RNA–Protein interactions for RNA: ENST00000494443.5

EMD-209, Transcript of emerin, humanhuman

TSL 2

Gene EMD, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-209ENST00000494443 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
EMD-209ENST00000494443 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
EMD-209ENST00000494443 ABCC9O60706 1549 aa29.45■■■□□ 2.3
EMD-209ENST00000494443 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
EMD-209ENST00000494443 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
EMD-209ENST00000494443 NACADO15069 1562 aa28.26■■■□□ 2.11
EMD-209ENST00000494443 ZCCHC6Q5VYS8 1495 aaKnown RBP28.1■■■□□ 2.09
EMD-209ENST00000494443 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
EMD-209ENST00000494443 DCAF1Q9Y4B6 1507 aa27.93■■■□□ 2.06
EMD-209ENST00000494443 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
EMD-209ENST00000494443 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
EMD-209ENST00000494443 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
EMD-209ENST00000494443 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
EMD-209ENST00000494443 SHROOM4Q9ULL8 1493 aa27.15■■□□□ 1.94
EMD-209ENST00000494443 DNAJC5BQ9UF47 199 aa27.04■■□□□ 1.92
EMD-209ENST00000494443 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
EMD-209ENST00000494443 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
EMD-209ENST00000494443 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
EMD-209ENST00000494443 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
EMD-209ENST00000494443 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
EMD-209ENST00000494443 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
EMD-209ENST00000494443 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
EMD-209ENST00000494443 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
EMD-209ENST00000494443 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
EMD-209ENST00000494443 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
EMD-209ENST00000494443 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
EMD-209ENST00000494443 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
EMD-209ENST00000494443 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
EMD-209ENST00000494443 WIZO95785 1651 aa25.71■■□□□ 1.71
EMD-209ENST00000494443 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
EMD-209ENST00000494443 NESP48681 1621 aa25.44■■□□□ 1.66
EMD-209ENST00000494443 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
EMD-209ENST00000494443 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
EMD-209ENST00000494443 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
EMD-209ENST00000494443 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
EMD-209ENST00000494443 CCDC88BA6NC98 1476 aa25.19■■□□□ 1.62
EMD-209ENST00000494443 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
EMD-209ENST00000494443 CFTRP13569 1480 aa25.16■■□□□ 1.62
EMD-209ENST00000494443 CUX2O14529 1486 aa25.13■■□□□ 1.61
EMD-209ENST00000494443 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
EMD-209ENST00000494443 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
EMD-209ENST00000494443 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
EMD-209ENST00000494443 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
EMD-209ENST00000494443 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
EMD-209ENST00000494443 WDR62O43379 1518 aa24.86■■□□□ 1.57
EMD-209ENST00000494443 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
EMD-209ENST00000494443 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
EMD-209ENST00000494443 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
EMD-209ENST00000494443 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
EMD-209ENST00000494443 DNMBPQ6XZF7 1577 aa24.58■■□□□ 1.52
EMD-209ENST00000494443 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
EMD-209ENST00000494443 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
EMD-209ENST00000494443 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
EMD-209ENST00000494443 CUX1P39880 1505 aa24.4■■□□□ 1.5
EMD-209ENST00000494443 SOGA1O94964 1423 aa24.37■■□□□ 1.49
EMD-209ENST00000494443 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
EMD-209ENST00000494443 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
EMD-209ENST00000494443 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
EMD-209ENST00000494443 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
EMD-209ENST00000494443 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
EMD-209ENST00000494443 AQRO60306 1485 aaKnown RBP eCLIP24.25■■□□□ 1.471e-22■■■■■ 47.5
EMD-209ENST00000494443 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
EMD-209ENST00000494443 EIF4G3O43432 1585 aaKnown RBP24.23■■□□□ 1.47
EMD-209ENST00000494443 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
EMD-209ENST00000494443 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
EMD-209ENST00000494443 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
EMD-209ENST00000494443 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
EMD-209ENST00000494443 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
EMD-209ENST00000494443 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
EMD-209ENST00000494443 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
EMD-209ENST00000494443 FBLN2P98095 1184 aa24.06■■□□□ 1.44
EMD-209ENST00000494443 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
EMD-209ENST00000494443 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
EMD-209ENST00000494443 CHMP7Q8WUX9 453 aaPredicted RBP23.98■■□□□ 1.43
EMD-209ENST00000494443 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
EMD-209ENST00000494443 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
EMD-209ENST00000494443 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
EMD-209ENST00000494443 SYNJ2O15056 1496 aa23.9■■□□□ 1.42
EMD-209ENST00000494443 CHD1O14646 1710 aa23.89■■□□□ 1.41
EMD-209ENST00000494443 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
EMD-209ENST00000494443 KIF27Q86VH2 1401 aa23.81■■□□□ 1.4
EMD-209ENST00000494443 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
EMD-209ENST00000494443 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
EMD-209ENST00000494443 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
EMD-209ENST00000494443 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
EMD-209ENST00000494443 IGF1RP08069 1367 aa23.7■■□□□ 1.38
EMD-209ENST00000494443 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
EMD-209ENST00000494443 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
EMD-209ENST00000494443 RIMBP3CA6NJZ7 1639 aa23.65■■□□□ 1.38
EMD-209ENST00000494443 RIMBP3BA6NNM3 1639 aa23.65■■□□□ 1.38
EMD-209ENST00000494443 RIMBP3Q9UFD9 1639 aa23.65■■□□□ 1.38
EMD-209ENST00000494443 NUP160Q12769 1436 aa23.61■■□□□ 1.37
EMD-209ENST00000494443 CUL7Q14999 1698 aa23.58■■□□□ 1.37
EMD-209ENST00000494443 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.37
EMD-209ENST00000494443 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
EMD-209ENST00000494443 CYB5RLQ6IPT4 315 aa23.55■■□□□ 1.36
EMD-209ENST00000494443 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
EMD-209ENST00000494443 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
EMD-209ENST00000494443 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
EMD-209ENST00000494443 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms