RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
PRPF4B-209ENST00000494674 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
PRPF4B-209ENST00000494674 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
PRPF4B-209ENST00000494674 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
PRPF4B-209ENST00000494674 AEBP2Q6ZN18 517 aaPredicted RBP19.55■□□□□ 0.72
PRPF4B-209ENST00000494674 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
PRPF4B-209ENST00000494674 DCAF8L2P0C7V8 631 aa19.41■□□□□ 0.7
PRPF4B-209ENST00000494674 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
PRPF4B-209ENST00000494674 ABCC9O60706 1549 aa19.29■□□□□ 0.68
PRPF4B-209ENST00000494674 NACADO15069 1562 aa19.15■□□□□ 0.66
PRPF4B-209ENST00000494674 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
PRPF4B-209ENST00000494674 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
PRPF4B-209ENST00000494674 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
PRPF4B-209ENST00000494674 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
PRPF4B-209ENST00000494674 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
PRPF4B-209ENST00000494674 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
PRPF4B-209ENST00000494674 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
PRPF4B-209ENST00000494674 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
PRPF4B-209ENST00000494674 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
PRPF4B-209ENST00000494674 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
PRPF4B-209ENST00000494674 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
PRPF4B-209ENST00000494674 WIZO95785 1651 aa18.3■□□□□ 0.52
PRPF4B-209ENST00000494674 SMARCA4P51532 1647 aa18.27■□□□□ 0.52
PRPF4B-209ENST00000494674 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRPF4B-209ENST00000494674 TOP2AP11388 1531 aaKnown RBP18.08■□□□□ 0.49
PRPF4B-209ENST00000494674 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
PRPF4B-209ENST00000494674 EIF4G1Q04637 1599 aaKnown RBP17.97■□□□□ 0.47
PRPF4B-209ENST00000494674 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
PRPF4B-209ENST00000494674 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
PRPF4B-209ENST00000494674 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
PRPF4B-209ENST00000494674 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
PRPF4B-209ENST00000494674 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
PRPF4B-209ENST00000494674 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
PRPF4B-209ENST00000494674 NCAPD3P42695 1498 aa17.67■□□□□ 0.42
PRPF4B-209ENST00000494674 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
PRPF4B-209ENST00000494674 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
PRPF4B-209ENST00000494674 CC2D2AQ9P2K1 1620 aa17.51■□□□□ 0.39
PRPF4B-209ENST00000494674 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
PRPF4B-209ENST00000494674 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
PRPF4B-209ENST00000494674 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
PRPF4B-209ENST00000494674 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
PRPF4B-209ENST00000494674 CFTRP13569 1480 aa17.35■□□□□ 0.37
PRPF4B-209ENST00000494674 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
PRPF4B-209ENST00000494674 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
PRPF4B-209ENST00000494674 SOGA1O94964 1423 aa17.29■□□□□ 0.36
PRPF4B-209ENST00000494674 EEA1Q15075 1411 aa17.25■□□□□ 0.35
PRPF4B-209ENST00000494674 RUSC2Q8N2Y8 1516 aa17.25■□□□□ 0.35
PRPF4B-209ENST00000494674 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
PRPF4B-209ENST00000494674 CUX1P39880 1505 aa17.21■□□□□ 0.35
PRPF4B-209ENST00000494674 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
PRPF4B-209ENST00000494674 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
PRPF4B-209ENST00000494674 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
PRPF4B-209ENST00000494674 KIF21BO75037 1637 aa17.11■□□□□ 0.33
PRPF4B-209ENST00000494674 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
PRPF4B-209ENST00000494674 NESP48681 1621 aa17.05■□□□□ 0.32
PRPF4B-209ENST00000494674 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
PRPF4B-209ENST00000494674 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
PRPF4B-209ENST00000494674 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
PRPF4B-209ENST00000494674 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
PRPF4B-209ENST00000494674 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
PRPF4B-209ENST00000494674 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
PRPF4B-209ENST00000494674 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
PRPF4B-209ENST00000494674 FGD5Q6ZNL6 1462 aa16.96■□□□□ 0.31
PRPF4B-209ENST00000494674 RAPGEF2Q9Y4G8 1499 aa16.94■□□□□ 0.3
PRPF4B-209ENST00000494674 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
PRPF4B-209ENST00000494674 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
PRPF4B-209ENST00000494674 KIF27Q86VH2 1401 aa16.92■□□□□ 0.3
PRPF4B-209ENST00000494674 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
PRPF4B-209ENST00000494674 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
PRPF4B-209ENST00000494674 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
PRPF4B-209ENST00000494674 UBTFP17480 764 aaKnown RBP16.87■□□□□ 0.29
PRPF4B-209ENST00000494674 URB2Q14146 1524 aaKnown RBP16.86■□□□□ 0.29
PRPF4B-209ENST00000494674 CUX2O14529 1486 aa16.85■□□□□ 0.29
PRPF4B-209ENST00000494674 POLA1P09884 1462 aaPredicted RBP16.84■□□□□ 0.29
PRPF4B-209ENST00000494674 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
PRPF4B-209ENST00000494674 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
PRPF4B-209ENST00000494674 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
PRPF4B-209ENST00000494674 ABCA10Q8WWZ4 1543 aa16.81■□□□□ 0.28
PRPF4B-209ENST00000494674 RAD54L2Q9Y4B4 1467 aa16.78■□□□□ 0.28
PRPF4B-209ENST00000494674 CLIP1P30622 1438 aa16.78■□□□□ 0.28
PRPF4B-209ENST00000494674 IGF1RP08069 1367 aa16.77■□□□□ 0.28
PRPF4B-209ENST00000494674 ABCA5Q8WWZ7 1642 aa16.71■□□□□ 0.27
PRPF4B-209ENST00000494674 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
PRPF4B-209ENST00000494674 VPS8Q8N3P4 1428 aa16.68■□□□□ 0.26
PRPF4B-209ENST00000494674 CUL7Q14999 1698 aa16.68■□□□□ 0.26
PRPF4B-209ENST00000494674 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
PRPF4B-209ENST00000494674 MRC2Q9UBG0 1479 aa16.66■□□□□ 0.26
PRPF4B-209ENST00000494674 ARAP1Q96P48 1450 aa16.66■□□□□ 0.26
PRPF4B-209ENST00000494674 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
PRPF4B-209ENST00000494674 HRCP23327 699 aa16.64■□□□□ 0.25
PRPF4B-209ENST00000494674 WDR62O43379 1518 aa16.6■□□□□ 0.25
PRPF4B-209ENST00000494674 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
PRPF4B-209ENST00000494674 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
PRPF4B-209ENST00000494674 GAPVD1Q14C86 1478 aa16.57■□□□□ 0.24
PRPF4B-209ENST00000494674 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
PRPF4B-209ENST00000494674 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
PRPF4B-209ENST00000494674 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
PRPF4B-209ENST00000494674 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
PRPF4B-209ENST00000494674 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
PRPF4B-209ENST00000494674 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms