RNA–Protein interactions for RNA: ENST00000494634.1

GABBR1-219, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-219ENST00000494634 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.6
GABBR1-219ENST00000494634 ABCC9O60706 1549 aa17.11■□□□□ 0.33
GABBR1-219ENST00000494634 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
GABBR1-219ENST00000494634 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
GABBR1-219ENST00000494634 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
GABBR1-219ENST00000494634 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
GABBR1-219ENST00000494634 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
GABBR1-219ENST00000494634 NACADO15069 1562 aa15.93■□□□□ 0.14
GABBR1-219ENST00000494634 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
GABBR1-219ENST00000494634 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
GABBR1-219ENST00000494634 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
GABBR1-219ENST00000494634 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
GABBR1-219ENST00000494634 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
GABBR1-219ENST00000494634 DCAF1Q9Y4B6 1507 aa15.4■□□□□ 0.06
GABBR1-219ENST00000494634 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
GABBR1-219ENST00000494634 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
GABBR1-219ENST00000494634 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
GABBR1-219ENST00000494634 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
GABBR1-219ENST00000494634 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
GABBR1-219ENST00000494634 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
GABBR1-219ENST00000494634 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
GABBR1-219ENST00000494634 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
GABBR1-219ENST00000494634 CUX2O14529 1486 aa14.69□□□□□ -0.06
GABBR1-219ENST00000494634 NESP48681 1621 aa14.65□□□□□ -0.06
GABBR1-219ENST00000494634 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
GABBR1-219ENST00000494634 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
GABBR1-219ENST00000494634 SMARCA4P51532 1647 aa14.58□□□□□ -0.08
GABBR1-219ENST00000494634 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
GABBR1-219ENST00000494634 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
GABBR1-219ENST00000494634 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
GABBR1-219ENST00000494634 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
GABBR1-219ENST00000494634 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
GABBR1-219ENST00000494634 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
GABBR1-219ENST00000494634 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
GABBR1-219ENST00000494634 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
GABBR1-219ENST00000494634 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
GABBR1-219ENST00000494634 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
GABBR1-219ENST00000494634 WIZO95785 1651 aa14.23□□□□□ -0.13
GABBR1-219ENST00000494634 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
GABBR1-219ENST00000494634 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
GABBR1-219ENST00000494634 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
GABBR1-219ENST00000494634 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
GABBR1-219ENST00000494634 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
GABBR1-219ENST00000494634 WDR62O43379 1518 aa14.16□□□□□ -0.14
GABBR1-219ENST00000494634 CFTRP13569 1480 aa14.16□□□□□ -0.14
GABBR1-219ENST00000494634 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
GABBR1-219ENST00000494634 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
GABBR1-219ENST00000494634 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
GABBR1-219ENST00000494634 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
GABBR1-219ENST00000494634 FBLN2P98095 1184 aa13.96□□□□□ -0.17
GABBR1-219ENST00000494634 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
GABBR1-219ENST00000494634 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
GABBR1-219ENST00000494634 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■□□ 19
GABBR1-219ENST00000494634 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
GABBR1-219ENST00000494634 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
GABBR1-219ENST00000494634 TRHP20396 242 aaPredicted RBP13.85□□□□□ -0.19
GABBR1-219ENST00000494634 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
GABBR1-219ENST00000494634 TDRD9Q8NDG6 1382 aaKnown RBP13.83□□□□□ -0.2
GABBR1-219ENST00000494634 ARHGEF11O15085 1522 aa13.8□□□□□ -0.2
GABBR1-219ENST00000494634 SOGA1O94964 1423 aa13.79□□□□□ -0.2
GABBR1-219ENST00000494634 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
GABBR1-219ENST00000494634 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
GABBR1-219ENST00000494634 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
GABBR1-219ENST00000494634 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
GABBR1-219ENST00000494634 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
GABBR1-219ENST00000494634 DNMBPQ6XZF7 1577 aa13.75□□□□□ -0.21
GABBR1-219ENST00000494634 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
GABBR1-219ENST00000494634 EIF4G3O43432 1585 aaKnown RBP13.71□□□□□ -0.22
GABBR1-219ENST00000494634 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
GABBR1-219ENST00000494634 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
GABBR1-219ENST00000494634 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
GABBR1-219ENST00000494634 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
GABBR1-219ENST00000494634 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
GABBR1-219ENST00000494634 PRDM2Q13029 1718 aa13.63□□□□□ -0.23
GABBR1-219ENST00000494634 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
GABBR1-219ENST00000494634 CUX1P39880 1505 aa13.59□□□□□ -0.23
GABBR1-219ENST00000494634 CHD1O14646 1710 aa13.56□□□□□ -0.24
GABBR1-219ENST00000494634 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
GABBR1-219ENST00000494634 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
GABBR1-219ENST00000494634 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
GABBR1-219ENST00000494634 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
GABBR1-219ENST00000494634 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
GABBR1-219ENST00000494634 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
GABBR1-219ENST00000494634 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
GABBR1-219ENST00000494634 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
GABBR1-219ENST00000494634 JPH4Q96JJ6 628 aa13.41□□□□□ -0.26
GABBR1-219ENST00000494634 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
GABBR1-219ENST00000494634 CHIC1Q5VXU3 224 aa13.38□□□□□ -0.27
GABBR1-219ENST00000494634 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
GABBR1-219ENST00000494634 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
GABBR1-219ENST00000494634 NUP160Q12769 1436 aa13.35□□□□□ -0.27
GABBR1-219ENST00000494634 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
GABBR1-219ENST00000494634 ABCA5Q8WWZ7 1642 aa13.34□□□□□ -0.27
GABBR1-219ENST00000494634 PRG4Q92954 1404 aaPredicted RBP13.33□□□□□ -0.28
GABBR1-219ENST00000494634 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
GABBR1-219ENST00000494634 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
GABBR1-219ENST00000494634 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
GABBR1-219ENST00000494634 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
GABBR1-219ENST00000494634 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
GABBR1-219ENST00000494634 ADAMTS12P58397 1594 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms