RNA–Protein interactions for RNA: ENST00000494377.7

PAX6-218, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,911 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-218ENST00000494377 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
PAX6-218ENST00000494377 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
PAX6-218ENST00000494377 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
PAX6-218ENST00000494377 ABCC9O60706 1549 aa22.37■■□□□ 1.17
PAX6-218ENST00000494377 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
PAX6-218ENST00000494377 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
PAX6-218ENST00000494377 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
PAX6-218ENST00000494377 NACADO15069 1562 aa21.38■■□□□ 1.01
PAX6-218ENST00000494377 ZCCHC6Q5VYS8 1495 aaKnown RBP21.24■□□□□ 0.99
PAX6-218ENST00000494377 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
PAX6-218ENST00000494377 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
PAX6-218ENST00000494377 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
PAX6-218ENST00000494377 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
PAX6-218ENST00000494377 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
PAX6-218ENST00000494377 SCRIBQ14160 1630 aa20.74■□□□□ 0.91
PAX6-218ENST00000494377 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
PAX6-218ENST00000494377 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
PAX6-218ENST00000494377 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
PAX6-218ENST00000494377 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
PAX6-218ENST00000494377 CECR2Q9BXF3 1484 aa20.1■□□□□ 0.81
PAX6-218ENST00000494377 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
PAX6-218ENST00000494377 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
PAX6-218ENST00000494377 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
PAX6-218ENST00000494377 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
PAX6-218ENST00000494377 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
PAX6-218ENST00000494377 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
PAX6-218ENST00000494377 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
PAX6-218ENST00000494377 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
PAX6-218ENST00000494377 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
PAX6-218ENST00000494377 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
PAX6-218ENST00000494377 WIZO95785 1651 aa19.46■□□□□ 0.71
PAX6-218ENST00000494377 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
PAX6-218ENST00000494377 NESP48681 1621 aa19.34■□□□□ 0.69
PAX6-218ENST00000494377 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
PAX6-218ENST00000494377 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
PAX6-218ENST00000494377 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
PAX6-218ENST00000494377 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
PAX6-218ENST00000494377 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
PAX6-218ENST00000494377 PDS5BQ9NTI5 1447 aa19.12■□□□□ 0.65
PAX6-218ENST00000494377 CUX2O14529 1486 aa19.08■□□□□ 0.64
PAX6-218ENST00000494377 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
PAX6-218ENST00000494377 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
PAX6-218ENST00000494377 CFTRP13569 1480 aa19.04■□□□□ 0.64
PAX6-218ENST00000494377 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
PAX6-218ENST00000494377 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
PAX6-218ENST00000494377 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
PAX6-218ENST00000494377 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
PAX6-218ENST00000494377 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
PAX6-218ENST00000494377 WDR62O43379 1518 aa18.85■□□□□ 0.61
PAX6-218ENST00000494377 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
PAX6-218ENST00000494377 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
PAX6-218ENST00000494377 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
PAX6-218ENST00000494377 POTEDQ86YR6 584 aa18.64■□□□□ 0.58
PAX6-218ENST00000494377 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
PAX6-218ENST00000494377 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
PAX6-218ENST00000494377 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.57
PAX6-218ENST00000494377 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
PAX6-218ENST00000494377 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
PAX6-218ENST00000494377 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
PAX6-218ENST00000494377 CUX1P39880 1505 aa18.47■□□□□ 0.55
PAX6-218ENST00000494377 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
PAX6-218ENST00000494377 SOGA1O94964 1423 aa18.42■□□□□ 0.54
PAX6-218ENST00000494377 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
PAX6-218ENST00000494377 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
PAX6-218ENST00000494377 AQRO60306 1485 aaKnown RBP eCLIP18.39■□□□□ 0.53
PAX6-218ENST00000494377 EIF4G3O43432 1585 aaKnown RBP18.37■□□□□ 0.53
PAX6-218ENST00000494377 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
PAX6-218ENST00000494377 FOXD1Q16676 465 aa18.35■□□□□ 0.53
PAX6-218ENST00000494377 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PAX6-218ENST00000494377 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
PAX6-218ENST00000494377 SYNJ1O43426 1573 aa18.27■□□□□ 0.51
PAX6-218ENST00000494377 TOP2BQ02880 1626 aa18.26■□□□□ 0.51
PAX6-218ENST00000494377 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
PAX6-218ENST00000494377 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
PAX6-218ENST00000494377 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
PAX6-218ENST00000494377 FBLN2P98095 1184 aa18.21■□□□□ 0.51
PAX6-218ENST00000494377 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
PAX6-218ENST00000494377 GAPVD1Q14C86 1478 aa18.19■□□□□ 0.5
PAX6-218ENST00000494377 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
PAX6-218ENST00000494377 CHD1O14646 1710 aa18.15■□□□□ 0.5
PAX6-218ENST00000494377 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.5
PAX6-218ENST00000494377 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
PAX6-218ENST00000494377 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
PAX6-218ENST00000494377 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
PAX6-218ENST00000494377 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
PAX6-218ENST00000494377 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
PAX6-218ENST00000494377 ARHGEF11O15085 1522 aa18■□□□□ 0.47
PAX6-218ENST00000494377 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
PAX6-218ENST00000494377 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
PAX6-218ENST00000494377 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
PAX6-218ENST00000494377 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
PAX6-218ENST00000494377 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
PAX6-218ENST00000494377 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
PAX6-218ENST00000494377 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
PAX6-218ENST00000494377 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
PAX6-218ENST00000494377 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
PAX6-218ENST00000494377 IGF1RP08069 1367 aa17.91■□□□□ 0.46
PAX6-218ENST00000494377 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
PAX6-218ENST00000494377 NUP160Q12769 1436 aa17.89■□□□□ 0.45
PAX6-218ENST00000494377 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms