 4.15
SNX8-209ENST00000494722 ABCC9O60706 1549 aa40.61■■■■■ 4.09
SNX8-209ENST00000494722 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
SNX8-209ENST00000494722 NACADO15069 1562 aa38.66■■■■□ 3.78
SNX8-209ENST00000494722 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
SNX8-209ENST00000494722 MYO15BQ96JP2 1530 aa38.22■■■■□ 3.71
SNX8-209ENST00000494722 UNC13AQ9UPW8 1703 aa37.94■■■■□ 3.66
SNX8-209ENST00000494722 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
SNX8-209ENST00000494722 DNAJC5BQ9UF47 199 aa37.81■■■■□ 3.64
SNX8-209ENST00000494722 PABPN1Q86U42 306 aaKnown RBP eCLIP37.8■■■■□ 3.64
SNX8-209ENST00000494722 DCAF1Q9Y4B6 1507 aa37.8■■■■□ 3.64
SNX8-209ENST00000494722 BICRAQ9NZM4 1560 aa37.63■■■■□ 3.61
SNX8-209ENST00000494722 SHROOM4Q9ULL8 1493 aa37.3■■■■□ 3.56
SNX8-209ENST00000494722 SCRIBQ14160 1630 aa37.21■■■■□ 3.55
SNX8-209ENST00000494722 CC2D2AQ9P2K1 1620 aa36.74■■■■□ 3.47
SNX8-209ENST00000494722 EIF4G1Q04637 1599 aaKnown RBP36.73■■■■□ 3.47
SNX8-209ENST00000494722 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
SNX8-209ENST00000494722 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
SNX8-209ENST00000494722 SMARCA4P51532 1647 aa35.57■■■■□ 3.29
SNX8-209ENST00000494722 ATAD2BQ9ULI0 1458 aa35.54■■■■□ 3.28
SNX8-209ENST00000494722 SMARCA2P51531 1590 aa35.51■■■■□ 3.28
SNX8-209ENST00000494722 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
SNX8-209ENST00000494722 HMGXB3Q12766 1538 aa35.42■■■■□ 3.26
SNX8-209ENST00000494722 PEG3Q9GZU2 1588 aa35.26■■■■□ 3.24
SNX8-209ENST00000494722 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
SNX8-209ENST00000494722 MROH2BQ7Z745 1585 aa35.12■■■■□ 3.21
SNX8-209ENST00000494722 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
SNX8-209ENST00000494722 CUX2O14529 1486 aa35.02■■■■□ 3.2
SNX8-209ENST00000494722 NESP48681 1621 aa34.92■■■■□ 3.18
SNX8-209ENST00000494722 LAMC3Q9Y6N6 1575 aa34.84■■■■□ 3.17
SNX8-209ENST00000494722 WIZO95785 1651 aa34.73■■■■□ 3.15
SNX8-209ENST00000494722 DNAJC5Q9H3Z4 198 aa34.68■■■■□ 3.14
SNX8-209ENST00000494722 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
SNX8-209ENST00000494722 THOC2Q8NI27 1593 aaKnown RBP34.59■■■■□ 3.13
SNX8-209ENST00000494722 CADPSQ9ULU8 1353 aa34.56■■■■□ 3.12
SNX8-209ENST00000494722 KIF21AQ7Z4S6 1674 aa34.54■■■■□ 3.12
SNX8-209ENST00000494722 RSF1Q96T23 1441 aaPredicted RBP34.49■■■■□ 3.11
SNX8-209ENST00000494722 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
SNX8-209ENST00000494722 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
SNX8-209ENST00000494722 CFTRP13569 1480 aa34.21■■■■□ 3.07
SNX8-209ENST00000494722 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
SNX8-209ENST00000494722 WDR62O43379 1518 aa34.2■■■■□ 3.06
SNX8-209ENST00000494722 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
SNX8-209ENST00000494722 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
SNX8-209ENST00000494722 CCDC88BA6NC98 1476 aa33.92■■■■□ 3.02
SNX8-209ENST00000494722 URB2Q14146 1524 aaKnown RBP33.82■■■■□ 3
SNX8-209ENST00000494722 ABCC8Q09428 1581 aa33.58■■■□□ 2.97
SNX8-209ENST00000494722 TOPBP1Q92547 1522 aa33.53■■■□□ 2.96
SNX8-209ENST00000494722 IFT140Q96RY7 1462 aa33.52■■■□□ 2.96
SNX8-209ENST00000494722 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
SNX8-209ENST00000494722 OSCARQ8IYS5 282 aa33.42■■■□□ 2.94
SNX8-209ENST00000494722 ZNF608Q9ULD9 1512 aaPredicted RBP33.34■■■□□ 2.93
SNX8-209ENST00000494722 EIF4G3O43432 1585 aaKnown RBP33.24■■■□□ 2.91
SNX8-209ENST00000494722 TARBP1Q13395 1621 aaKnown RBP33.22■■■□□ 2.91
SNX8-209ENST00000494722 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
SNX8-209ENST00000494722 POLA1P09884 1462 aaPredicted RBP33.19■■■□□ 2.9
SNX8-209ENST00000494722 AQRO60306 1485 aaKnown RBP eCLIP33.08■■■□□ 2.89
SNX8-209ENST00000494722 SUPT5HO00267 1087 aaKnown RBP33.08■■■□□ 2.89
SNX8-209ENST00000494722 SOGA1O94964 1423 aa33.06■■■□□ 2.88
SNX8-209ENST00000494722 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
SNX8-209ENST00000494722 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
SNX8-209ENST00000494722 FGD5Q6ZNL6 1462 aa33.01■■■□□ 2.88
SNX8-209ENST00000494722 CUX1P39880 1505 aa33■■■□□ 2.87
SNX8-209ENST00000494722 CHD1O14646 1710 aa32.96■■■□□ 2.87
SNX8-209ENST00000494722 RIMBP3CA6NJZ7 1639 aa32.93■■■□□ 2.86
SNX8-209ENST00000494722 RIMBP3BA6NNM3 1639 aa32.93■■■□□ 2.86
SNX8-209ENST00000494722 RIMBP3Q9UFD9 1639 aa32.93■■■□□ 2.86
SNX8-209ENST00000494722 TDRD9Q8NDG6 1382 aaKnown RBP32.91■■■□□ 2.86
SNX8-209ENST00000494722 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
SNX8-209ENST00000494722 FBLN2P98095 1184 aa32.84■■■□□ 2.85
SNX8-209ENST00000494722 SNAPC4Q5SXM2 1469 aa32.78■■■□□ 2.84
SNX8-209ENST00000494722 GRIN2BQ13224 1484 aa32.77■■■□□ 2.84
SNX8-209ENST00000494722 MAGI1Q96QZ7 1491 aaPredicted RBP32.77■■■□□ 2.84
SNX8-209ENST00000494722 ABCA10Q8WWZ4 1543 aa32.69■■■□□ 2.82
SNX8-209ENST00000494722 CHMP7Q8WUX9 453 aaPredicted RBP32.68■■■□□ 2.82
SNX8-209ENST00000494722 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
SNX8-209ENST00000494722 PBRM1Q86U86 1689 aa32.66■■■□□ 2.82
SNX8-209ENST00000494722 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
SNX8-209ENST00000494722 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
SNX8-209ENST00000494722 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
SNX8-209ENST00000494722 ABCA5Q8WWZ7 1642 aa32.61■■■□□ 2.81
SNX8-209ENST00000494722 BIVM-ERCC5R4GMW8 1640 aa32.59■■■□□ 2.81
SNX8-209ENST00000494722 TOP2BQ02880 1626 aa32.59■■■□□ 2.81
SNX8-209ENST00000494722 CLASP1Q7Z460 1538 aa32.58■■■□□ 2.81
SNX8-209ENST00000494722 CYB5RLQ6IPT4 315 aa32.57■■■□□ 2.8
SNX8-209ENST00000494722 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
SNX8-209ENST00000494722 ADAMTS12P58397 1594 aa32.35■■■□□ 2.77
SNX8-209ENST00000494722 GRIN2AQ12879 1464 aa32.34■■■□□ 2.77
SNX8-209ENST00000494722 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
SNX8-209ENST00000494722 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
SNX8-209ENST00000494722 NUP160Q12769 1436 aa32.22■■■□□ 2.75
SNX8-209ENST00000494722 CEP170Q5SW79 1584 aa32.18■■■□□ 2.74
SNX8-209ENST00000494722 TRHP20396 242 aaPredicted RBP32.16■■■□□ 2.74
SNX8-209ENST00000494722 SHROOM2Q13796 1616 aa32.07■■■□□ 2.72
SNX8-209ENST00000494722 ERCC6L2Q5T890 1561 aa32■■■□□ 2.71
SNX8-209ENST00000494722 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
SNX8-209ENST00000494722 CUL7Q14999 1698 aa31.9■■■□□ 2.7
SNX8-209ENST00000494722 JPH4Q96JJ6 628 aa31.88■■■□□ 2.69
SNX8-209ENST00000494722 IGF1RP08069 1367 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms