RNA–Protein interactions for RNA: ENST00000494460.1

NCOR2-221, Transcript of nuclear receptor corepressor 2, humanhuman

TSL 3

Gene NCOR2, Length 339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR2-221ENST00000494460 NISCHQ9Y2I1 1504 aa47.02■■■■■ 5.12
NCOR2-221ENST00000494460 ABCC9O60706 1549 aa42.46■■■■■ 4.39
NCOR2-221ENST00000494460 CCDC180Q9P1Z9 1646 aa42.2■■■■■ 4.35
NCOR2-221ENST00000494460 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
NCOR2-221ENST00000494460 DCAF8L2P0C7V8 631 aa40.03■■■■■ 4
NCOR2-221ENST00000494460 NACADO15069 1562 aa39.97■■■■□ 3.99
NCOR2-221ENST00000494460 DNAJC5BQ9UF47 199 aa39.91■■■■□ 3.98
NCOR2-221ENST00000494460 PABPN1Q86U42 306 aaKnown RBP eCLIP39.58■■■■□ 3.93
NCOR2-221ENST00000494460 UNC13AQ9UPW8 1703 aa39.34■■■■□ 3.89
NCOR2-221ENST00000494460 MYO15BQ96JP2 1530 aa39.3■■■■□ 3.88
NCOR2-221ENST00000494460 BICRAQ9NZM4 1560 aa39.06■■■■□ 3.84
NCOR2-221ENST00000494460 ZCCHC6Q5VYS8 1495 aaKnown RBP38.91■■■■□ 3.82
NCOR2-221ENST00000494460 DCAF1Q9Y4B6 1507 aa38.77■■■■□ 3.8
NCOR2-221ENST00000494460 SCRIBQ14160 1630 aa38.56■■■■□ 3.76
NCOR2-221ENST00000494460 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
NCOR2-221ENST00000494460 CC2D2AQ9P2K1 1620 aa38.29■■■■□ 3.72
NCOR2-221ENST00000494460 CECR2Q9BXF3 1484 aa38.25■■■■□ 3.71
NCOR2-221ENST00000494460 EIF4G1Q04637 1599 aaKnown RBP38.16■■■■□ 3.7
NCOR2-221ENST00000494460 NCAPD3P42695 1498 aa36.89■■■■□ 3.5
NCOR2-221ENST00000494460 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
NCOR2-221ENST00000494460 DNAJC5Q9H3Z4 198 aa36.77■■■■□ 3.48
NCOR2-221ENST00000494460 ERCC6Q03468 1493 aa36.73■■■■□ 3.47
NCOR2-221ENST00000494460 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
NCOR2-221ENST00000494460 SMARCA2P51531 1590 aa36.69■■■■□ 3.46
NCOR2-221ENST00000494460 CUX2O14529 1486 aa36.59■■■■□ 3.45
NCOR2-221ENST00000494460 HMGXB3Q12766 1538 aa36.59■■■■□ 3.45
NCOR2-221ENST00000494460 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
NCOR2-221ENST00000494460 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
NCOR2-221ENST00000494460 NESP48681 1621 aa36.41■■■■□ 3.42
NCOR2-221ENST00000494460 PEG3Q9GZU2 1588 aa36.27■■■■□ 3.4
NCOR2-221ENST00000494460 MROH2BQ7Z745 1585 aa36.24■■■■□ 3.39
NCOR2-221ENST00000494460 LAMC3Q9Y6N6 1575 aa36.1■■■■□ 3.37
NCOR2-221ENST00000494460 THOC2Q8NI27 1593 aaKnown RBP35.98■■■■□ 3.35
NCOR2-221ENST00000494460 PDS5BQ9NTI5 1447 aa35.97■■■■□ 3.35
NCOR2-221ENST00000494460 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
NCOR2-221ENST00000494460 CADPSQ9ULU8 1353 aa35.82■■■■□ 3.32
NCOR2-221ENST00000494460 WIZO95785 1651 aa35.81■■■■□ 3.32
NCOR2-221ENST00000494460 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
NCOR2-221ENST00000494460 CEP164Q9UPV0 1460 aa35.48■■■■□ 3.27
NCOR2-221ENST00000494460 WDR62O43379 1518 aa35.48■■■■□ 3.27
NCOR2-221ENST00000494460 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
NCOR2-221ENST00000494460 FANCD2Q9BXW9 1451 aa35.42■■■■□ 3.26
NCOR2-221ENST00000494460 CFTRP13569 1480 aa35.34■■■■□ 3.25
NCOR2-221ENST00000494460 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
NCOR2-221ENST00000494460 TRIM41Q8WV44 630 aa35.25■■■■□ 3.23
NCOR2-221ENST00000494460 URB2Q14146 1524 aaKnown RBP35.1■■■■□ 3.21
NCOR2-221ENST00000494460 OSCARQ8IYS5 282 aa35.02■■■■□ 3.2
NCOR2-221ENST00000494460 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
NCOR2-221ENST00000494460 PRDM2Q13029 1718 aa34.95■■■■□ 3.19
NCOR2-221ENST00000494460 IFT140Q96RY7 1462 aa34.77■■■■□ 3.16
NCOR2-221ENST00000494460 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
NCOR2-221ENST00000494460 ZNF608Q9ULD9 1512 aaPredicted RBP34.71■■■■□ 3.15
NCOR2-221ENST00000494460 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
NCOR2-221ENST00000494460 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.12
NCOR2-221ENST00000494460 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
NCOR2-221ENST00000494460 RIMBP3CA6NJZ7 1639 aa34.47■■■■□ 3.11
NCOR2-221ENST00000494460 RIMBP3BA6NNM3 1639 aa34.47■■■■□ 3.11
NCOR2-221ENST00000494460 RIMBP3Q9UFD9 1639 aa34.47■■■■□ 3.11
NCOR2-221ENST00000494460 AQRO60306 1485 aaKnown RBP eCLIP34.42■■■■□ 3.13e-7■■■■■ 28.9
NCOR2-221ENST00000494460 FBLN2P98095 1184 aa34.38■■■■□ 3.09
NCOR2-221ENST00000494460 TARBP1Q13395 1621 aaKnown RBP34.36■■■■□ 3.09
NCOR2-221ENST00000494460 ARHGEF11O15085 1522 aa34.35■■■■□ 3.09
NCOR2-221ENST00000494460 POLA1P09884 1462 aaPredicted RBP34.34■■■■□ 3.09
NCOR2-221ENST00000494460 CHD1O14646 1710 aa34.27■■■■□ 3.08
NCOR2-221ENST00000494460 RAD54L2Q9Y4B4 1467 aa34.27■■■■□ 3.08
NCOR2-221ENST00000494460 SOGA1O94964 1423 aa34.26■■■■□ 3.07
NCOR2-221ENST00000494460 CYB5RLQ6IPT4 315 aa34.24■■■■□ 3.07
NCOR2-221ENST00000494460 TDRD9Q8NDG6 1382 aaKnown RBP34.22■■■■□ 3.07
NCOR2-221ENST00000494460 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
NCOR2-221ENST00000494460 SNAPC4Q5SXM2 1469 aa34.06■■■■□ 3.04
NCOR2-221ENST00000494460 CUX1P39880 1505 aa34.05■■■■□ 3.04
NCOR2-221ENST00000494460 CHMP7Q8WUX9 453 aaPredicted RBP34.05■■■■□ 3.04
NCOR2-221ENST00000494460 SUPT5HO00267 1087 aaKnown RBP34■■■■□ 3.03
NCOR2-221ENST00000494460 WDR97A6NE52 1622 aa34■■■■□ 3.03
NCOR2-221ENST00000494460 ARAP1Q96P48 1450 aa34■■■■□ 3.03
NCOR2-221ENST00000494460 TRHP20396 242 aaPredicted RBP33.98■■■■□ 3.03
NCOR2-221ENST00000494460 GRIN2BQ13224 1484 aa33.94■■■■□ 3.02
NCOR2-221ENST00000494460 MAGI1Q96QZ7 1491 aaPredicted RBP33.93■■■■□ 3.02
NCOR2-221ENST00000494460 SYNJ1O43426 1573 aa33.88■■■■□ 3.01
NCOR2-221ENST00000494460 CLASP1Q7Z460 1538 aa33.83■■■■□ 3.01
NCOR2-221ENST00000494460 SYNJ2O15056 1496 aa33.82■■■■□ 3.01
NCOR2-221ENST00000494460 GAPVD1Q14C86 1478 aa33.82■■■■□ 3
NCOR2-221ENST00000494460 PBRM1Q86U86 1689 aa33.76■■■□□ 2.99
NCOR2-221ENST00000494460 ABCA10Q8WWZ4 1543 aa33.71■■■□□ 2.99
NCOR2-221ENST00000494460 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
NCOR2-221ENST00000494460 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
NCOR2-221ENST00000494460 GRIN2AQ12879 1464 aa33.48■■■□□ 2.95
NCOR2-221ENST00000494460 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
NCOR2-221ENST00000494460 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.95
NCOR2-221ENST00000494460 ADAMTS12P58397 1594 aa33.42■■■□□ 2.94
NCOR2-221ENST00000494460 FHAD1B1AJZ9 1412 aa33.37■■■□□ 2.93
NCOR2-221ENST00000494460 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
NCOR2-221ENST00000494460 NUP160Q12769 1436 aa33.34■■■□□ 2.93
NCOR2-221ENST00000494460 ERCC6L2Q5T890 1561 aa33.33■■■□□ 2.93
NCOR2-221ENST00000494460 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
NCOR2-221ENST00000494460 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
NCOR2-221ENST00000494460 JPH4Q96JJ6 628 aa33.13■■■□□ 2.89
NCOR2-221ENST00000494460 PRG4Q92954 1404 aaPredicted RBP33.12■■■□□ 2.89
NCOR2-221ENST00000494460 AEBP2Q6ZN18 517 aaPredicted RBP33.1■■■□□ 2.89
NCOR2-221ENST00000494460 RUSC2Q8N2Y8 1516 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms