RNA–Protein interactions for RNA: ENST00000494535.1

SCARF2-201, Transcript of scavenger receptor class F member 2, humanhuman

TSL 2

Gene SCARF2, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF2-201ENST00000494535 NISCHQ9Y2I1 1504 aa50.83■■■■■ 5.73
SCARF2-201ENST00000494535 CCDC180Q9P1Z9 1646 aa45.58■■■■■ 4.89
SCARF2-201ENST00000494535 ABCC9O60706 1549 aa44.98■■■■■ 4.79
SCARF2-201ENST00000494535 RB1CC1Q8TDY2 1594 aa43.14■■■■■ 4.5
SCARF2-201ENST00000494535 NACADO15069 1562 aa42.96■■■■■ 4.47
SCARF2-201ENST00000494535 MYO15BQ96JP2 1530 aa42.58■■■■■ 4.41
SCARF2-201ENST00000494535 DCAF8L2P0C7V8 631 aa42.48■■■■■ 4.39
SCARF2-201ENST00000494535 ZCCHC6Q5VYS8 1495 aaKnown RBP42.22■■■■■ 4.35
SCARF2-201ENST00000494535 UNC13AQ9UPW8 1703 aa42.17■■■■■ 4.34
SCARF2-201ENST00000494535 DCAF1Q9Y4B6 1507 aa42.14■■■■■ 4.34
SCARF2-201ENST00000494535 PABPN1Q86U42 306 aaKnown RBP eCLIP41.86■■■■■ 4.29
SCARF2-201ENST00000494535 DNAJC5BQ9UF47 199 aa41.84■■■■■ 4.29
SCARF2-201ENST00000494535 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
SCARF2-201ENST00000494535 SHROOM4Q9ULL8 1493 aa41.47■■■■■ 4.23
SCARF2-201ENST00000494535 SCRIBQ14160 1630 aa41.36■■■■■ 4.21
SCARF2-201ENST00000494535 EIF4G1Q04637 1599 aaKnown RBP40.78■■■■■ 4.12
SCARF2-201ENST00000494535 CC2D2AQ9P2K1 1620 aa40.75■■■■■ 4.11
SCARF2-201ENST00000494535 CECR2Q9BXF3 1484 aa40.54■■■■■ 4.08
SCARF2-201ENST00000494535 NCAPD3P42695 1498 aa39.62■■■■□ 3.93
SCARF2-201ENST00000494535 SMARCA4P51532 1647 aa39.58■■■■□ 3.93
SCARF2-201ENST00000494535 ATAD2BQ9ULI0 1458 aa39.5■■■■□ 3.91
SCARF2-201ENST00000494535 SMARCA2P51531 1590 aa39.47■■■■□ 3.91
SCARF2-201ENST00000494535 BAZ1AQ9NRL2 1556 aaPredicted RBP39.46■■■■□ 3.91
SCARF2-201ENST00000494535 HMGXB3Q12766 1538 aa39.4■■■■□ 3.9
SCARF2-201ENST00000494535 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
SCARF2-201ENST00000494535 BAZ1BQ9UIG0 1483 aaKnown RBP39.13■■■■□ 3.85
SCARF2-201ENST00000494535 MROH2BQ7Z745 1585 aa39.12■■■■□ 3.85
SCARF2-201ENST00000494535 ERCC6Q03468 1493 aa38.85■■■■□ 3.81
SCARF2-201ENST00000494535 CUX2O14529 1486 aa38.79■■■■□ 3.8
SCARF2-201ENST00000494535 NESP48681 1621 aa38.75■■■■□ 3.79
SCARF2-201ENST00000494535 LAMC3Q9Y6N6 1575 aa38.7■■■■□ 3.79
SCARF2-201ENST00000494535 WIZO95785 1651 aa38.67■■■■□ 3.78
SCARF2-201ENST00000494535 RSF1Q96T23 1441 aaPredicted RBP38.45■■■■□ 3.75
SCARF2-201ENST00000494535 PDS5BQ9NTI5 1447 aa38.41■■■■□ 3.74
SCARF2-201ENST00000494535 THOC2Q8NI27 1593 aaKnown RBP38.4■■■■□ 3.74
SCARF2-201ENST00000494535 CADPSQ9ULU8 1353 aa38.39■■■■□ 3.74
SCARF2-201ENST00000494535 KIF21AQ7Z4S6 1674 aa38.36■■■■□ 3.73
SCARF2-201ENST00000494535 TOP2AP11388 1531 aaKnown RBP38.27■■■■□ 3.72
SCARF2-201ENST00000494535 DNAJC5Q9H3Z4 198 aa38.25■■■■□ 3.71
SCARF2-201ENST00000494535 CFTRP13569 1480 aa38.06■■■■□ 3.68
SCARF2-201ENST00000494535 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
SCARF2-201ENST00000494535 WDR62O43379 1518 aa37.98■■■■□ 3.67
SCARF2-201ENST00000494535 CEP164Q9UPV0 1460 aa37.96■■■■□ 3.67
SCARF2-201ENST00000494535 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
SCARF2-201ENST00000494535 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
SCARF2-201ENST00000494535 CCDC88BA6NC98 1476 aa37.77■■■■□ 3.64
SCARF2-201ENST00000494535 URB2Q14146 1524 aaKnown RBP37.59■■■■□ 3.61
SCARF2-201ENST00000494535 SUPT5HO00267 1087 aaKnown RBP37.48■■■■□ 3.59
SCARF2-201ENST00000494535 ABCC8Q09428 1581 aa37.31■■■■□ 3.56
SCARF2-201ENST00000494535 TOPBP1Q92547 1522 aa37.26■■■■□ 3.56
SCARF2-201ENST00000494535 IFT140Q96RY7 1462 aa37.21■■■■□ 3.55
SCARF2-201ENST00000494535 DNMBPQ6XZF7 1577 aa37.21■■■■□ 3.55
SCARF2-201ENST00000494535 ZNF608Q9ULD9 1512 aaPredicted RBP37.02■■■■□ 3.52
SCARF2-201ENST00000494535 OSCARQ8IYS5 282 aa36.97■■■■□ 3.51
SCARF2-201ENST00000494535 TARBP1Q13395 1621 aaKnown RBP36.96■■■■□ 3.51
SCARF2-201ENST00000494535 EIF4G3O43432 1585 aaKnown RBP36.91■■■■□ 3.5
SCARF2-201ENST00000494535 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
SCARF2-201ENST00000494535 CUX1P39880 1505 aa36.74■■■■□ 3.47
SCARF2-201ENST00000494535 WDR97A6NE52 1622 aa36.74■■■■□ 3.47
SCARF2-201ENST00000494535 AQRO60306 1485 aaKnown RBP eCLIP36.73■■■■□ 3.472e-8■■■□□ 18.1
SCARF2-201ENST00000494535 SOGA1O94964 1423 aa36.72■■■■□ 3.47
SCARF2-201ENST00000494535 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
SCARF2-201ENST00000494535 RAD54L2Q9Y4B4 1467 aa36.69■■■■□ 3.46
SCARF2-201ENST00000494535 CHD1O14646 1710 aa36.58■■■■□ 3.45
SCARF2-201ENST00000494535 TRIM41Q8WV44 630 aa36.55■■■■□ 3.44
SCARF2-201ENST00000494535 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
SCARF2-201ENST00000494535 RIMBP3CA6NJZ7 1639 aa36.48■■■■□ 3.43
SCARF2-201ENST00000494535 RIMBP3BA6NNM3 1639 aa36.48■■■■□ 3.43
SCARF2-201ENST00000494535 RIMBP3Q9UFD9 1639 aa36.48■■■■□ 3.43
SCARF2-201ENST00000494535 MAGI1Q96QZ7 1491 aaPredicted RBP36.41■■■■□ 3.42
SCARF2-201ENST00000494535 GRIN2BQ13224 1484 aa36.4■■■■□ 3.42
SCARF2-201ENST00000494535 SNAPC4Q5SXM2 1469 aa36.4■■■■□ 3.42
SCARF2-201ENST00000494535 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
SCARF2-201ENST00000494535 ABCA10Q8WWZ4 1543 aa36.38■■■■□ 3.41
SCARF2-201ENST00000494535 BIVM-ERCC5R4GMW8 1640 aa36.34■■■■□ 3.41
SCARF2-201ENST00000494535 FBLN2P98095 1184 aa36.32■■■■□ 3.4
SCARF2-201ENST00000494535 TOP2BQ02880 1626 aa36.32■■■■□ 3.4
SCARF2-201ENST00000494535 PBRM1Q86U86 1689 aa36.32■■■■□ 3.4
SCARF2-201ENST00000494535 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
SCARF2-201ENST00000494535 GAPVD1Q14C86 1478 aa36.3■■■■□ 3.4
SCARF2-201ENST00000494535 WRNQ14191 1432 aaPredicted RBP eCLIP36.26■■■■□ 3.4
SCARF2-201ENST00000494535 SYNJ2O15056 1496 aa36.25■■■■□ 3.39
SCARF2-201ENST00000494535 SYNJ1O43426 1573 aa36.21■■■■□ 3.39
SCARF2-201ENST00000494535 CLASP1Q7Z460 1538 aa36.2■■■■□ 3.39
SCARF2-201ENST00000494535 CHMP7Q8WUX9 453 aaPredicted RBP36.2■■■■□ 3.39
SCARF2-201ENST00000494535 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
SCARF2-201ENST00000494535 CYB5RLQ6IPT4 315 aa35.99■■■■□ 3.35
SCARF2-201ENST00000494535 ADAMTS12P58397 1594 aa35.98■■■■□ 3.35
SCARF2-201ENST00000494535 ERICH3Q5RHP9 1530 aa35.95■■■■□ 3.35
SCARF2-201ENST00000494535 GRIN2AQ12879 1464 aa35.92■■■■□ 3.34
SCARF2-201ENST00000494535 FHAD1B1AJZ9 1412 aa35.88■■■■□ 3.33
SCARF2-201ENST00000494535 NUP160Q12769 1436 aa35.82■■■■□ 3.32
SCARF2-201ENST00000494535 CEP170Q5SW79 1584 aa35.77■■■■□ 3.32
SCARF2-201ENST00000494535 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
SCARF2-201ENST00000494535 KIF27Q86VH2 1401 aa35.57■■■■□ 3.28
SCARF2-201ENST00000494535 ERCC6L2Q5T890 1561 aa35.55■■■■□ 3.28
SCARF2-201ENST00000494535 CUL7Q14999 1698 aa35.52■■■■□ 3.28
SCARF2-201ENST00000494535 IGF1RP08069 1367 aa35.49■■■■□ 3.27
SCARF2-201ENST00000494535 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
SCARF2-201ENST00000494535 TRHP20396 242 aaPredicted RBP35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms