RNA–Protein interactions for RNA: ENST00000494568.5

PLSCR1-219, Transcript of phospholipid scramblase 1, humanhuman

TSL 2

Gene PLSCR1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-219ENST00000494568 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
PLSCR1-219ENST00000494568 ABCC9O60706 1549 aa27.23■■□□□ 1.95
PLSCR1-219ENST00000494568 CCDC180Q9P1Z9 1646 aa27.17■■□□□ 1.94
PLSCR1-219ENST00000494568 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
PLSCR1-219ENST00000494568 DCAF8L2P0C7V8 631 aa25.86■■□□□ 1.73
PLSCR1-219ENST00000494568 NACADO15069 1562 aa25.77■■□□□ 1.72
PLSCR1-219ENST00000494568 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
PLSCR1-219ENST00000494568 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
PLSCR1-219ENST00000494568 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
PLSCR1-219ENST00000494568 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
PLSCR1-219ENST00000494568 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
PLSCR1-219ENST00000494568 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
PLSCR1-219ENST00000494568 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
PLSCR1-219ENST00000494568 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
PLSCR1-219ENST00000494568 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
PLSCR1-219ENST00000494568 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
PLSCR1-219ENST00000494568 CECR2Q9BXF3 1484 aa24.52■■□□□ 1.52
PLSCR1-219ENST00000494568 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
PLSCR1-219ENST00000494568 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
PLSCR1-219ENST00000494568 ATAD2BQ9ULI0 1458 aa23.77■■□□□ 1.4
PLSCR1-219ENST00000494568 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
PLSCR1-219ENST00000494568 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
PLSCR1-219ENST00000494568 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
PLSCR1-219ENST00000494568 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
PLSCR1-219ENST00000494568 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
PLSCR1-219ENST00000494568 ERCC6Q03468 1493 aa23.52■■□□□ 1.36
PLSCR1-219ENST00000494568 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
PLSCR1-219ENST00000494568 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
PLSCR1-219ENST00000494568 NESP48681 1621 aa23.41■■□□□ 1.34
PLSCR1-219ENST00000494568 CUX2O14529 1486 aa23.4■■□□□ 1.34
PLSCR1-219ENST00000494568 DNAJC5Q9H3Z4 198 aa23.37■■□□□ 1.33
PLSCR1-219ENST00000494568 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
PLSCR1-219ENST00000494568 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
PLSCR1-219ENST00000494568 WIZO95785 1651 aa23.16■■□□□ 1.3
PLSCR1-219ENST00000494568 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
PLSCR1-219ENST00000494568 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.28
PLSCR1-219ENST00000494568 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
PLSCR1-219ENST00000494568 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
PLSCR1-219ENST00000494568 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
PLSCR1-219ENST00000494568 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
PLSCR1-219ENST00000494568 CFTRP13569 1480 aa22.86■■□□□ 1.25
PLSCR1-219ENST00000494568 FANCD2Q9BXW9 1451 aa22.85■■□□□ 1.25
PLSCR1-219ENST00000494568 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
PLSCR1-219ENST00000494568 WDR62O43379 1518 aa22.82■■□□□ 1.24
PLSCR1-219ENST00000494568 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
PLSCR1-219ENST00000494568 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
PLSCR1-219ENST00000494568 OSCARQ8IYS5 282 aa22.47■■□□□ 1.19
PLSCR1-219ENST00000494568 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
PLSCR1-219ENST00000494568 TRIM41Q8WV44 630 aa22.42■■□□□ 1.18
PLSCR1-219ENST00000494568 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
PLSCR1-219ENST00000494568 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
PLSCR1-219ENST00000494568 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
PLSCR1-219ENST00000494568 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
PLSCR1-219ENST00000494568 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
PLSCR1-219ENST00000494568 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
PLSCR1-219ENST00000494568 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.143e-7■■■□□ 16
PLSCR1-219ENST00000494568 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
PLSCR1-219ENST00000494568 SOGA1O94964 1423 aa22.15■■□□□ 1.14
PLSCR1-219ENST00000494568 EIF4G3O43432 1585 aaKnown RBP22.15■■□□□ 1.14
PLSCR1-219ENST00000494568 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
PLSCR1-219ENST00000494568 RAD54L2Q9Y4B4 1467 aa22.14■■□□□ 1.13
PLSCR1-219ENST00000494568 FBLN2P98095 1184 aa22.11■■□□□ 1.13
PLSCR1-219ENST00000494568 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
PLSCR1-219ENST00000494568 FGD5Q6ZNL6 1462 aa22.06■■□□□ 1.12
PLSCR1-219ENST00000494568 CUX1P39880 1505 aa22.05■■□□□ 1.12
PLSCR1-219ENST00000494568 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
PLSCR1-219ENST00000494568 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
PLSCR1-219ENST00000494568 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
PLSCR1-219ENST00000494568 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
PLSCR1-219ENST00000494568 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
PLSCR1-219ENST00000494568 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.1
PLSCR1-219ENST00000494568 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
PLSCR1-219ENST00000494568 CHD1O14646 1710 aa21.92■■□□□ 1.1
PLSCR1-219ENST00000494568 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PLSCR1-219ENST00000494568 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
PLSCR1-219ENST00000494568 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
PLSCR1-219ENST00000494568 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
PLSCR1-219ENST00000494568 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
PLSCR1-219ENST00000494568 SYNJ2O15056 1496 aa21.82■■□□□ 1.08
PLSCR1-219ENST00000494568 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
PLSCR1-219ENST00000494568 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
PLSCR1-219ENST00000494568 SYNJ1O43426 1573 aa21.75■■□□□ 1.07
PLSCR1-219ENST00000494568 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
PLSCR1-219ENST00000494568 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
PLSCR1-219ENST00000494568 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
PLSCR1-219ENST00000494568 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
PLSCR1-219ENST00000494568 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
PLSCR1-219ENST00000494568 BIVM-ERCC5R4GMW8 1640 aa21.65■■□□□ 1.06
PLSCR1-219ENST00000494568 GRIN2AQ12879 1464 aa21.6■■□□□ 1.05
PLSCR1-219ENST00000494568 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
PLSCR1-219ENST00000494568 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
PLSCR1-219ENST00000494568 NUP160Q12769 1436 aa21.54■■□□□ 1.04
PLSCR1-219ENST00000494568 ERICH3Q5RHP9 1530 aa21.53■■□□□ 1.04
PLSCR1-219ENST00000494568 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
PLSCR1-219ENST00000494568 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
PLSCR1-219ENST00000494568 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
PLSCR1-219ENST00000494568 IGF1RP08069 1367 aa21.37■■□□□ 1.01
PLSCR1-219ENST00000494568 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
PLSCR1-219ENST00000494568 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
PLSCR1-219ENST00000494568 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms