RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
GPATCH4-207ENST00000494414 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
GPATCH4-207ENST00000494414 NISCHQ9Y2I1 1504 aa20.84■□□□□ 0.93
GPATCH4-207ENST00000494414 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
GPATCH4-207ENST00000494414 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
GPATCH4-207ENST00000494414 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
GPATCH4-207ENST00000494414 ABCC9O60706 1549 aa17.98■□□□□ 0.47
GPATCH4-207ENST00000494414 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
GPATCH4-207ENST00000494414 NACADO15069 1562 aa17.46■□□□□ 0.39
GPATCH4-207ENST00000494414 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
GPATCH4-207ENST00000494414 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
GPATCH4-207ENST00000494414 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
GPATCH4-207ENST00000494414 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
GPATCH4-207ENST00000494414 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
GPATCH4-207ENST00000494414 FOXD1Q16676 465 aa17.2■□□□□ 0.34
GPATCH4-207ENST00000494414 BICRAQ9NZM4 1560 aa17.02■□□□□ 0.32
GPATCH4-207ENST00000494414 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
GPATCH4-207ENST00000494414 DCAF8L2P0C7V8 631 aa16.89■□□□□ 0.29
GPATCH4-207ENST00000494414 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
GPATCH4-207ENST00000494414 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
GPATCH4-207ENST00000494414 ADRA2BP18089 450 aa16.57■□□□□ 0.24
GPATCH4-207ENST00000494414 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
GPATCH4-207ENST00000494414 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
GPATCH4-207ENST00000494414 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
GPATCH4-207ENST00000494414 CC2D2AQ9P2K1 1620 aa16.41■□□□□ 0.22
GPATCH4-207ENST00000494414 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
GPATCH4-207ENST00000494414 SMARCA4P51532 1647 aa16.22■□□□□ 0.19
GPATCH4-207ENST00000494414 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
GPATCH4-207ENST00000494414 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
GPATCH4-207ENST00000494414 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
GPATCH4-207ENST00000494414 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
GPATCH4-207ENST00000494414 NCAPD3P42695 1498 aa16.08■□□□□ 0.16
GPATCH4-207ENST00000494414 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
GPATCH4-207ENST00000494414 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
GPATCH4-207ENST00000494414 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
GPATCH4-207ENST00000494414 MSH5O43196 834 aa15.9■□□□□ 0.14
GPATCH4-207ENST00000494414 WIZO95785 1651 aa15.88■□□□□ 0.13
GPATCH4-207ENST00000494414 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
GPATCH4-207ENST00000494414 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
GPATCH4-207ENST00000494414 TOP2AP11388 1531 aaKnown RBP15.75■□□□□ 0.11
GPATCH4-207ENST00000494414 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
GPATCH4-207ENST00000494414 NESP48681 1621 aa15.61■□□□□ 0.09
GPATCH4-207ENST00000494414 PRDM2Q13029 1718 aa15.59■□□□□ 0.09
GPATCH4-207ENST00000494414 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.08
GPATCH4-207ENST00000494414 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
GPATCH4-207ENST00000494414 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
GPATCH4-207ENST00000494414 CFTRP13569 1480 aa15.51■□□□□ 0.07
GPATCH4-207ENST00000494414 CUX2O14529 1486 aa15.47■□□□□ 0.07
GPATCH4-207ENST00000494414 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
GPATCH4-207ENST00000494414 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
GPATCH4-207ENST00000494414 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
GPATCH4-207ENST00000494414 WDR62O43379 1518 aa15.41■□□□□ 0.06
GPATCH4-207ENST00000494414 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
GPATCH4-207ENST00000494414 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
GPATCH4-207ENST00000494414 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
GPATCH4-207ENST00000494414 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
GPATCH4-207ENST00000494414 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
GPATCH4-207ENST00000494414 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
GPATCH4-207ENST00000494414 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
GPATCH4-207ENST00000494414 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
GPATCH4-207ENST00000494414 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
GPATCH4-207ENST00000494414 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
GPATCH4-207ENST00000494414 CUX1P39880 1505 aa15.07■□□□□ 0
GPATCH4-207ENST00000494414 WDR97A6NE52 1622 aa15.06■□□□□ 0
GPATCH4-207ENST00000494414 SUPT5HO00267 1087 aaKnown RBP15.05■□□□□ -0
GPATCH4-207ENST00000494414 IFT140Q96RY7 1462 aa15.04■□□□□ -0
GPATCH4-207ENST00000494414 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
GPATCH4-207ENST00000494414 POLA1P09884 1462 aaPredicted RBP15.02■□□□□ -0
GPATCH4-207ENST00000494414 MAPK8IP2Q13387 824 aaPredicted RBP15.02■□□□□ -0
GPATCH4-207ENST00000494414 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
GPATCH4-207ENST00000494414 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
GPATCH4-207ENST00000494414 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
GPATCH4-207ENST00000494414 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
GPATCH4-207ENST00000494414 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
GPATCH4-207ENST00000494414 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
GPATCH4-207ENST00000494414 KCNA4P22459 653 aa14.93□□□□□ -0.02
GPATCH4-207ENST00000494414 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
GPATCH4-207ENST00000494414 RAD54L2Q9Y4B4 1467 aa14.88□□□□□ -0.03
GPATCH4-207ENST00000494414 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
GPATCH4-207ENST00000494414 PBRM1Q86U86 1689 aa14.87□□□□□ -0.03
GPATCH4-207ENST00000494414 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
GPATCH4-207ENST00000494414 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
GPATCH4-207ENST00000494414 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
GPATCH4-207ENST00000494414 SOGA1O94964 1423 aa14.83□□□□□ -0.03
GPATCH4-207ENST00000494414 CHD1O14646 1710 aa14.83□□□□□ -0.04
GPATCH4-207ENST00000494414 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.045e-7■■■■□ 19.7
GPATCH4-207ENST00000494414 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
GPATCH4-207ENST00000494414 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
GPATCH4-207ENST00000494414 GRIN2BQ13224 1484 aa14.75□□□□□ -0.05
GPATCH4-207ENST00000494414 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
GPATCH4-207ENST00000494414 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
GPATCH4-207ENST00000494414 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
GPATCH4-207ENST00000494414 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
GPATCH4-207ENST00000494414 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
GPATCH4-207ENST00000494414 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
GPATCH4-207ENST00000494414 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
GPATCH4-207ENST00000494414 NPM3O75607 178 aaKnown RBP14.65□□□□□ -0.06
GPATCH4-207ENST00000494414 CUL7Q14999 1698 aa14.61□□□□□ -0.07
GPATCH4-207ENST00000494414 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
GPATCH4-207ENST00000494414 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms