RNA–Protein interactions for RNA: ENST00000494554.2

KIFC1-214, Transcript of kinesin family member C1, humanhuman

TSL 2

Gene KIFC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC1-214ENST00000494554 NISCHQ9Y2I1 1504 aa43.26■■■■■ 4.52
KIFC1-214ENST00000494554 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
KIFC1-214ENST00000494554 ABCC9O60706 1549 aa37.49■■■■□ 3.59
KIFC1-214ENST00000494554 RB1CC1Q8TDY2 1594 aa36.13■■■■□ 3.37
KIFC1-214ENST00000494554 NACADO15069 1562 aa36.1■■■■□ 3.37
KIFC1-214ENST00000494554 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
KIFC1-214ENST00000494554 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
KIFC1-214ENST00000494554 MYO15BQ96JP2 1530 aa35.92■■■■□ 3.34
KIFC1-214ENST00000494554 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
KIFC1-214ENST00000494554 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
KIFC1-214ENST00000494554 SCRIBQ14160 1630 aa35.07■■■■□ 3.21
KIFC1-214ENST00000494554 PABPN1Q86U42 306 aaKnown RBP eCLIP35.03■■■■□ 3.2
KIFC1-214ENST00000494554 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
KIFC1-214ENST00000494554 SHROOM4Q9ULL8 1493 aa34.68■■■■□ 3.14
KIFC1-214ENST00000494554 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
KIFC1-214ENST00000494554 EIF4G1Q04637 1599 aaKnown RBP34.09■■■■□ 3.05
KIFC1-214ENST00000494554 CC2D2AQ9P2K1 1620 aa33.92■■■■□ 3.02
KIFC1-214ENST00000494554 CECR2Q9BXF3 1484 aa33.67■■■□□ 2.98
KIFC1-214ENST00000494554 SMARCA4P51532 1647 aa33.57■■■□□ 2.96
KIFC1-214ENST00000494554 BAZ1AQ9NRL2 1556 aaPredicted RBP33.54■■■□□ 2.96
KIFC1-214ENST00000494554 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
KIFC1-214ENST00000494554 ATAD2BQ9ULI0 1458 aa33.33■■■□□ 2.93
KIFC1-214ENST00000494554 SMARCA2P51531 1590 aa33.33■■■□□ 2.93
KIFC1-214ENST00000494554 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
KIFC1-214ENST00000494554 PEG3Q9GZU2 1588 aa33.22■■■□□ 2.91
KIFC1-214ENST00000494554 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
KIFC1-214ENST00000494554 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
KIFC1-214ENST00000494554 WIZO95785 1651 aa33■■■□□ 2.87
KIFC1-214ENST00000494554 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
KIFC1-214ENST00000494554 TOP2AP11388 1531 aaKnown RBP32.66■■■□□ 2.82
KIFC1-214ENST00000494554 NESP48681 1621 aa32.46■■■□□ 2.79
KIFC1-214ENST00000494554 LAMC3Q9Y6N6 1575 aa32.43■■■□□ 2.78
KIFC1-214ENST00000494554 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
KIFC1-214ENST00000494554 ERCC6Q03468 1493 aa32.33■■■□□ 2.77
KIFC1-214ENST00000494554 CCDC88BA6NC98 1476 aa32.25■■■□□ 2.75
KIFC1-214ENST00000494554 SUPT5HO00267 1087 aaKnown RBP32.24■■■□□ 2.75
KIFC1-214ENST00000494554 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
KIFC1-214ENST00000494554 CFTRP13569 1480 aa32.16■■■□□ 2.74
KIFC1-214ENST00000494554 KIF21AQ7Z4S6 1674 aa32.12■■■□□ 2.73
KIFC1-214ENST00000494554 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
KIFC1-214ENST00000494554 FANCD2Q9BXW9 1451 aa31.97■■■□□ 2.71
KIFC1-214ENST00000494554 THOC2Q8NI27 1593 aaKnown RBP31.97■■■□□ 2.71
KIFC1-214ENST00000494554 CUX2O14529 1486 aa31.94■■■□□ 2.7
KIFC1-214ENST00000494554 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
KIFC1-214ENST00000494554 MRC2Q9UBG0 1479 aa31.86■■■□□ 2.69
KIFC1-214ENST00000494554 WDR62O43379 1518 aa31.75■■■□□ 2.67
KIFC1-214ENST00000494554 URB2Q14146 1524 aaKnown RBP31.64■■■□□ 2.66
KIFC1-214ENST00000494554 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
KIFC1-214ENST00000494554 TOPBP1Q92547 1522 aa31.47■■■□□ 2.63
KIFC1-214ENST00000494554 DNMBPQ6XZF7 1577 aa31.47■■■□□ 2.63
KIFC1-214ENST00000494554 CUX1P39880 1505 aa31.27■■■□□ 2.6
KIFC1-214ENST00000494554 IFT140Q96RY7 1462 aa31.26■■■□□ 2.59
KIFC1-214ENST00000494554 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
KIFC1-214ENST00000494554 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
KIFC1-214ENST00000494554 TARBP1Q13395 1621 aaKnown RBP31.13■■■□□ 2.57
KIFC1-214ENST00000494554 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
KIFC1-214ENST00000494554 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
KIFC1-214ENST00000494554 SOGA1O94964 1423 aa31.08■■■□□ 2.57
KIFC1-214ENST00000494554 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
KIFC1-214ENST00000494554 BIVM-ERCC5R4GMW8 1640 aa31.06■■■□□ 2.56
KIFC1-214ENST00000494554 TOP2BQ02880 1626 aa31.05■■■□□ 2.56
KIFC1-214ENST00000494554 SYNJ1O43426 1573 aa31.04■■■□□ 2.56
KIFC1-214ENST00000494554 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
KIFC1-214ENST00000494554 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.541e-16■■■■□ 23.2
KIFC1-214ENST00000494554 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
KIFC1-214ENST00000494554 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
KIFC1-214ENST00000494554 ABCA10Q8WWZ4 1543 aa30.86■■■□□ 2.53
KIFC1-214ENST00000494554 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
KIFC1-214ENST00000494554 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
KIFC1-214ENST00000494554 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
KIFC1-214ENST00000494554 GRIN2BQ13224 1484 aa30.72■■■□□ 2.51
KIFC1-214ENST00000494554 PBRM1Q86U86 1689 aa30.69■■■□□ 2.5
KIFC1-214ENST00000494554 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
KIFC1-214ENST00000494554 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
KIFC1-214ENST00000494554 OSCARQ8IYS5 282 aa30.62■■■□□ 2.49
KIFC1-214ENST00000494554 CHD1O14646 1710 aa30.6■■■□□ 2.49
KIFC1-214ENST00000494554 FBLN2P98095 1184 aa30.55■■■□□ 2.48
KIFC1-214ENST00000494554 SYNJ2O15056 1496 aa30.51■■■□□ 2.48
KIFC1-214ENST00000494554 ERICH3Q5RHP9 1530 aa30.5■■■□□ 2.47
KIFC1-214ENST00000494554 CHMP7Q8WUX9 453 aaPredicted RBP30.49■■■□□ 2.47
KIFC1-214ENST00000494554 KIF27Q86VH2 1401 aa30.47■■■□□ 2.47
KIFC1-214ENST00000494554 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
KIFC1-214ENST00000494554 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
KIFC1-214ENST00000494554 FHAD1B1AJZ9 1412 aa30.39■■■□□ 2.45
KIFC1-214ENST00000494554 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
KIFC1-214ENST00000494554 IGF1RP08069 1367 aa30.29■■■□□ 2.44
KIFC1-214ENST00000494554 CUL7Q14999 1698 aa30.27■■■□□ 2.44
KIFC1-214ENST00000494554 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
KIFC1-214ENST00000494554 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
KIFC1-214ENST00000494554 NUP160Q12769 1436 aa30.17■■■□□ 2.42
KIFC1-214ENST00000494554 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
KIFC1-214ENST00000494554 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
KIFC1-214ENST00000494554 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.41
KIFC1-214ENST00000494554 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
KIFC1-214ENST00000494554 RIMBP3CA6NJZ7 1639 aa30.13■■■□□ 2.41
KIFC1-214ENST00000494554 RIMBP3BA6NNM3 1639 aa30.13■■■□□ 2.41
KIFC1-214ENST00000494554 RIMBP3Q9UFD9 1639 aa30.13■■■□□ 2.41
KIFC1-214ENST00000494554 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
KIFC1-214ENST00000494554 EEA1Q15075 1411 aa29.96■■■□□ 2.39
KIFC1-214ENST00000494554 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms