RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 NISCHQ9Y2I1 1504 aa50.68■■■■■ 5.7
STX1A-212ENST00000494245 CCDC180Q9P1Z9 1646 aa44.9■■■■■ 4.78
STX1A-212ENST00000494245 ABCC9O60706 1549 aa43.09■■■■■ 4.49
STX1A-212ENST00000494245 ZCCHC6Q5VYS8 1495 aaKnown RBP42.37■■■■■ 4.37
STX1A-212ENST00000494245 DCAF1Q9Y4B6 1507 aa42.04■■■■■ 4.32
STX1A-212ENST00000494245 NACADO15069 1562 aa41.98■■■■■ 4.31
STX1A-212ENST00000494245 MYO15BQ96JP2 1530 aa41.97■■■■■ 4.31
STX1A-212ENST00000494245 DCAF8L2P0C7V8 631 aa41.93■■■■■ 4.3
STX1A-212ENST00000494245 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.29
STX1A-212ENST00000494245 UNC13AQ9UPW8 1703 aa40.96■■■■■ 4.15
STX1A-212ENST00000494245 SCRIBQ14160 1630 aa40.9■■■■■ 4.14
STX1A-212ENST00000494245 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
STX1A-212ENST00000494245 SHROOM4Q9ULL8 1493 aa40.31■■■■■ 4.04
STX1A-212ENST00000494245 PABPN1Q86U42 306 aaKnown RBP eCLIP40.3■■■■■ 4.04
STX1A-212ENST00000494245 EIF4G1Q04637 1599 aaKnown RBP39.41■■■■□ 3.9
STX1A-212ENST00000494245 CECR2Q9BXF3 1484 aa39.32■■■■□ 3.89
STX1A-212ENST00000494245 BAZ1AQ9NRL2 1556 aaPredicted RBP39.29■■■■□ 3.88
STX1A-212ENST00000494245 SMARCA4P51532 1647 aa39.22■■■■□ 3.87
STX1A-212ENST00000494245 CC2D2AQ9P2K1 1620 aa39.08■■■■□ 3.85
STX1A-212ENST00000494245 MROH2BQ7Z745 1585 aa39.03■■■■□ 3.84
STX1A-212ENST00000494245 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
STX1A-212ENST00000494245 PEG3Q9GZU2 1588 aa38.84■■■■□ 3.81
STX1A-212ENST00000494245 DNAJC5BQ9UF47 199 aa38.82■■■■□ 3.8
STX1A-212ENST00000494245 RSF1Q96T23 1441 aaPredicted RBP38.81■■■■□ 3.8
STX1A-212ENST00000494245 ATAD2BQ9ULI0 1458 aa38.78■■■■□ 3.8
STX1A-212ENST00000494245 WIZO95785 1651 aa38.69■■■■□ 3.78
STX1A-212ENST00000494245 NCAPD3P42695 1498 aa38.66■■■■□ 3.78
STX1A-212ENST00000494245 HMGXB3Q12766 1538 aa38.61■■■■□ 3.77
STX1A-212ENST00000494245 BAZ1BQ9UIG0 1483 aaKnown RBP38.53■■■■□ 3.76
STX1A-212ENST00000494245 TOP2AP11388 1531 aaKnown RBP38.35■■■■□ 3.73
STX1A-212ENST00000494245 SUPT5HO00267 1087 aaKnown RBP38.27■■■■□ 3.72
STX1A-212ENST00000494245 CCDC88BA6NC98 1476 aa37.82■■■■□ 3.64
STX1A-212ENST00000494245 LAMC3Q9Y6N6 1575 aa37.62■■■■□ 3.61
STX1A-212ENST00000494245 CADPSQ9ULU8 1353 aa37.56■■■■□ 3.6
STX1A-212ENST00000494245 CFTRP13569 1480 aa37.5■■■■□ 3.59
STX1A-212ENST00000494245 NESP48681 1621 aa37.48■■■■□ 3.59
STX1A-212ENST00000494245 PRDM2Q13029 1718 aa37.46■■■■□ 3.59
STX1A-212ENST00000494245 PDS5BQ9NTI5 1447 aa37.29■■■■□ 3.56
STX1A-212ENST00000494245 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
STX1A-212ENST00000494245 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
STX1A-212ENST00000494245 FANCD2Q9BXW9 1451 aa37.14■■■■□ 3.54
STX1A-212ENST00000494245 CEP164Q9UPV0 1460 aa37.07■■■■□ 3.53
STX1A-212ENST00000494245 THOC2Q8NI27 1593 aaKnown RBP36.87■■■■□ 3.49
STX1A-212ENST00000494245 MRC2Q9UBG0 1479 aa36.87■■■■□ 3.49
STX1A-212ENST00000494245 WDR62O43379 1518 aa36.74■■■■□ 3.47
STX1A-212ENST00000494245 ABCC8Q09428 1581 aa36.74■■■■□ 3.47
STX1A-212ENST00000494245 URB2Q14146 1524 aaKnown RBP36.71■■■■□ 3.47
STX1A-212ENST00000494245 DNMBPQ6XZF7 1577 aa36.7■■■■□ 3.47
STX1A-212ENST00000494245 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
STX1A-212ENST00000494245 WRNQ14191 1432 aaPredicted RBP eCLIP36.61■■■■□ 3.45
STX1A-212ENST00000494245 CUX1P39880 1505 aa36.59■■■■□ 3.45
STX1A-212ENST00000494245 CUX2O14529 1486 aa36.56■■■■□ 3.44
STX1A-212ENST00000494245 BIVM-ERCC5R4GMW8 1640 aa36.54■■■■□ 3.44
STX1A-212ENST00000494245 TOP2BQ02880 1626 aa36.52■■■■□ 3.44
STX1A-212ENST00000494245 SYNJ1O43426 1573 aa36.49■■■■□ 3.43
STX1A-212ENST00000494245 FGD5Q6ZNL6 1462 aa36.37■■■■□ 3.41
STX1A-212ENST00000494245 POLA1P09884 1462 aaPredicted RBP36.36■■■■□ 3.41
STX1A-212ENST00000494245 IFT140Q96RY7 1462 aa36.26■■■■□ 3.4
STX1A-212ENST00000494245 TARBP1Q13395 1621 aaKnown RBP36.2■■■■□ 3.39
STX1A-212ENST00000494245 SOGA1O94964 1423 aa36.2■■■■□ 3.39
STX1A-212ENST00000494245 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
STX1A-212ENST00000494245 RAD54L2Q9Y4B4 1467 aa36.14■■■■□ 3.38
STX1A-212ENST00000494245 WDR97A6NE52 1622 aa36.13■■■■□ 3.37
STX1A-212ENST00000494245 CHIC1Q5VXU3 224 aa36.13■■■■□ 3.37
STX1A-212ENST00000494245 ABCA10Q8WWZ4 1543 aa36.08■■■■□ 3.37
STX1A-212ENST00000494245 ZNF608Q9ULD9 1512 aaPredicted RBP35.96■■■■□ 3.35
STX1A-212ENST00000494245 EIF4G3O43432 1585 aaKnown RBP35.95■■■■□ 3.35
STX1A-212ENST00000494245 ABCA5Q8WWZ7 1642 aa35.9■■■■□ 3.34
STX1A-212ENST00000494245 TDRD9Q8NDG6 1382 aaKnown RBP35.87■■■■□ 3.33
STX1A-212ENST00000494245 AQRO60306 1485 aaKnown RBP eCLIP35.84■■■■□ 3.33
STX1A-212ENST00000494245 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
STX1A-212ENST00000494245 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
STX1A-212ENST00000494245 PBRM1Q86U86 1689 aa35.81■■■■□ 3.32
STX1A-212ENST00000494245 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
STX1A-212ENST00000494245 ERICH3Q5RHP9 1530 aa35.69■■■■□ 3.3
STX1A-212ENST00000494245 EEA1Q15075 1411 aa35.64■■■■□ 3.3
STX1A-212ENST00000494245 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
STX1A-212ENST00000494245 RUSC2Q8N2Y8 1516 aa35.6■■■■□ 3.29
STX1A-212ENST00000494245 SNAPC4Q5SXM2 1469 aa35.58■■■■□ 3.29
STX1A-212ENST00000494245 CUL7Q14999 1698 aa35.56■■■■□ 3.28
STX1A-212ENST00000494245 IGF1RP08069 1367 aa35.51■■■■□ 3.28
STX1A-212ENST00000494245 ADAMTS12P58397 1594 aa35.51■■■■□ 3.28
STX1A-212ENST00000494245 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
STX1A-212ENST00000494245 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
STX1A-212ENST00000494245 CHD1O14646 1710 aa35.4■■■■□ 3.26
STX1A-212ENST00000494245 CSRNP3Q8WYN3 585 aa35.37■■■■□ 3.25
STX1A-212ENST00000494245 CARMIL1Q5VZK9 1371 aa35.36■■■■□ 3.25
STX1A-212ENST00000494245 FAM9AQ8IZU1 332 aaPredicted RBP35.32■■■■□ 3.24
STX1A-212ENST00000494245 CHMP7Q8WUX9 453 aaPredicted RBP35.31■■■■□ 3.24
STX1A-212ENST00000494245 GRIN2AQ12879 1464 aa35.28■■■■□ 3.24
STX1A-212ENST00000494245 PRXQ9BXM0 1461 aa35.28■■■■□ 3.24
STX1A-212ENST00000494245 FBLN2P98095 1184 aa35.26■■■■□ 3.24
STX1A-212ENST00000494245 RAPGEF2Q9Y4G8 1499 aa35.26■■■■□ 3.23
STX1A-212ENST00000494245 KIF21BO75037 1637 aa35.21■■■■□ 3.23
STX1A-212ENST00000494245 NUP160Q12769 1436 aa35.08■■■■□ 3.21
STX1A-212ENST00000494245 OSCARQ8IYS5 282 aa35.07■■■■□ 3.2
STX1A-212ENST00000494245 CEP170Q5SW79 1584 aa35.07■■■■□ 3.2
STX1A-212ENST00000494245 GOLGA3Q08378 1498 aa35.03■■■■□ 3.2
STX1A-212ENST00000494245 CTTNBP2Q8WZ74 1663 aa35■■■■□ 3.19
STX1A-212ENST00000494245 CLASP1Q7Z460 1538 aa34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms