RNA–Protein interactions for RNA: ENST00000494683.1

DENND4B-212, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-212ENST00000494683 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
DENND4B-212ENST00000494683 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
DENND4B-212ENST00000494683 ABCC9O60706 1549 aa29.93■■■□□ 2.38
DENND4B-212ENST00000494683 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
DENND4B-212ENST00000494683 NACADO15069 1562 aa28.67■■■□□ 2.18
DENND4B-212ENST00000494683 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
DENND4B-212ENST00000494683 ZCCHC6Q5VYS8 1495 aaKnown RBP28.45■■■□□ 2.14
DENND4B-212ENST00000494683 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
DENND4B-212ENST00000494683 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
DENND4B-212ENST00000494683 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
DENND4B-212ENST00000494683 BICRAQ9NZM4 1560 aa27.93■■■□□ 2.06
DENND4B-212ENST00000494683 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
DENND4B-212ENST00000494683 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
DENND4B-212ENST00000494683 SHROOM4Q9ULL8 1493 aa27.61■■■□□ 2.01
DENND4B-212ENST00000494683 DNAJC5BQ9UF47 199 aa27.58■■■□□ 2.01
DENND4B-212ENST00000494683 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
DENND4B-212ENST00000494683 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
DENND4B-212ENST00000494683 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
DENND4B-212ENST00000494683 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
DENND4B-212ENST00000494683 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
DENND4B-212ENST00000494683 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
DENND4B-212ENST00000494683 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
DENND4B-212ENST00000494683 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
DENND4B-212ENST00000494683 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
DENND4B-212ENST00000494683 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.81
DENND4B-212ENST00000494683 MROH2BQ7Z745 1585 aa26.32■■□□□ 1.8
DENND4B-212ENST00000494683 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
DENND4B-212ENST00000494683 WIZO95785 1651 aa26.05■■□□□ 1.76
DENND4B-212ENST00000494683 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
DENND4B-212ENST00000494683 NESP48681 1621 aa25.87■■□□□ 1.73
DENND4B-212ENST00000494683 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
DENND4B-212ENST00000494683 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
DENND4B-212ENST00000494683 TOP2AP11388 1531 aaKnown RBP25.77■■□□□ 1.72
DENND4B-212ENST00000494683 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
DENND4B-212ENST00000494683 CUX2O14529 1486 aa25.62■■□□□ 1.69
DENND4B-212ENST00000494683 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
DENND4B-212ENST00000494683 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
DENND4B-212ENST00000494683 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
DENND4B-212ENST00000494683 CFTRP13569 1480 aa25.47■■□□□ 1.67
DENND4B-212ENST00000494683 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
DENND4B-212ENST00000494683 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
DENND4B-212ENST00000494683 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
DENND4B-212ENST00000494683 FANCD2Q9BXW9 1451 aa25.35■■□□□ 1.65
DENND4B-212ENST00000494683 CEP164Q9UPV0 1460 aa25.35■■□□□ 1.65
DENND4B-212ENST00000494683 WDR62O43379 1518 aa25.33■■□□□ 1.65
DENND4B-212ENST00000494683 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.62
DENND4B-212ENST00000494683 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
DENND4B-212ENST00000494683 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
DENND4B-212ENST00000494683 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
DENND4B-212ENST00000494683 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
DENND4B-212ENST00000494683 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
DENND4B-212ENST00000494683 IFT140Q96RY7 1462 aa24.82■■□□□ 1.56
DENND4B-212ENST00000494683 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
DENND4B-212ENST00000494683 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
DENND4B-212ENST00000494683 POLA1P09884 1462 aaPredicted RBP24.73■■□□□ 1.55
DENND4B-212ENST00000494683 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
DENND4B-212ENST00000494683 CUX1P39880 1505 aa24.71■■□□□ 1.55
DENND4B-212ENST00000494683 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
DENND4B-212ENST00000494683 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
DENND4B-212ENST00000494683 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
DENND4B-212ENST00000494683 SOGA1O94964 1423 aa24.55■■□□□ 1.52
DENND4B-212ENST00000494683 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.524e-9■■■■■ 35.5
DENND4B-212ENST00000494683 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
DENND4B-212ENST00000494683 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
DENND4B-212ENST00000494683 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
DENND4B-212ENST00000494683 CHD1O14646 1710 aa24.44■■□□□ 1.5
DENND4B-212ENST00000494683 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
DENND4B-212ENST00000494683 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
DENND4B-212ENST00000494683 OSCARQ8IYS5 282 aa24.4■■□□□ 1.5
DENND4B-212ENST00000494683 ABCA10Q8WWZ4 1543 aa24.39■■□□□ 1.49
DENND4B-212ENST00000494683 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
DENND4B-212ENST00000494683 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
DENND4B-212ENST00000494683 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
DENND4B-212ENST00000494683 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
DENND4B-212ENST00000494683 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
DENND4B-212ENST00000494683 GAPVD1Q14C86 1478 aa24.3■■□□□ 1.48
DENND4B-212ENST00000494683 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
DENND4B-212ENST00000494683 RIMBP3CA6NJZ7 1639 aa24.2■■□□□ 1.46
DENND4B-212ENST00000494683 RIMBP3BA6NNM3 1639 aa24.2■■□□□ 1.46
DENND4B-212ENST00000494683 RIMBP3Q9UFD9 1639 aa24.2■■□□□ 1.46
DENND4B-212ENST00000494683 FBLN2P98095 1184 aa24.17■■□□□ 1.46
DENND4B-212ENST00000494683 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
DENND4B-212ENST00000494683 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
DENND4B-212ENST00000494683 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
DENND4B-212ENST00000494683 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
DENND4B-212ENST00000494683 CHMP7Q8WUX9 453 aaPredicted RBP24.1■■□□□ 1.45
DENND4B-212ENST00000494683 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
DENND4B-212ENST00000494683 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
DENND4B-212ENST00000494683 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
DENND4B-212ENST00000494683 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
DENND4B-212ENST00000494683 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
DENND4B-212ENST00000494683 NUP160Q12769 1436 aa23.94■■□□□ 1.42
DENND4B-212ENST00000494683 KIF27Q86VH2 1401 aa23.92■■□□□ 1.42
DENND4B-212ENST00000494683 CUL7Q14999 1698 aa23.89■■□□□ 1.41
DENND4B-212ENST00000494683 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
DENND4B-212ENST00000494683 IGF1RP08069 1367 aa23.82■■□□□ 1.4
DENND4B-212ENST00000494683 RUSC2Q8N2Y8 1516 aa23.82■■□□□ 1.4
DENND4B-212ENST00000494683 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
DENND4B-212ENST00000494683 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
DENND4B-212ENST00000494683 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms