RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
CBWD6-208ENST00000494538 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
CBWD6-208ENST00000494538 ABCC9O60706 1549 aa25.54■■□□□ 1.68
CBWD6-208ENST00000494538 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
CBWD6-208ENST00000494538 DCAF8L2P0C7V8 631 aa25.18■■□□□ 1.62
CBWD6-208ENST00000494538 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
CBWD6-208ENST00000494538 NACADO15069 1562 aa24.83■■□□□ 1.57
CBWD6-208ENST00000494538 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
CBWD6-208ENST00000494538 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
CBWD6-208ENST00000494538 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
CBWD6-208ENST00000494538 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
CBWD6-208ENST00000494538 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
CBWD6-208ENST00000494538 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
CBWD6-208ENST00000494538 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
CBWD6-208ENST00000494538 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
CBWD6-208ENST00000494538 BAZ1AQ9NRL2 1556 aaPredicted RBP23.37■■□□□ 1.33
CBWD6-208ENST00000494538 SMARCA4P51532 1647 aa23.32■■□□□ 1.32
CBWD6-208ENST00000494538 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
CBWD6-208ENST00000494538 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
CBWD6-208ENST00000494538 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
CBWD6-208ENST00000494538 SUPT5HO00267 1087 aaKnown RBP23.24■■□□□ 1.31
CBWD6-208ENST00000494538 WIZO95785 1651 aa23.11■■□□□ 1.29
CBWD6-208ENST00000494538 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.29
CBWD6-208ENST00000494538 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
CBWD6-208ENST00000494538 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
CBWD6-208ENST00000494538 PEG3Q9GZU2 1588 aa23.02■■□□□ 1.28
CBWD6-208ENST00000494538 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
CBWD6-208ENST00000494538 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
CBWD6-208ENST00000494538 DNAJC5BQ9UF47 199 aa22.88■■□□□ 1.25
CBWD6-208ENST00000494538 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
CBWD6-208ENST00000494538 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
CBWD6-208ENST00000494538 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
CBWD6-208ENST00000494538 CADPSQ9ULU8 1353 aa22.31■■□□□ 1.16
CBWD6-208ENST00000494538 CFTRP13569 1480 aa22.28■■□□□ 1.16
CBWD6-208ENST00000494538 NESP48681 1621 aa22.26■■□□□ 1.15
CBWD6-208ENST00000494538 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
CBWD6-208ENST00000494538 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
CBWD6-208ENST00000494538 PDS5BQ9NTI5 1447 aa22.08■■□□□ 1.13
CBWD6-208ENST00000494538 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
CBWD6-208ENST00000494538 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
CBWD6-208ENST00000494538 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
CBWD6-208ENST00000494538 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
CBWD6-208ENST00000494538 ERCC6Q03468 1493 aa21.97■■□□□ 1.11
CBWD6-208ENST00000494538 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
CBWD6-208ENST00000494538 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
CBWD6-208ENST00000494538 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
CBWD6-208ENST00000494538 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
CBWD6-208ENST00000494538 CUX1P39880 1505 aa21.83■■□□□ 1.08
CBWD6-208ENST00000494538 MRC2Q9UBG0 1479 aa21.81■■□□□ 1.08
CBWD6-208ENST00000494538 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
CBWD6-208ENST00000494538 DNMBPQ6XZF7 1577 aa21.79■■□□□ 1.08
CBWD6-208ENST00000494538 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
CBWD6-208ENST00000494538 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
CBWD6-208ENST00000494538 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
CBWD6-208ENST00000494538 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
CBWD6-208ENST00000494538 WDR62O43379 1518 aa21.7■■□□□ 1.06
CBWD6-208ENST00000494538 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
CBWD6-208ENST00000494538 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
CBWD6-208ENST00000494538 SOGA1O94964 1423 aa21.57■■□□□ 1.04
CBWD6-208ENST00000494538 RAD54L2Q9Y4B4 1467 aa21.57■■□□□ 1.04
CBWD6-208ENST00000494538 CUX2O14529 1486 aa21.52■■□□□ 1.04
CBWD6-208ENST00000494538 FAM9AQ8IZU1 332 aaPredicted RBP21.48■■□□□ 1.03
CBWD6-208ENST00000494538 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
CBWD6-208ENST00000494538 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
CBWD6-208ENST00000494538 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
CBWD6-208ENST00000494538 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
CBWD6-208ENST00000494538 WDR97A6NE52 1622 aa21.42■■□□□ 1.02
CBWD6-208ENST00000494538 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
CBWD6-208ENST00000494538 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
CBWD6-208ENST00000494538 ZNF608Q9ULD9 1512 aaPredicted RBP21.37■■□□□ 1.01
CBWD6-208ENST00000494538 EEA1Q15075 1411 aa21.37■■□□□ 1.01
CBWD6-208ENST00000494538 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.01
CBWD6-208ENST00000494538 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
CBWD6-208ENST00000494538 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
CBWD6-208ENST00000494538 CSRNP3Q8WYN3 585 aa21.31■■□□□ 1
CBWD6-208ENST00000494538 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
CBWD6-208ENST00000494538 IGF1RP08069 1367 aa21.25■□□□□ 0.99
CBWD6-208ENST00000494538 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
CBWD6-208ENST00000494538 GRIN2BQ13224 1484 aa21.23■□□□□ 0.99
CBWD6-208ENST00000494538 EHMT2Q96KQ7 1210 aa21.22■□□□□ 0.99
CBWD6-208ENST00000494538 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
CBWD6-208ENST00000494538 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
CBWD6-208ENST00000494538 CUL7Q14999 1698 aa21.15■□□□□ 0.98
CBWD6-208ENST00000494538 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.98
CBWD6-208ENST00000494538 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
CBWD6-208ENST00000494538 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
CBWD6-208ENST00000494538 KIF21BO75037 1637 aa21.11■□□□□ 0.97
CBWD6-208ENST00000494538 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
CBWD6-208ENST00000494538 RAPGEF2Q9Y4G8 1499 aa21.09■□□□□ 0.97
CBWD6-208ENST00000494538 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.97
CBWD6-208ENST00000494538 ADAMTS12P58397 1594 aa21.08■□□□□ 0.97
CBWD6-208ENST00000494538 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
CBWD6-208ENST00000494538 FBLN2P98095 1184 aa21.06■□□□□ 0.96
CBWD6-208ENST00000494538 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
CBWD6-208ENST00000494538 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
CBWD6-208ENST00000494538 SYNJ2O15056 1496 aa21.02■□□□□ 0.95
CBWD6-208ENST00000494538 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
CBWD6-208ENST00000494538 CHD1O14646 1710 aa20.92■□□□□ 0.94
CBWD6-208ENST00000494538 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.94
CBWD6-208ENST00000494538 RANGAP1P46060 587 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms